Wall clock time and date at job start Tue Mar 31 2020 17:15:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39933 * 120.04486 * 45.88007 * 3 2 1 5 5 F 1.35101 * 120.02199 * 359.97438 * 4 3 2 6 6 C 1.37996 * 119.95870 * 180.02562 * 4 3 2 7 7 C 1.39576 * 120.04276 * 359.97438 * 6 4 3 8 8 C 1.47937 * 119.95805 * 179.97438 * 7 6 4 9 9 O 1.21542 * 120.00048 * 0.02562 * 8 7 6 10 10 N 1.34781 * 119.99966 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99732 * 180.02562 * 10 8 7 12 12 H 1.09000 * 109.47381 * 35.00069 * 11 10 8 13 13 C 1.50699 * 109.46939 * 155.00269 * 11 10 8 14 14 H 1.08003 * 120.00271 * 359.97438 * 13 11 10 15 15 C 1.37879 * 120.00161 * 179.97438 * 13 11 10 16 16 N 1.31509 * 119.99895 * 0.02562 * 15 13 11 17 17 Si 1.86803 * 120.00268 * 179.97438 * 15 13 11 18 18 H 1.48500 * 109.46959 * 90.00076 * 17 15 13 19 19 H 1.48491 * 109.47193 * 210.00468 * 17 15 13 20 20 H 1.48498 * 109.46715 * 330.00553 * 17 15 13 21 21 C 1.53006 * 109.47249 * 274.99921 * 11 10 8 22 22 F 1.39900 * 109.46764 * 60.00158 * 21 11 10 23 23 F 1.39897 * 109.47129 * 180.02562 * 21 11 10 24 24 F 1.39903 * 109.46814 * 300.00629 * 21 11 10 25 25 C 1.39576 * 120.08303 * 0.27539 * 7 6 4 26 26 C 1.38001 * 120.04524 * 359.48994 * 25 7 6 27 27 F 1.35094 * 120.02457 * 180.27753 * 26 25 7 28 28 H 1.07998 * 119.97816 * 180.02562 * 6 4 3 29 29 H 0.96998 * 119.99903 * 0.02562 * 10 8 7 30 30 H 0.97006 * 120.00358 * 179.97438 * 16 15 13 31 31 H 1.08000 * 119.97371 * 179.71916 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2690 -0.8423 -0.8696 5 9 2.5952 -1.6581 -1.7097 6 6 4.6489 -0.8406 -0.8677 7 6 5.3455 0.0015 0.0004 8 6 6.8249 0.0014 0.0012 9 8 7.4329 -0.7314 -0.7540 10 7 7.4984 0.8147 0.8388 11 6 8.9634 0.8149 0.8392 12 1 9.3270 0.6514 -0.1752 13 6 9.4653 2.1428 1.3449 14 1 8.7633 2.9101 1.6365 15 6 10.8208 2.3784 1.4354 16 7 11.6757 1.4444 1.0800 17 14 11.4431 4.0247 2.0616 18 1 11.6070 3.9634 3.5363 19 1 12.7515 4.3319 1.4304 20 1 10.4650 5.0873 1.7160 21 6 9.4734 -0.3035 1.7503 22 9 9.0074 -1.5363 1.2808 23 9 10.8723 -0.3029 1.7511 24 9 9.0065 -0.0937 3.0523 25 6 4.6481 0.8393 0.8722 26 6 3.2681 0.8440 0.8699 27 9 2.5935 1.6591 1.7099 28 1 5.1902 -1.4908 -1.5390 29 1 7.0131 1.3998 1.4413 30 1 12.6294 1.6102 1.1433 31 1 5.1889 1.4869 1.5464 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000928804352.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:15:57 Heat of formation + Delta-G solvation = -214.653087 kcal Electronic energy + Delta-G solvation = -28284.970289 eV Core-core repulsion = 23174.190870 eV Total energy + Delta-G solvation = -5110.779419 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.048 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -50.36012 -50.35898 -50.33062 -47.99250 -47.67247 -41.35878 -39.54058 -37.76440 -36.59650 -34.57712 -33.04527 -31.80006 -30.24286 -26.74689 -26.37154 -24.26634 -23.48048 -21.97467 -20.68990 -20.08652 -18.96340 -18.85424 -18.65099 -18.55949 -18.02995 -17.46180 -17.38651 -16.92787 -16.70537 -16.60584 -16.22781 -16.00617 -15.69049 -15.10743 -14.92811 -14.92040 -14.85643 -14.55235 -14.45169 -14.38700 -14.24631 -14.07766 -13.93904 -13.81314 -13.48178 -13.13743 -13.06318 -12.95543 -12.70244 -12.62277 -12.17889 -11.54209 -11.19756 -10.65713 -10.48013 -10.11155 -10.10581 -8.17705 -6.47862 -1.16849 -0.34085 1.08187 1.22962 1.51922 1.53299 1.63255 1.85956 1.91636 2.26140 2.35248 2.37722 2.43521 2.60009 2.90428 2.99195 3.32512 3.45167 3.69752 3.82288 3.89880 4.08196 4.20129 4.29289 4.35490 4.55742 4.85817 4.94916 5.20992 5.32751 5.55443 5.68517 6.06302 6.54502 6.59303 7.12122 7.26465 8.74515 Molecular weight = 334.05amu Principal moments of inertia in cm(-1) A = 0.018605 B = 0.003407 C = 0.003117 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1504.637095 B = 8216.204395 C = 8981.891476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.267 3.733 3 C -0.075 4.075 4 C 0.182 3.818 5 F -0.116 7.116 6 C -0.097 4.097 7 C -0.036 4.036 8 C 0.547 3.453 9 O -0.553 6.553 10 N -0.693 5.693 11 C 0.251 3.749 12 H 0.058 0.942 13 C -0.560 4.560 14 H 0.098 0.902 15 C 0.018 3.982 16 N -0.873 5.873 17 Si 0.978 3.022 18 H -0.277 1.277 19 H -0.287 1.287 20 H -0.255 1.255 21 C 0.412 3.588 22 F -0.217 7.217 23 F -0.151 7.151 24 F -0.202 7.202 25 C -0.112 4.112 26 C 0.186 3.814 27 F -0.113 7.113 28 H 0.170 0.830 29 H 0.417 0.583 30 H 0.268 0.732 31 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.271 0.397 -0.039 12.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.093 5.093 2 C -0.049 4.049 3 C -0.080 4.080 4 C 0.160 3.840 5 F -0.094 7.094 6 C -0.117 4.117 7 C -0.040 4.040 8 C 0.334 3.666 9 O -0.432 6.432 10 N -0.344 5.344 11 C 0.145 3.855 12 H 0.075 0.925 13 C -0.597 4.597 14 H 0.116 0.884 15 C -0.188 4.188 16 N -0.507 5.507 17 Si 0.802 3.198 18 H -0.202 1.202 19 H -0.213 1.213 20 H -0.178 1.178 21 C 0.356 3.644 22 F -0.199 7.199 23 F -0.133 7.133 24 F -0.184 7.184 25 C -0.131 4.131 26 C 0.163 3.837 27 F -0.091 7.091 28 H 0.188 0.812 29 H 0.256 0.744 30 H 0.078 0.922 31 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -13.429 -0.183 -0.574 13.443 hybrid contribution 0.755 0.381 0.666 1.077 sum -12.674 0.198 0.092 12.676 Atomic orbital electron populations 1.81265 1.12429 1.07854 1.07795 1.25057 0.92051 0.93890 0.93899 1.15952 0.84844 1.03919 1.03308 1.16817 0.88851 0.89463 0.88892 1.91611 1.80047 1.69584 1.68163 1.21204 0.90944 0.99703 0.99863 1.19508 0.91942 0.96384 0.96186 1.18486 0.87406 0.80157 0.80587 1.90822 1.70170 1.41138 1.41045 1.45839 1.06909 1.41672 1.39982 1.19429 0.77803 0.92911 0.95401 0.92466 1.21243 0.92969 0.97849 1.47607 0.88379 1.25920 0.96995 1.01015 0.94855 1.70515 1.03244 1.33059 1.43879 0.85229 0.77790 0.78676 0.78087 1.20242 1.21310 1.17822 1.23320 0.77510 0.82960 0.80638 1.93069 1.89113 1.49170 1.88590 1.93385 1.27870 1.95817 1.96188 1.92999 1.88921 1.94998 1.41461 1.21453 0.91366 1.00192 1.00108 1.16820 0.89031 0.89205 0.88602 1.91625 1.80054 1.69433 1.67992 0.81213 0.74400 0.92234 0.79930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -10.51 18.54 19.00 0.35 -10.16 16 2 C 0.27 5.58 14.59 88.33 1.29 6.87 16 3 C -0.07 -1.26 5.75 -21.21 -0.12 -1.39 16 4 C 0.18 3.08 7.27 22.62 0.16 3.25 16 5 F -0.12 -2.14 16.80 44.97 0.76 -1.38 16 6 C -0.10 -1.81 9.55 22.54 0.22 -1.59 16 7 C -0.04 -0.74 5.87 -20.06 -0.12 -0.86 16 8 C 0.55 17.01 7.31 86.81 0.63 17.64 16 9 O -0.55 -21.77 14.90 -3.85 -0.06 -21.83 16 10 N -0.69 -22.67 4.94 -448.87 -2.22 -24.89 16 11 C 0.25 11.04 2.21 44.25 0.10 11.13 16 12 H 0.06 2.91 7.58 -2.39 -0.02 2.89 16 13 C -0.56 -25.17 8.46 25.60 0.22 -24.95 16 14 H 0.10 3.94 7.74 -2.91 -0.02 3.92 16 15 C 0.02 0.85 5.20 84.66 0.44 1.29 16 16 N -0.87 -45.21 9.50 21.45 0.20 -45.00 16 17 Si 0.98 37.54 29.54 68.60 2.03 39.57 16 18 H -0.28 -10.60 7.11 99.48 0.71 -9.89 16 19 H -0.29 -11.18 7.11 99.48 0.71 -10.47 16 20 H -0.25 -9.08 7.11 99.48 0.71 -8.37 16 21 C 0.41 19.22 2.81 71.98 0.20 19.43 16 22 F -0.22 -10.03 15.68 44.97 0.70 -9.32 16 23 F -0.15 -7.93 12.91 44.97 0.58 -7.35 16 24 F -0.20 -8.86 16.94 44.97 0.76 -8.10 16 25 C -0.11 -1.70 9.50 22.54 0.21 -1.49 16 26 C 0.19 2.84 7.27 22.62 0.16 3.01 16 27 F -0.11 -1.86 16.80 44.97 0.76 -1.11 16 28 H 0.17 3.21 7.63 -2.91 -0.02 3.19 16 29 H 0.42 10.49 6.55 -92.71 -0.61 9.88 16 30 H 0.27 13.28 8.31 -92.70 -0.77 12.51 16 31 H 0.18 2.02 6.38 -2.91 -0.02 2.00 16 Total: -1.00 -59.50 307.83 7.93 -51.58 By element: Atomic # 1 Polarization: 4.99 SS G_CDS: 0.66 Total: 5.65 kcal Atomic # 6 Polarization: 28.94 SS G_CDS: 3.40 Total: 32.34 kcal Atomic # 7 Polarization: -78.39 SS G_CDS: -1.66 Total: -80.05 kcal Atomic # 8 Polarization: -21.77 SS G_CDS: -0.06 Total: -21.83 kcal Atomic # 9 Polarization: -30.81 SS G_CDS: 3.56 Total: -27.25 kcal Atomic # 14 Polarization: 37.54 SS G_CDS: 2.03 Total: 39.57 kcal Total: -59.50 7.93 -51.58 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928804352.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.077 kcal (2) G-P(sol) polarization free energy of solvation -59.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -222.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.928 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds