Wall clock time and date at job start Tue Mar 31 2020 18:44:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 F 1.39901 * 110.62599 * 111.97574 * 3 2 1 5 5 C 1.55142 * 110.85465 * 348.76622 * 3 2 1 6 6 C 1.54912 * 101.65016 * 205.89357 * 5 3 2 7 7 N 1.47842 * 104.79742 * 37.06909 * 6 5 3 8 8 C 1.46894 * 111.00242 * 213.63619 * 7 6 5 9 9 C 1.53002 * 109.47151 * 290.84449 * 8 7 6 10 10 H 1.09005 * 109.46888 * 304.99673 * 9 8 7 11 11 O 1.42894 * 109.46991 * 64.99899 * 9 8 7 12 12 C 1.53001 * 109.47251 * 184.99900 * 9 8 7 13 13 O 1.42892 * 109.47195 * 174.99737 * 12 9 8 14 14 C 1.35679 * 117.00240 * 180.02562 * 13 12 9 15 15 C 1.39308 * 119.81180 * 359.72605 * 14 13 12 16 16 C 1.36447 * 120.18280 * 179.76508 * 15 14 13 17 17 C 1.40838 * 119.80660 * 0.51153 * 16 15 14 18 18 C 1.41212 * 120.17776 * 179.72516 * 17 16 15 19 19 H 1.07998 * 120.00443 * 155.16296 * 18 17 16 20 20 C 1.39894 * 119.99656 * 335.16308 * 18 17 16 21 21 N 1.30880 * 120.00303 * 342.16043 * 20 18 17 22 22 Si 1.86805 * 119.99966 * 162.16026 * 20 18 17 23 23 H 1.48499 * 109.47026 * 94.65489 * 22 20 18 24 24 H 1.48499 * 109.47413 * 214.65641 * 22 20 18 25 25 H 1.48504 * 109.47134 * 334.65635 * 22 20 18 26 26 C 1.40832 * 119.64441 * 359.74177 * 17 16 15 27 27 C 1.36434 * 119.81026 * 0.02562 * 26 17 16 28 28 C 1.47453 * 108.56819 * 335.90747 * 7 6 5 29 29 H 1.08995 * 110.99570 * 323.98344 * 5 3 2 30 30 H 1.08996 * 110.98881 * 87.76936 * 5 3 2 31 31 H 1.09003 * 110.37383 * 278.24522 * 6 5 3 32 32 H 1.08999 * 110.37316 * 155.90306 * 6 5 3 33 33 H 1.09002 * 109.47328 * 170.84423 * 8 7 6 34 34 H 1.08999 * 109.47225 * 50.84496 * 8 7 6 35 35 H 0.96698 * 113.99878 * 60.00036 * 11 9 8 36 36 H 1.08997 * 109.47176 * 294.99948 * 12 9 8 37 37 H 1.09006 * 109.47021 * 55.00247 * 12 9 8 38 38 H 1.08001 * 119.91561 * 0.02562 * 15 14 13 39 39 H 1.07992 * 120.09472 * 180.25396 * 16 15 14 40 40 H 0.96998 * 119.99729 * 180.02562 * 21 20 18 41 41 H 1.07995 * 120.09360 * 179.97438 * 26 17 16 42 42 H 1.08006 * 119.90830 * 180.02562 * 27 26 17 43 43 H 1.08997 * 109.88885 * 120.39330 * 28 7 6 44 44 H 1.08997 * 109.88163 * 241.41857 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 9 3.1006 0.4908 -1.2142 5 6 3.1609 -1.4211 0.2824 6 6 4.5476 -1.1015 0.8946 7 7 4.3295 0.1115 1.7111 8 6 5.5186 0.9738 1.7010 9 6 6.6485 0.2937 2.4767 10 1 6.3015 0.0435 3.4793 11 8 7.0414 -0.9002 1.7969 12 6 7.8445 1.2430 2.5730 13 8 8.8544 0.6549 3.3952 14 6 9.9898 1.3730 3.5848 15 6 10.1284 2.6215 2.9824 16 6 11.2650 3.3522 3.1719 17 6 12.3041 2.8361 3.9703 18 6 13.4862 3.5832 4.1670 19 1 14.0900 3.4170 5.0468 20 6 13.8750 4.5386 3.2220 21 7 13.3687 4.5096 2.0154 22 14 15.1171 5.8558 3.6821 23 1 16.4777 5.4141 3.2834 24 1 14.7813 7.1201 2.9793 25 1 15.0798 6.0804 5.1496 26 6 12.1581 1.5709 4.5713 27 6 11.0131 0.8551 4.3756 28 6 3.1531 0.8273 1.1836 29 1 2.5310 -1.9502 0.9975 30 1 3.2632 -1.9908 -0.6411 31 1 5.2737 -0.9027 0.1063 32 1 4.8843 -1.9263 1.5227 33 1 5.2793 1.9283 2.1698 34 1 5.8354 1.1438 0.6720 35 1 7.3619 -0.7528 0.8966 36 1 8.2468 1.4228 1.5760 37 1 7.5239 2.1880 3.0114 38 1 9.3323 3.0140 2.3671 39 1 11.3692 4.3216 2.7076 40 1 13.6386 5.1719 1.3602 41 1 12.9504 1.1680 5.1846 42 1 10.8993 -0.1152 4.8361 43 1 2.3918 0.9114 1.9590 44 1 3.4458 1.8201 0.8421 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000615645944.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:44:33 Heat of formation + Delta-G solvation = -74.123129 kcal Electronic energy + Delta-G solvation = -27462.823614 eV Core-core repulsion = 23295.121266 eV Total energy + Delta-G solvation = -4167.702348 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 334.148 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -48.62560 -39.79321 -38.82216 -37.47806 -36.74116 -35.94720 -33.36282 -32.73617 -30.21846 -29.79757 -29.63601 -28.89735 -25.92404 -24.59266 -23.01621 -22.44219 -21.60433 -20.92591 -20.37280 -19.30477 -17.50519 -17.35348 -16.83665 -16.62595 -16.22029 -15.96288 -15.46919 -15.23473 -15.15239 -14.66102 -14.35411 -14.19642 -13.98625 -13.95124 -13.62899 -13.57762 -13.28588 -13.05656 -12.79483 -12.69429 -12.47407 -12.31403 -12.04352 -11.90406 -11.75678 -11.69971 -11.49739 -11.44292 -11.13929 -11.02422 -10.84316 -10.62226 -10.01404 -9.94878 -9.80334 -9.38900 -9.03143 -8.89800 -7.67919 -7.03227 -6.75336 -4.27270 1.90794 1.93933 2.71843 2.74668 2.94244 3.06538 3.10655 3.19678 3.25697 3.50379 3.57829 3.93090 3.96265 4.14244 4.36201 4.45860 4.59461 4.65616 4.82379 4.90018 4.98520 5.06679 5.13662 5.19608 5.28363 5.34017 5.44319 5.59869 5.65411 5.67528 6.00610 6.07285 6.26397 6.32465 6.43894 6.69438 6.70350 6.87019 7.04648 7.25691 7.38369 7.53501 7.56975 7.87882 7.98126 8.13205 8.42193 8.62821 8.88109 8.96985 10.19588 Molecular weight = 334.15amu Principal moments of inertia in cm(-1) A = 0.025669 B = 0.001886 C = 0.001806 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1090.533894 B =14841.326648 C =15496.686148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.387 5.387 2 C 0.191 3.809 3 C 0.201 3.799 4 F -0.174 7.174 5 C -0.142 4.142 6 C 0.050 3.950 7 N -0.514 5.514 8 C 0.017 3.983 9 C 0.117 3.883 10 H 0.116 0.884 11 O -0.548 6.548 12 C 0.039 3.961 13 O -0.317 6.317 14 C -0.010 4.010 15 C -0.174 4.174 16 C -0.134 4.134 17 C 0.087 3.913 18 C -0.463 4.463 19 H 0.077 0.923 20 C 0.075 3.925 21 N -0.800 5.800 22 Si 0.906 3.094 23 H -0.271 1.271 24 H -0.276 1.276 25 H -0.261 1.261 26 C -0.195 4.195 27 C -0.112 4.112 28 C 0.031 3.969 29 H 0.103 0.897 30 H 0.101 0.899 31 H 0.060 0.940 32 H 0.109 0.891 33 H 0.092 0.908 34 H 0.050 0.950 35 H 0.369 0.631 36 H 0.052 0.948 37 H 0.059 0.941 38 H 0.093 0.907 39 H 0.120 0.880 40 H 0.279 0.721 41 H 0.100 0.900 42 H 0.097 0.903 43 H 0.105 0.895 44 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.207 -6.543 -5.272 19.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.061 5.061 2 C -0.130 4.130 3 C 0.178 3.822 4 F -0.155 7.155 5 C -0.181 4.181 6 C -0.077 4.077 7 N -0.238 5.238 8 C -0.111 4.111 9 C 0.057 3.943 10 H 0.134 0.866 11 O -0.353 6.353 12 C -0.038 4.038 13 O -0.233 6.233 14 C -0.053 4.053 15 C -0.193 4.193 16 C -0.154 4.154 17 C 0.085 3.915 18 C -0.493 4.493 19 H 0.095 0.905 20 C -0.142 4.142 21 N -0.427 5.427 22 Si 0.730 3.270 23 H -0.196 1.196 24 H -0.201 1.201 25 H -0.185 1.185 26 C -0.215 4.215 27 C -0.131 4.131 28 C -0.098 4.098 29 H 0.121 0.879 30 H 0.119 0.881 31 H 0.079 0.921 32 H 0.127 0.873 33 H 0.110 0.890 34 H 0.068 0.932 35 H 0.216 0.784 36 H 0.071 0.929 37 H 0.077 0.923 38 H 0.111 0.889 39 H 0.138 0.862 40 H 0.090 0.910 41 H 0.118 0.882 42 H 0.115 0.885 43 H 0.123 0.877 44 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -19.188 -6.990 -4.372 20.884 hybrid contribution 1.299 1.636 -1.673 2.677 sum -17.889 -5.354 -6.046 19.627 Atomic orbital electron populations 1.81241 1.12273 1.06964 1.05643 1.28929 0.94638 0.94435 0.94975 1.19279 0.81023 0.98610 0.83308 1.93004 1.87594 1.89112 1.45770 1.23484 0.98302 0.92547 1.03799 1.23238 0.94351 0.94018 0.96050 1.63659 1.02994 1.06009 1.51126 1.23027 0.90965 0.96922 1.00201 1.21880 0.90122 0.84841 0.97422 0.86634 1.86659 1.85846 1.31403 1.31360 1.23078 0.89073 0.96422 0.95275 1.85858 1.25218 1.45071 1.67155 1.18583 0.87790 0.93477 1.05468 1.20587 0.99553 0.95464 1.03724 1.20930 0.91931 1.00080 1.02454 1.17603 0.92658 0.90440 0.90846 1.19468 1.06807 1.16849 1.06157 0.90487 1.25874 0.96695 0.97600 0.93993 1.69838 1.38360 1.31640 1.02850 0.86341 0.80472 0.80073 0.80078 1.19635 1.20143 1.18472 1.20607 0.97331 0.95798 1.07782 1.19621 0.93147 0.99383 1.00906 1.23512 0.95158 0.97198 0.93945 0.87861 0.88076 0.92122 0.87307 0.88994 0.93226 0.78395 0.92937 0.92327 0.88929 0.86200 0.91030 0.88197 0.88458 0.87731 0.89593 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -4.04 18.54 42.15 0.78 -3.26 16 2 C 0.19 1.54 14.31 -20.76 -0.30 1.24 16 3 C 0.20 1.26 1.49 -91.58 -0.14 1.12 16 4 F -0.17 -1.35 16.93 2.25 0.04 -1.31 16 5 C -0.14 -0.70 6.30 -24.59 -0.15 -0.86 16 6 C 0.05 0.31 5.07 -2.30 -0.01 0.30 16 7 N -0.51 -3.67 5.16 -231.25 -1.19 -4.87 16 8 C 0.02 0.13 4.39 -3.83 -0.02 0.12 16 9 C 0.12 1.25 3.44 -26.73 -0.09 1.15 16 10 H 0.12 1.37 8.14 -51.93 -0.42 0.94 16 11 O -0.55 -5.97 10.78 -40.08 -0.43 -6.40 16 12 C 0.04 0.54 4.36 37.16 0.16 0.71 16 13 O -0.32 -6.14 10.09 -23.59 -0.24 -6.38 16 14 C -0.01 -0.22 6.71 -38.78 -0.26 -0.48 16 15 C -0.17 -3.95 8.96 -39.83 -0.36 -4.30 16 16 C -0.13 -3.41 8.64 -39.24 -0.34 -3.75 16 17 C 0.09 2.28 5.57 -106.80 -0.60 1.69 16 18 C -0.46 -12.12 9.04 -37.83 -0.34 -12.46 16 19 H 0.08 1.94 7.91 -52.49 -0.41 1.52 16 20 C 0.07 1.86 5.13 -17.34 -0.09 1.77 16 21 N -0.80 -20.40 10.97 55.55 0.61 -19.79 16 22 Si 0.91 18.41 29.60 -169.99 -5.03 13.38 16 23 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 24 H -0.28 -5.49 7.11 56.52 0.40 -5.09 16 25 H -0.26 -5.27 7.11 56.52 0.40 -4.87 16 26 C -0.20 -4.75 9.74 -39.25 -0.38 -5.14 16 27 C -0.11 -2.56 9.92 -39.83 -0.40 -2.96 16 28 C 0.03 0.19 6.25 -2.83 -0.02 0.17 16 29 H 0.10 0.45 8.03 -51.93 -0.42 0.03 16 30 H 0.10 0.39 8.14 -51.93 -0.42 -0.03 16 31 H 0.06 0.36 6.97 -51.93 -0.36 0.00 16 32 H 0.11 0.77 7.60 -51.93 -0.39 0.38 16 33 H 0.09 0.64 8.03 -51.93 -0.42 0.23 16 34 H 0.05 0.35 7.85 -51.93 -0.41 -0.06 16 35 H 0.37 2.97 8.70 45.56 0.40 3.37 16 36 H 0.05 0.72 7.64 -51.93 -0.40 0.32 16 37 H 0.06 0.79 7.66 -51.93 -0.40 0.39 16 38 H 0.09 1.83 6.27 -52.49 -0.33 1.50 16 39 H 0.12 3.13 6.18 -52.49 -0.32 2.80 16 40 H 0.28 6.46 8.30 -40.82 -0.34 6.12 16 41 H 0.10 2.26 8.06 -52.49 -0.42 1.84 16 42 H 0.10 2.02 8.06 -52.48 -0.42 1.60 16 43 H 0.10 0.56 7.81 -51.93 -0.41 0.16 16 44 H 0.09 0.46 7.52 -51.93 -0.39 0.07 16 LS Contribution 371.57 15.07 5.60 5.60 Total: -1.00 -30.26 371.57 -8.28 -38.54 By element: Atomic # 1 Polarization: 11.26 SS G_CDS: -5.09 Total: 6.18 kcal Atomic # 6 Polarization: -18.36 SS G_CDS: -3.32 Total: -21.69 kcal Atomic # 7 Polarization: -28.11 SS G_CDS: 0.20 Total: -27.92 kcal Atomic # 8 Polarization: -12.11 SS G_CDS: -0.67 Total: -12.78 kcal Atomic # 9 Polarization: -1.35 SS G_CDS: 0.04 Total: -1.31 kcal Atomic # 14 Polarization: 18.41 SS G_CDS: -5.03 Total: 13.38 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -30.26 -8.28 -38.54 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000615645944.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.582 kcal (2) G-P(sol) polarization free energy of solvation -30.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds