Wall clock time and date at job start Tue Mar 31 2020 17:16:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39617 * 119.96238 * 260.27927 * 3 2 1 5 5 C 1.38002 * 120.03818 * 179.72285 * 4 3 2 6 6 F 1.35103 * 120.01730 * 180.29441 * 5 4 3 7 7 C 1.39926 * 119.95909 * 0.53236 * 5 4 3 8 8 C 1.47626 * 120.03615 * 179.76633 * 7 5 4 9 9 O 1.21580 * 120.00038 * 269.97639 * 8 7 5 10 10 N 1.34780 * 120.00117 * 89.97721 * 8 7 5 11 11 C 1.46496 * 119.99997 * 180.02562 * 10 8 7 12 12 H 1.08996 * 109.47640 * 34.99895 * 11 10 8 13 13 C 1.50703 * 109.46943 * 154.99805 * 11 10 8 14 14 H 1.07998 * 120.00434 * 0.02562 * 13 11 10 15 15 C 1.37878 * 119.99599 * 179.97438 * 13 11 10 16 16 N 1.31513 * 120.00635 * 359.97438 * 15 13 11 17 17 Si 1.86802 * 119.99634 * 180.02562 * 15 13 11 18 18 H 1.48503 * 109.47275 * 90.00310 * 17 15 13 19 19 H 1.48503 * 109.46990 * 209.99945 * 17 15 13 20 20 H 1.48498 * 109.47465 * 329.99868 * 17 15 13 21 21 C 1.52996 * 109.47172 * 274.99608 * 11 10 8 22 22 F 1.39906 * 109.47174 * 59.99948 * 21 11 10 23 23 F 1.39895 * 109.47591 * 180.02562 * 21 11 10 24 24 F 1.39898 * 109.47277 * 300.00337 * 21 11 10 25 25 C 1.39926 * 119.92947 * 359.74107 * 7 5 4 26 26 F 1.35102 * 120.02257 * 180.02562 * 25 7 5 27 27 C 1.38003 * 119.95960 * 0.02562 * 25 7 5 28 28 H 1.08007 * 119.98012 * 359.97438 * 4 3 2 29 29 H 0.97003 * 119.99467 * 359.97438 * 10 8 7 30 30 H 0.96993 * 120.00125 * 179.97438 * 16 15 13 31 31 H 1.08005 * 119.98365 * 179.97438 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2652 0.2052 1.1922 5 6 4.6452 0.2004 1.1950 6 9 5.3194 0.3925 2.3499 7 6 5.3457 0.0015 0.0001 8 6 6.8219 0.0012 0.0003 9 8 7.4301 1.0397 -0.1728 10 7 7.4956 -1.1502 0.1924 11 6 8.9606 -1.1504 0.1931 12 1 9.3239 -0.2233 0.6364 13 6 9.4624 -2.3220 0.9972 14 1 8.7603 -2.9990 1.4609 15 6 10.8178 -2.5301 1.1399 16 7 11.6729 -1.7066 0.5740 17 14 11.4398 -3.9828 2.1361 18 1 11.6047 -5.1596 1.2454 19 1 12.7480 -3.6389 2.7491 20 1 10.4614 -4.3049 3.2057 21 6 9.4713 -1.2625 -1.2448 22 9 9.0054 -0.1749 -1.9913 23 9 10.8702 -1.2633 -1.2441 24 9 9.0051 -2.4525 -1.8138 25 6 4.6454 -0.1976 -1.1948 26 9 5.3199 -0.3904 -2.3495 27 6 3.2654 -0.1971 -1.1932 28 1 2.7241 0.3632 2.1135 29 1 7.0104 -1.9787 0.3308 30 1 12.6264 -1.8529 0.6748 31 1 2.7245 -0.3503 -2.1154 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928807104.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:16:10 Heat of formation + Delta-G solvation = -198.982708 kcal Electronic energy + Delta-G solvation = -28859.930832 eV Core-core repulsion = 23749.830932 eV Total energy + Delta-G solvation = -5110.099900 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.048 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -49.30509 -49.27645 -48.41850 -46.07083 -45.68159 -39.95057 -38.74765 -36.72842 -34.86128 -32.80770 -31.95154 -31.01037 -28.59291 -25.56392 -24.61915 -23.39044 -21.96327 -20.40158 -19.96406 -18.43681 -17.86394 -17.01787 -16.87760 -16.86591 -16.67319 -16.40555 -16.11593 -15.83502 -15.56099 -15.44158 -14.98117 -14.57057 -14.30646 -13.99881 -13.88817 -13.77037 -13.32054 -12.99279 -12.76792 -12.70005 -12.51503 -12.45701 -12.35379 -12.30612 -12.12968 -12.04902 -11.88674 -11.25719 -10.95060 -10.89817 -10.51207 -9.78867 -9.75654 -9.41630 -9.29611 -8.81991 -8.48348 -6.30796 -4.55863 -0.13127 0.45874 2.10659 2.17625 2.67466 2.96392 3.10278 3.15385 3.21292 3.23648 3.38962 3.54419 3.93592 4.14165 4.31643 4.32871 4.46798 4.65421 4.79163 4.86179 5.25224 5.26194 5.41731 5.47078 5.73474 5.78147 6.08692 6.10487 6.76165 6.90650 6.92054 7.33122 7.54716 8.01675 8.35805 8.54793 9.12189 10.60720 Molecular weight = 334.05amu Principal moments of inertia in cm(-1) A = 0.018101 B = 0.003875 C = 0.003524 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1546.496837 B = 7224.703470 C = 7943.201390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.395 5.395 2 C 0.256 3.744 3 C 0.042 3.958 4 C -0.120 4.120 5 C 0.169 3.831 6 F -0.108 7.108 7 C -0.161 4.161 8 C 0.551 3.449 9 O -0.508 6.508 10 N -0.693 5.693 11 C 0.244 3.756 12 H 0.089 0.911 13 C -0.554 4.554 14 H 0.079 0.921 15 C 0.066 3.934 16 N -0.838 5.838 17 Si 0.917 3.083 18 H -0.276 1.276 19 H -0.282 1.282 20 H -0.269 1.269 21 C 0.417 3.583 22 F -0.217 7.217 23 F -0.135 7.135 24 F -0.207 7.207 25 C 0.169 3.831 26 F -0.108 7.108 27 C -0.120 4.120 28 H 0.159 0.841 29 H 0.402 0.598 30 H 0.270 0.730 31 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.781 0.909 -0.253 13.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.069 5.069 2 C -0.060 4.060 3 C 0.038 3.962 4 C -0.141 4.141 5 C 0.149 3.851 6 F -0.086 7.086 7 C -0.167 4.167 8 C 0.333 3.667 9 O -0.383 6.383 10 N -0.342 5.342 11 C 0.139 3.861 12 H 0.107 0.893 13 C -0.591 4.591 14 H 0.098 0.902 15 C -0.143 4.143 16 N -0.471 5.471 17 Si 0.743 3.257 18 H -0.202 1.202 19 H -0.207 1.207 20 H -0.194 1.194 21 C 0.361 3.639 22 F -0.199 7.199 23 F -0.116 7.116 24 F -0.189 7.189 25 C 0.148 3.852 26 F -0.086 7.086 27 C -0.141 4.141 28 H 0.177 0.823 29 H 0.237 0.763 30 H 0.080 0.920 31 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -14.770 1.711 -0.435 14.875 hybrid contribution 0.973 -1.135 0.153 1.503 sum -13.797 0.576 -0.282 13.812 Atomic orbital electron populations 1.81307 1.11632 1.07422 1.06563 1.25213 0.92048 0.94391 0.94336 1.15263 0.84773 1.02883 0.93269 1.21052 0.91771 1.02168 0.99129 1.16930 0.88889 0.98410 0.80918 1.91653 1.80005 1.91609 1.45371 1.20470 0.96566 1.06778 0.92849 1.17739 0.85172 0.85309 0.78433 1.90869 1.68210 1.31461 1.47717 1.46073 1.08639 1.09098 1.70390 1.19863 0.75078 1.03096 0.88054 0.89343 1.20848 0.92610 1.11179 1.34438 0.90250 1.25079 0.96476 0.97514 0.95256 1.70390 1.03122 1.35661 1.37926 0.86183 0.78376 0.81301 0.79839 1.20156 1.20739 1.19401 1.23075 0.78124 0.71695 0.91042 1.93081 1.89231 1.56856 1.80687 1.93413 1.26381 1.95750 1.96042 1.92997 1.89132 1.49368 1.87437 1.16963 0.88923 0.98207 0.81107 1.91667 1.79975 1.91548 1.45368 1.21057 0.91756 1.02178 0.99111 0.82288 0.76324 0.91971 0.82294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -4.17 18.54 41.83 0.78 -3.40 16 2 C 0.26 2.13 15.31 -22.47 -0.34 1.78 16 3 C 0.04 0.31 5.73 -106.94 -0.61 -0.30 16 4 C -0.12 -0.92 9.71 -39.15 -0.38 -1.30 16 5 C 0.17 1.88 7.28 -39.04 -0.28 1.60 16 6 F -0.11 -1.41 16.82 2.25 0.04 -1.37 16 7 C -0.16 -2.19 5.64 -104.80 -0.59 -2.78 16 8 C 0.55 10.37 6.05 -12.43 -0.08 10.29 16 9 O -0.51 -11.51 15.68 5.30 0.08 -11.43 16 10 N -0.69 -13.49 4.98 -55.95 -0.28 -13.77 16 11 C 0.24 5.81 2.21 -69.08 -0.15 5.66 16 12 H 0.09 2.35 7.58 -51.93 -0.39 1.96 16 13 C -0.55 -13.54 8.47 -34.44 -0.29 -13.83 16 14 H 0.08 1.82 7.74 -52.49 -0.41 1.41 16 15 C 0.07 1.66 5.20 -17.82 -0.09 1.57 16 16 N -0.84 -22.28 9.50 55.43 0.53 -21.75 16 17 Si 0.92 19.44 29.54 -169.99 -5.02 14.42 16 18 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 19 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 20 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 21 C 0.42 10.36 2.81 37.16 0.10 10.46 16 22 F -0.22 -5.35 15.67 2.25 0.04 -5.31 16 23 F -0.13 -3.63 12.91 2.25 0.03 -3.60 16 24 F -0.21 -4.95 16.94 2.25 0.04 -4.91 16 25 C 0.17 1.94 7.28 -39.04 -0.28 1.66 16 26 F -0.11 -1.50 16.82 2.25 0.04 -1.46 16 27 C -0.12 -0.94 9.71 -39.15 -0.38 -1.32 16 28 H 0.16 0.82 8.06 -52.48 -0.42 0.40 16 29 H 0.40 6.67 8.52 -40.82 -0.35 6.32 16 30 H 0.27 6.80 8.31 -40.82 -0.34 6.46 16 31 H 0.16 0.86 8.06 -52.48 -0.42 0.44 16 LS Contribution 312.36 15.07 4.71 4.71 Total: -1.00 -30.05 312.36 -3.54 -33.59 By element: Atomic # 1 Polarization: 1.92 SS G_CDS: -1.13 Total: 0.80 kcal Atomic # 6 Polarization: 16.88 SS G_CDS: -3.38 Total: 13.49 kcal Atomic # 7 Polarization: -39.94 SS G_CDS: 1.02 Total: -38.92 kcal Atomic # 8 Polarization: -11.51 SS G_CDS: 0.08 Total: -11.43 kcal Atomic # 9 Polarization: -16.84 SS G_CDS: 0.18 Total: -16.66 kcal Atomic # 14 Polarization: 19.44 SS G_CDS: -5.02 Total: 14.42 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -30.05 -3.54 -33.59 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928807104.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.391 kcal (2) G-P(sol) polarization free energy of solvation -30.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -195.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.592 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds