Wall clock time and date at job start Tue Mar 31 2020 18:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 F 1.39903 * 110.63040 * 238.84934 * 3 2 1 5 5 C 1.55142 * 110.70988 * 2.15147 * 3 2 1 6 6 C 1.54907 * 101.65550 * 82.72567 * 5 3 2 7 7 N 1.47851 * 104.79209 * 37.07061 * 6 5 3 8 8 C 1.46905 * 110.99805 * 213.63414 * 7 6 5 9 9 C 1.53000 * 109.47203 * 290.84658 * 8 7 6 10 10 H 1.09003 * 109.47287 * 60.00251 * 9 8 7 11 11 O 1.42906 * 109.47136 * 300.00296 * 9 8 7 12 12 C 1.52998 * 109.47243 * 180.02562 * 9 8 7 13 13 O 1.42899 * 109.47313 * 185.00273 * 12 9 8 14 14 C 1.35672 * 116.99934 * 179.97438 * 13 12 9 15 15 C 1.39315 * 119.82159 * 359.72055 * 14 13 12 16 16 C 1.36435 * 120.18495 * 179.75749 * 15 14 13 17 17 C 1.40833 * 119.81457 * 0.52039 * 16 15 14 18 18 C 1.41207 * 120.17956 * 179.71850 * 17 16 15 19 19 H 1.08007 * 119.99967 * 204.55654 * 18 17 16 20 20 C 1.39891 * 120.00284 * 24.55357 * 18 17 16 21 21 N 1.30877 * 119.99695 * 17.93940 * 20 18 17 22 22 Si 1.86796 * 120.00150 * 197.93505 * 20 18 17 23 23 H 1.48508 * 109.47328 * 0.02562 * 22 20 18 24 24 H 1.48496 * 109.47092 * 120.00178 * 22 20 18 25 25 H 1.48504 * 109.47448 * 240.00462 * 22 20 18 26 26 C 1.40837 * 119.63981 * 359.73618 * 17 16 15 27 27 C 1.36441 * 119.80906 * 0.02562 * 26 17 16 28 28 C 1.47442 * 108.57027 * 335.90381 * 7 6 5 29 29 H 1.08997 * 110.99174 * 200.81984 * 5 3 2 30 30 H 1.09005 * 110.98680 * 324.63769 * 5 3 2 31 31 H 1.09000 * 110.37554 * 278.24571 * 6 5 3 32 32 H 1.08997 * 110.37589 * 155.90017 * 6 5 3 33 33 H 1.08992 * 109.47239 * 170.84751 * 8 7 6 34 34 H 1.09001 * 109.46774 * 50.84454 * 8 7 6 35 35 H 0.96700 * 113.99390 * 299.99702 * 11 9 8 36 36 H 1.09003 * 109.46727 * 304.99586 * 12 9 8 37 37 H 1.08998 * 109.47125 * 64.99864 * 12 9 8 38 38 H 1.07996 * 119.89847 * 0.02562 * 15 14 13 39 39 H 1.08000 * 120.08916 * 180.25243 * 16 15 14 40 40 H 0.97001 * 119.99925 * 179.97438 * 21 20 18 41 41 H 1.07993 * 120.09585 * 179.97438 * 26 17 16 42 42 H 1.08001 * 119.90174 * 180.02562 * 27 26 17 43 43 H 1.09000 * 109.88534 * 120.39540 * 28 7 6 44 44 H 1.08998 * 109.88796 * 241.58304 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 9 3.1006 0.6782 1.1205 5 6 3.1573 -1.4492 -0.0545 6 6 3.0884 -1.7532 -1.5719 7 7 3.4482 -0.4785 -2.2289 8 6 2.7184 -0.3135 -3.4931 9 6 3.2326 -1.3294 -4.5152 10 1 3.0763 -2.3387 -4.1345 11 8 4.6277 -1.1154 -4.7390 12 6 2.4729 -1.1571 -5.8320 13 8 2.8698 -2.1794 -6.7482 14 6 2.2852 -2.1703 -7.9724 15 6 1.3402 -1.1944 -8.2816 16 6 0.7512 -1.1753 -9.5121 17 6 1.0929 -2.1522 -10.4672 18 6 0.4838 -2.1432 -11.7411 19 1 0.4197 -3.0556 -12.3155 20 6 -0.0368 -0.9526 -12.2591 21 7 0.3338 0.1973 -11.7557 22 14 -1.2606 -1.0038 -13.6694 23 1 -1.5135 -2.4157 -14.0544 24 1 -2.5348 -0.3720 -13.2423 25 1 -0.7071 -0.2648 -14.8325 26 6 2.0453 -3.1384 -10.1448 27 6 2.6285 -3.1405 -8.9113 28 6 3.1533 0.6281 -1.3002 29 1 4.1851 -1.4912 0.3059 30 1 2.5193 -2.1299 0.5094 31 1 2.0791 -2.0534 -1.8533 32 1 3.8043 -2.5315 -1.8359 33 1 2.8746 0.6957 -3.8738 34 1 1.6543 -0.4768 -3.3223 35 1 4.8410 -0.2356 -5.0790 36 1 1.4015 -1.2322 -5.6458 37 1 2.7003 -0.1797 -6.2575 38 1 1.0763 -0.4485 -7.5465 39 1 0.0218 -0.4157 -9.7515 40 1 -0.0269 1.0229 -12.1152 41 1 2.3125 -3.8913 -10.8714 42 1 3.3593 -3.8958 -8.6626 43 1 4.0646 1.1872 -1.0884 44 1 2.4035 1.2882 -1.7363 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000615645946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:44:43 Heat of formation + Delta-G solvation = -72.949961 kcal Electronic energy + Delta-G solvation = -27476.605721 eV Core-core repulsion = 23308.954245 eV Total energy + Delta-G solvation = -4167.651476 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 334.148 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -48.59410 -39.96018 -38.89778 -37.43249 -36.69066 -35.93736 -33.36538 -32.67436 -30.24886 -29.72660 -29.59827 -28.84803 -25.93506 -24.61223 -23.39598 -22.66110 -21.44120 -20.89083 -20.38890 -19.15708 -17.43393 -17.35744 -17.02920 -16.48518 -16.27514 -15.99244 -15.35581 -15.24518 -15.13929 -14.70167 -14.56315 -14.26498 -14.02761 -13.93993 -13.64868 -13.49918 -13.37424 -13.05125 -12.87206 -12.67891 -12.43106 -12.37361 -12.05571 -11.95308 -11.78400 -11.73877 -11.48571 -11.43070 -11.15796 -11.01851 -10.83853 -10.61913 -10.00713 -9.96932 -9.79335 -9.39776 -9.04043 -8.90646 -7.68684 -7.04440 -6.75885 -4.27859 1.89228 1.90102 2.69427 2.73172 2.93587 3.06662 3.11851 3.16995 3.18289 3.51397 3.57598 3.88234 3.92834 4.00041 4.39087 4.58726 4.59875 4.65461 4.72831 4.78061 4.94020 5.06215 5.09395 5.18151 5.23248 5.31994 5.33769 5.45722 5.58988 5.64441 5.92639 6.06511 6.25245 6.27794 6.35139 6.68127 6.68740 6.86385 7.04049 7.25172 7.37872 7.53031 7.71321 7.87363 7.97669 8.12492 8.41361 8.62242 8.87551 8.96318 10.18913 Molecular weight = 334.15amu Principal moments of inertia in cm(-1) A = 0.021486 B = 0.001983 C = 0.001890 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1302.872164 B =14118.211291 C =14814.887124 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.380 5.380 2 C 0.180 3.820 3 C 0.204 3.796 4 F -0.170 7.170 5 C -0.137 4.137 6 C 0.036 3.964 7 N -0.504 5.504 8 C 0.015 3.985 9 C 0.120 3.880 10 H 0.104 0.896 11 O -0.538 6.538 12 C 0.037 3.963 13 O -0.317 6.317 14 C -0.011 4.011 15 C -0.174 4.174 16 C -0.135 4.135 17 C 0.087 3.913 18 C -0.462 4.462 19 H 0.078 0.922 20 C 0.074 3.926 21 N -0.800 5.800 22 Si 0.906 3.094 23 H -0.261 1.261 24 H -0.273 1.273 25 H -0.275 1.275 26 C -0.196 4.196 27 C -0.112 4.112 28 C 0.032 3.968 29 H 0.114 0.886 30 H 0.095 0.905 31 H 0.056 0.944 32 H 0.105 0.895 33 H 0.088 0.912 34 H 0.050 0.950 35 H 0.372 0.628 36 H 0.055 0.945 37 H 0.055 0.945 38 H 0.092 0.908 39 H 0.121 0.879 40 H 0.279 0.721 41 H 0.100 0.900 42 H 0.098 0.902 43 H 0.117 0.883 44 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.618 2.074 20.728 21.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.054 5.054 2 C -0.141 4.141 3 C 0.181 3.819 4 F -0.150 7.150 5 C -0.176 4.176 6 C -0.091 4.091 7 N -0.228 5.228 8 C -0.113 4.113 9 C 0.060 3.940 10 H 0.122 0.878 11 O -0.342 6.342 12 C -0.040 4.040 13 O -0.233 6.233 14 C -0.054 4.054 15 C -0.193 4.193 16 C -0.154 4.154 17 C 0.085 3.915 18 C -0.492 4.492 19 H 0.096 0.904 20 C -0.142 4.142 21 N -0.426 5.426 22 Si 0.731 3.269 23 H -0.184 1.184 24 H -0.198 1.198 25 H -0.200 1.200 26 C -0.215 4.215 27 C -0.130 4.130 28 C -0.098 4.098 29 H 0.133 0.867 30 H 0.113 0.887 31 H 0.074 0.926 32 H 0.123 0.877 33 H 0.106 0.894 34 H 0.068 0.932 35 H 0.219 0.781 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.110 0.890 39 H 0.138 0.862 40 H 0.089 0.911 41 H 0.118 0.882 42 H 0.116 0.884 43 H 0.135 0.865 44 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 4.578 1.603 20.869 21.426 hybrid contribution -1.418 1.138 -0.567 1.904 sum 3.160 2.741 20.303 20.729 Atomic orbital electron populations 1.81269 1.12218 1.06349 1.05558 1.29130 0.94911 0.94823 0.95207 1.19216 0.80821 0.95724 0.86179 1.92994 1.87419 1.81467 1.53139 1.23394 1.04266 0.91598 0.98333 1.23223 1.01317 0.93443 0.91147 1.63632 1.55338 1.01025 1.02824 1.23077 0.96193 1.01304 0.90757 1.21771 0.82014 0.99185 0.91067 0.87817 1.86628 1.21978 1.37991 1.87561 1.23107 0.98590 0.92210 0.90110 1.85855 1.64729 1.50063 1.22642 1.18583 1.01154 1.00399 0.85253 1.20586 1.00940 0.99268 0.98540 1.20937 1.01578 1.01521 0.91406 1.17607 0.89966 0.90922 0.93048 1.19505 1.32997 0.95313 1.01387 0.90423 1.25882 0.95488 0.94926 0.97938 1.69846 1.35548 0.98525 1.38699 0.86292 0.80444 0.79598 0.80560 1.18419 1.19818 1.20045 1.20609 1.01409 1.03588 0.95935 1.19622 1.02028 0.98170 0.93213 1.23542 1.02411 0.94929 0.88881 0.86750 0.88674 0.92596 0.87671 0.89401 0.93192 0.78130 0.92642 0.92690 0.88991 0.86153 0.91057 0.88166 0.88434 0.86546 0.90596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -4.31 18.54 42.15 0.78 -3.53 16 2 C 0.18 1.56 14.08 -20.76 -0.29 1.27 16 3 C 0.20 1.27 1.60 -91.58 -0.15 1.12 16 4 F -0.17 -1.19 16.93 2.25 0.04 -1.15 16 5 C -0.14 -0.65 6.36 -24.59 -0.16 -0.81 16 6 C 0.04 0.23 5.58 -2.29 -0.01 0.22 16 7 N -0.50 -3.67 5.03 -231.25 -1.16 -4.83 16 8 C 0.02 0.13 4.23 -3.82 -0.02 0.11 16 9 C 0.12 1.35 3.24 -26.73 -0.09 1.27 16 10 H 0.10 1.22 7.49 -51.93 -0.39 0.83 16 11 O -0.54 -6.64 13.17 -40.10 -0.53 -7.17 16 12 C 0.04 0.55 4.36 37.16 0.16 0.71 16 13 O -0.32 -6.29 10.09 -23.59 -0.24 -6.53 16 14 C -0.01 -0.24 6.71 -38.78 -0.26 -0.50 16 15 C -0.17 -4.02 8.96 -39.83 -0.36 -4.38 16 16 C -0.13 -3.47 8.64 -39.25 -0.34 -3.81 16 17 C 0.09 2.31 5.57 -106.81 -0.60 1.71 16 18 C -0.46 -12.19 9.04 -37.84 -0.34 -12.54 16 19 H 0.08 1.97 7.91 -52.48 -0.41 1.56 16 20 C 0.07 1.86 5.13 -17.34 -0.09 1.77 16 21 N -0.80 -20.55 10.96 55.54 0.61 -19.94 16 22 Si 0.91 18.58 29.60 -169.99 -5.03 13.55 16 23 H -0.26 -5.29 7.11 56.52 0.40 -4.89 16 24 H -0.27 -5.51 7.11 56.52 0.40 -5.10 16 25 H -0.28 -5.55 7.11 56.52 0.40 -5.15 16 26 C -0.20 -4.81 9.74 -39.25 -0.38 -5.19 16 27 C -0.11 -2.59 9.92 -39.83 -0.40 -2.98 16 28 C 0.03 0.19 6.24 -2.83 -0.02 0.17 16 29 H 0.11 0.42 8.14 -51.93 -0.42 0.00 16 30 H 0.09 0.37 8.02 -51.93 -0.42 -0.04 16 31 H 0.06 0.38 7.62 -51.93 -0.40 -0.02 16 32 H 0.11 0.68 8.14 -51.93 -0.42 0.25 16 33 H 0.09 0.64 8.03 -51.93 -0.42 0.22 16 34 H 0.05 0.42 7.85 -51.93 -0.41 0.01 16 35 H 0.37 3.50 9.04 45.56 0.41 3.91 16 36 H 0.06 0.79 7.63 -51.93 -0.40 0.39 16 37 H 0.05 0.78 7.66 -51.93 -0.40 0.38 16 38 H 0.09 1.86 6.27 -52.49 -0.33 1.54 16 39 H 0.12 3.18 6.16 -52.49 -0.32 2.86 16 40 H 0.28 6.49 8.30 -40.82 -0.34 6.16 16 41 H 0.10 2.28 8.06 -52.49 -0.42 1.86 16 42 H 0.10 2.05 8.06 -52.49 -0.42 1.63 16 43 H 0.12 0.56 8.10 -51.93 -0.42 0.14 16 44 H 0.08 0.43 7.23 -51.93 -0.38 0.06 16 LS Contribution 374.77 15.07 5.65 5.65 Total: -1.00 -30.93 374.77 -8.31 -39.24 By element: Atomic # 1 Polarization: 11.68 SS G_CDS: -5.10 Total: 6.59 kcal Atomic # 6 Polarization: -18.54 SS G_CDS: -3.33 Total: -21.87 kcal Atomic # 7 Polarization: -28.53 SS G_CDS: 0.23 Total: -28.30 kcal Atomic # 8 Polarization: -12.93 SS G_CDS: -0.77 Total: -13.70 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.04 Total: -1.15 kcal Atomic # 14 Polarization: 18.58 SS G_CDS: -5.03 Total: 13.55 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -30.93 -8.31 -39.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000615645946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.712 kcal (2) G-P(sol) polarization free energy of solvation -30.930 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.642 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.950 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds