Wall clock time and date at job start Tue Mar 31 2020 17:20:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35420 * 119.57749 * 2 1 4 4 C 1.41902 * 117.83631 * 179.97438 * 3 2 1 5 5 O 1.22106 * 121.40715 * 179.97438 * 4 3 2 6 6 C 1.47199 * 117.18624 * 0.02562 * 4 3 2 7 7 C 1.47456 * 120.63143 * 179.97438 * 6 4 3 8 8 O 1.21532 * 119.99716 * 0.02562 * 7 6 4 9 9 O 1.34754 * 119.99550 * 179.97438 * 7 6 4 10 10 C 1.34837 * 116.99573 * 180.02562 * 9 7 6 11 11 H 1.07994 * 120.00344 * 359.97438 * 10 9 7 12 12 C 1.38833 * 120.00020 * 180.02562 * 10 9 7 13 13 N 1.31411 * 119.99837 * 359.97438 * 12 10 9 14 14 Si 1.86792 * 120.00386 * 180.02562 * 12 10 9 15 15 H 1.48500 * 109.47608 * 89.99498 * 14 12 10 16 16 H 1.48502 * 109.47356 * 210.00026 * 14 12 10 17 17 H 1.48505 * 109.47014 * 329.99648 * 14 12 10 18 18 N 1.31728 * 118.73768 * 359.97438 * 6 4 3 19 19 N 1.28193 * 122.07980 * 0.02562 * 18 6 4 20 20 C 1.39882 * 118.34300 * 179.97438 * 19 18 6 21 21 C 1.38950 * 120.06693 * 46.12200 * 20 19 18 22 22 C 1.38079 * 119.94964 * 179.78833 * 21 20 19 23 23 C 1.38294 * 120.08717 * 0.46985 * 22 21 20 24 24 C 1.38391 * 120.13732 * 359.78142 * 23 22 21 25 25 Cl 1.73602 * 119.97622 * 179.97438 * 24 23 22 26 26 C 1.38232 * 120.04844 * 359.97438 * 24 23 22 27 27 H 1.08997 * 109.47299 * 94.29684 * 1 2 3 28 28 H 1.08995 * 109.47298 * 214.30244 * 1 2 3 29 29 H 1.09006 * 109.47084 * 334.30008 * 1 2 3 30 30 H 1.08002 * 121.08086 * 0.25218 * 3 2 1 31 31 H 0.96996 * 119.99850 * 180.02562 * 13 12 10 32 32 H 1.08002 * 120.02801 * 0.02562 * 21 20 19 33 33 H 1.08000 * 119.95887 * 180.21235 * 22 21 20 34 34 H 1.08003 * 119.93173 * 179.76788 * 23 22 21 35 35 H 1.08001 * 120.04567 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1754 1.1777 0.0000 4 6 3.5938 1.1346 0.0006 5 8 4.2615 2.1570 0.0001 6 6 4.2262 -0.1946 0.0005 7 6 5.6947 -0.3279 0.0005 8 8 6.3950 0.6654 0.0010 9 8 6.2602 -1.5511 0.0010 10 6 7.6076 -1.6025 0.0015 11 1 8.1829 -0.6886 0.0011 12 6 8.2553 -2.8304 0.0015 13 7 7.5553 -3.9426 0.0015 14 14 10.1219 -2.9018 0.0029 15 1 10.6156 -2.9212 1.4033 16 1 10.5708 -4.1320 -0.6973 17 1 10.6634 -1.7088 -0.6963 18 7 3.4553 -1.2628 0.0005 19 7 2.1761 -1.1792 0.0000 20 6 1.4332 -2.3644 -0.0006 21 6 1.7694 -3.3972 0.8662 22 6 1.0317 -4.5644 0.8666 23 6 -0.0352 -4.7106 -0.0011 24 6 -0.3700 -3.6864 -0.8695 25 17 -1.7096 -3.8747 -1.9574 26 6 0.3616 -2.5135 -0.8712 27 1 -0.3634 -0.0770 -1.0247 28 1 -0.3633 -0.8489 0.5791 29 1 -0.3633 0.9261 0.4457 30 1 1.6462 2.1192 0.0041 31 1 8.0079 -4.8005 0.0018 32 1 2.6047 -3.2856 1.5416 33 1 1.2907 -5.3658 1.5426 34 1 -0.6082 -5.6261 -0.0012 35 1 0.1005 -1.7144 -1.5492 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000745224780.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:20:47 Heat of formation + Delta-G solvation = -7.100393 kcal Electronic energy + Delta-G solvation = -25474.127149 eV Core-core repulsion = 21466.001311 eV Total energy + Delta-G solvation = -4008.125838 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 334.055 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.21187 -39.59688 -38.71813 -37.82043 -36.80136 -35.08119 -34.71911 -33.25358 -32.21158 -31.26108 -29.78425 -28.51906 -26.15954 -24.96656 -23.65192 -22.92837 -22.10014 -21.04814 -18.77599 -18.47232 -17.63753 -16.94577 -16.63185 -16.31685 -15.84366 -15.34797 -15.19274 -14.74502 -14.50597 -14.35320 -14.22981 -13.94639 -13.91076 -13.44420 -13.28821 -13.25382 -12.81046 -12.52758 -12.18414 -11.90038 -11.81978 -11.67313 -11.39282 -11.26533 -11.15179 -10.55500 -10.44698 -10.05583 -9.89427 -9.55385 -9.46204 -9.18855 -8.80860 -8.63028 -7.98866 -6.49950 -4.09399 0.43616 0.74324 0.86769 1.31631 1.61412 2.09335 3.08351 3.12698 3.16876 3.23289 3.33033 3.68354 4.06663 4.10513 4.16925 4.28956 4.49727 4.57135 4.62298 4.72221 4.88111 4.97638 5.02697 5.06007 5.11272 5.26874 5.38976 5.51646 5.66558 5.74462 5.86632 5.89652 5.96613 6.16094 6.53007 6.79644 7.32953 7.86383 7.94000 8.09966 8.68125 8.97586 9.80887 10.66656 Molecular weight = 334.06amu Principal moments of inertia in cm(-1) A = 0.012065 B = 0.003705 C = 0.002961 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2320.230305 B = 7554.803697 C = 9453.322976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C 0.129 3.871 3 C -0.270 4.270 4 C 0.383 3.617 5 O -0.452 6.452 6 C 0.021 3.979 7 C 0.450 3.550 8 O -0.517 6.517 9 O -0.190 6.190 10 C -0.368 4.368 11 H 0.101 0.899 12 C 0.042 3.958 13 N -0.849 5.849 14 Si 0.946 3.054 15 H -0.271 1.271 16 H -0.277 1.277 17 H -0.264 1.264 18 N -0.165 5.165 19 N -0.277 5.277 20 C 0.141 3.859 21 C -0.083 4.083 22 C -0.088 4.088 23 C -0.103 4.103 24 C -0.024 4.024 25 Cl -0.061 7.061 26 C -0.115 4.115 27 H 0.092 0.908 28 H 0.085 0.915 29 H 0.095 0.905 30 H 0.164 0.836 31 H 0.272 0.728 32 H 0.147 0.853 33 H 0.146 0.854 34 H 0.141 0.859 35 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.244 -3.576 0.539 22.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.021 3.979 3 C -0.296 4.296 4 C 0.264 3.736 5 O -0.327 6.327 6 C -0.155 4.155 7 C 0.295 3.705 8 O -0.411 6.411 9 O -0.095 6.095 10 C -0.445 4.445 11 H 0.118 0.882 12 C -0.164 4.164 13 N -0.485 5.485 14 Si 0.770 3.230 15 H -0.197 1.197 16 H -0.202 1.202 17 H -0.188 1.188 18 N 0.007 4.993 19 N -0.069 5.069 20 C 0.051 3.949 21 C -0.103 4.103 22 C -0.107 4.107 23 C -0.122 4.122 24 C -0.051 4.051 25 Cl -0.032 7.032 26 C -0.135 4.135 27 H 0.111 0.889 28 H 0.104 0.896 29 H 0.114 0.886 30 H 0.182 0.818 31 H 0.082 0.918 32 H 0.165 0.835 33 H 0.164 0.836 34 H 0.159 0.841 35 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -21.686 -3.932 0.436 22.044 hybrid contribution 0.587 0.611 -0.186 0.867 sum -21.099 -3.321 0.250 21.360 Atomic orbital electron populations 1.21366 0.87549 1.05313 1.04247 1.21390 0.96094 0.85940 0.94514 1.22426 0.95227 0.97525 1.14429 1.18826 0.89039 0.88206 0.77538 1.90840 1.66942 1.35189 1.39696 1.24656 0.93616 0.90993 1.06250 1.19358 0.85011 0.83865 0.82248 1.90758 1.61263 1.38659 1.50422 1.83975 1.24086 1.27607 1.73841 1.21459 0.77641 0.94855 1.50510 0.88162 1.25429 1.00983 0.93887 0.96080 1.70003 1.36417 0.97691 1.44392 0.85620 0.80016 0.78421 0.78905 1.19689 1.20197 1.18809 1.71863 0.89551 1.30170 1.07738 1.41588 1.01910 1.04296 1.59077 1.17327 0.93270 0.86048 0.98259 1.21379 0.99576 0.92235 0.97127 1.21099 0.93848 0.97247 0.98466 1.21229 0.97845 0.98335 0.94791 1.20526 0.93066 0.95438 0.96100 1.98390 1.44419 1.97503 1.62860 1.21036 0.95944 0.98039 0.98520 0.88940 0.89639 0.88644 0.81845 0.91839 0.83518 0.83601 0.84132 0.83659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.91 8.19 36.00 0.29 -0.61 16 2 C 0.13 1.61 6.50 -81.94 -0.53 1.08 16 3 C -0.27 -3.97 9.72 -39.19 -0.38 -4.35 16 4 C 0.38 7.96 6.99 -34.54 -0.24 7.72 16 5 O -0.45 -11.01 16.43 -15.17 -0.25 -11.26 16 6 C 0.02 0.47 7.04 -80.52 -0.57 -0.09 16 7 C 0.45 12.49 7.89 34.49 0.27 12.77 16 8 O -0.52 -15.60 14.82 -26.07 -0.39 -15.98 16 9 O -0.19 -5.68 9.58 -21.65 -0.21 -5.88 16 10 C -0.37 -11.02 9.65 30.95 0.30 -10.72 16 11 H 0.10 3.02 6.86 -52.49 -0.36 2.66 16 12 C 0.04 1.17 5.50 -17.51 -0.10 1.08 16 13 N -0.85 -24.40 13.67 55.49 0.76 -23.64 16 14 Si 0.95 21.12 29.55 -169.99 -5.02 16.10 16 15 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 16 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 17 H -0.26 -5.83 7.11 56.52 0.40 -5.43 16 18 N -0.17 -3.29 10.26 34.57 0.35 -2.94 16 19 N -0.28 -4.17 3.40 -6.92 -0.02 -4.19 16 20 C 0.14 1.73 5.11 -83.68 -0.43 1.30 16 21 C -0.08 -0.98 9.60 -39.38 -0.38 -1.35 16 22 C -0.09 -0.77 10.04 -39.62 -0.40 -1.16 16 23 C -0.10 -0.81 9.83 -39.50 -0.39 -1.20 16 24 C -0.02 -0.21 6.32 -39.53 -0.25 -0.46 16 25 Cl -0.06 -0.48 28.95 -51.86 -1.50 -1.98 16 26 C -0.11 -1.11 7.32 -39.35 -0.29 -1.40 16 27 H 0.09 0.51 6.69 -51.93 -0.35 0.16 16 28 H 0.08 0.56 6.36 -51.93 -0.33 0.23 16 29 H 0.09 0.50 8.04 -51.93 -0.42 0.08 16 30 H 0.16 1.88 8.06 -52.49 -0.42 1.46 16 31 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 32 H 0.15 1.91 8.01 -52.49 -0.42 1.49 16 33 H 0.15 0.93 8.06 -52.49 -0.42 0.51 16 34 H 0.14 0.79 8.06 -52.48 -0.42 0.37 16 35 H 0.15 1.20 5.87 -52.49 -0.31 0.89 16 LS Contribution 331.98 15.07 5.00 5.00 Total: -1.00 -37.03 331.98 -6.94 -43.98 By element: Atomic # 1 Polarization: 0.79 SS G_CDS: -2.59 Total: -1.79 kcal Atomic # 6 Polarization: 5.67 SS G_CDS: -3.08 Total: 2.59 kcal Atomic # 7 Polarization: -31.86 SS G_CDS: 1.09 Total: -30.77 kcal Atomic # 8 Polarization: -32.28 SS G_CDS: -0.84 Total: -33.12 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.02 Total: 16.10 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.50 Total: -1.98 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -37.03 -6.94 -43.98 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000745224780.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.875 kcal (2) G-P(sol) polarization free energy of solvation -37.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds