Wall clock time and date at job start Tue Mar 31 2020 17:51:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.34781 * 120.00208 * 2 1 4 4 O 1.21281 * 120.00443 * 180.02562 * 3 2 1 5 5 C 1.50706 * 119.99890 * 0.02562 * 3 2 1 6 6 H 1.09006 * 110.66406 * 55.69565 * 5 3 2 7 7 C 1.54708 * 110.74653 * 292.48426 * 5 3 2 8 8 C 1.51649 * 101.93081 * 266.96691 * 7 5 3 9 9 C 1.37755 * 132.14755 * 164.58617 * 8 7 5 10 10 C 1.38531 * 119.96030 * 180.39097 * 9 8 7 11 11 F 1.35096 * 120.14318 * 179.97438 * 10 9 8 12 12 C 1.38478 * 119.71481 * 359.96902 * 10 9 8 13 13 C 1.37939 * 120.32409 * 359.86166 * 12 10 9 14 14 C 1.38863 * 107.04556 * 344.61543 * 8 7 5 15 15 O 1.36637 * 111.28958 * 358.89996 * 14 8 7 16 16 C 1.46503 * 120.00183 * 180.02562 * 2 1 3 17 17 H 1.09001 * 110.88710 * 183.87330 * 16 2 1 18 18 C 1.55160 * 111.00158 * 59.99613 * 16 2 1 19 19 C 1.54325 * 102.94141 * 206.42382 * 18 16 2 20 20 N 1.47022 * 107.26808 * 22.19396 * 19 18 16 21 21 C 1.36943 * 125.64725 * 181.02022 * 20 19 18 22 22 H 1.08002 * 119.99788 * 180.02562 * 21 20 19 23 23 C 1.38811 * 119.99622 * 0.30349 * 21 20 19 24 24 N 1.31614 * 120.00467 * 359.72375 * 23 21 20 25 25 Si 1.86801 * 119.99700 * 179.72266 * 23 21 20 26 26 H 1.48504 * 109.47306 * 359.97438 * 25 23 21 27 27 H 1.48499 * 109.47021 * 119.99661 * 25 23 21 28 28 H 1.48501 * 109.47039 * 240.00078 * 25 23 21 29 29 C 1.47427 * 108.70607 * 1.28411 * 20 19 18 30 30 H 1.09004 * 109.46860 * 269.99832 * 1 2 3 31 31 H 1.09001 * 109.47395 * 29.99316 * 1 2 3 32 32 H 1.08997 * 109.47288 * 149.99708 * 1 2 3 33 33 H 1.08996 * 110.93617 * 25.12927 * 7 5 3 34 34 H 1.09005 * 110.93363 * 148.81023 * 7 5 3 35 35 H 1.08001 * 120.02093 * 0.36258 * 9 8 7 36 36 H 1.08003 * 119.83868 * 179.84420 * 12 10 9 37 37 H 1.07998 * 119.86614 * 179.97438 * 13 12 10 38 38 H 1.08996 * 110.71761 * 88.06342 * 18 16 2 39 39 H 1.08996 * 110.72053 * 324.78688 * 18 16 2 40 40 H 1.09000 * 109.87990 * 262.77884 * 19 18 16 41 41 H 1.08991 * 109.88062 * 141.60908 * 19 18 16 42 42 H 0.96995 * 120.00147 * 180.02562 * 24 23 21 43 43 H 1.09001 * 110.36238 * 94.47989 * 29 20 19 44 44 H 1.08998 * 110.36877 * 216.80572 * 29 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1673 -0.0005 5 6 1.3854 2.4724 0.0006 6 1 0.6955 2.5179 0.8434 7 6 0.6317 2.6707 -1.3359 8 6 1.6369 3.4643 -2.1479 9 6 1.7278 3.7370 -3.4951 10 6 2.7792 4.4994 -3.9772 11 9 2.8723 4.7686 -5.2978 12 6 3.7343 4.9844 -3.0997 13 6 3.6413 4.7143 -1.7502 14 6 2.5853 3.9513 -1.2581 15 8 2.2948 3.5855 0.0259 16 6 2.1975 -1.2687 -0.0006 17 1 3.2717 -1.0973 0.0683 18 6 1.8482 -2.1119 -1.2554 19 6 2.1063 -3.5582 -0.7827 20 7 2.0265 -3.5583 0.6854 21 6 2.2162 -4.6465 1.4948 22 1 2.1351 -4.5427 2.5668 23 6 2.5183 -5.8815 0.9378 24 7 2.6170 -6.0080 -0.3685 25 14 2.7847 -7.3642 2.0424 26 1 2.6193 -6.9602 3.4619 27 1 1.7910 -8.4158 1.7077 28 1 4.1560 -7.8952 1.8360 29 6 1.7021 -2.1944 1.1414 30 1 -0.3633 0.0000 1.0277 31 1 -0.3634 0.8900 -0.5137 32 1 -0.3634 -0.8899 -0.5139 33 1 0.4187 1.7120 -1.8089 34 1 -0.2848 3.2412 -1.1852 35 1 0.9802 3.3562 -4.1752 36 1 4.5562 5.5769 -3.4737 37 1 4.3905 5.0960 -1.0724 38 1 2.5041 -1.8553 -2.0872 39 1 0.8025 -1.9773 -1.5316 40 1 3.0980 -3.8805 -1.1001 41 1 1.3482 -4.2238 -1.1952 42 1 2.8278 -6.8711 -0.7577 43 1 0.6264 -2.0867 1.2804 44 1 2.2298 -1.9687 2.0680 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001033475596.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:51:23 Heat of formation + Delta-G solvation = -37.052424 kcal Electronic energy + Delta-G solvation = -28852.260207 eV Core-core repulsion = 24686.165365 eV Total energy + Delta-G solvation = -4166.094842 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 334.148 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.08518 -41.82546 -39.58789 -37.68854 -36.99806 -35.09705 -33.21964 -32.13159 -30.21296 -29.89592 -29.13729 -27.55586 -26.88400 -25.07195 -24.09859 -22.81943 -22.23556 -20.90833 -20.17786 -19.14060 -18.02368 -17.69879 -17.39458 -17.09999 -16.97024 -16.21842 -15.79876 -15.51330 -14.93921 -14.76910 -14.58850 -14.45735 -14.09439 -13.78076 -13.46877 -13.36036 -13.24583 -13.15134 -12.80781 -12.72498 -12.57446 -12.40928 -12.10522 -11.87209 -11.78091 -11.61482 -11.14454 -10.97984 -10.90700 -10.83155 -10.34686 -10.09968 -9.90364 -9.78253 -9.68628 -9.37343 -8.67940 -8.48214 -8.33066 -6.89352 -5.75488 -3.10027 0.77704 0.86826 2.40956 2.65387 3.08227 3.24463 3.38039 3.43747 3.46085 3.73031 3.97890 4.18348 4.23722 4.44649 4.47398 4.70783 4.76654 4.83871 4.97254 5.10300 5.16789 5.22418 5.27651 5.37509 5.43545 5.48740 5.56427 5.60770 5.65525 5.73506 5.78993 5.81981 5.95058 6.11480 6.18454 6.22858 6.42808 6.49683 6.60834 6.73322 6.85901 7.39569 7.50634 7.55319 7.77655 8.10392 8.20509 9.16822 9.76761 10.41114 11.36096 Molecular weight = 334.15amu Principal moments of inertia in cm(-1) A = 0.022599 B = 0.002517 C = 0.002427 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1238.677712 B =11122.218304 C =11532.740733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.595 5.595 3 C 0.495 3.505 4 O -0.520 6.520 5 C 0.065 3.935 6 H 0.144 0.856 7 C -0.102 4.102 8 C -0.146 4.146 9 C -0.101 4.101 10 C 0.068 3.932 11 F -0.138 7.138 12 C -0.117 4.117 13 C -0.103 4.103 14 C 0.106 3.894 15 O -0.270 6.270 16 C 0.123 3.877 17 H 0.107 0.893 18 C -0.153 4.153 19 C 0.180 3.820 20 N -0.603 5.603 21 C -0.229 4.229 22 H 0.079 0.921 23 C -0.007 4.007 24 N -0.921 5.921 25 Si 0.913 3.087 26 H -0.280 1.280 27 H -0.290 1.290 28 H -0.290 1.290 29 C 0.132 3.868 30 H 0.062 0.938 31 H 0.071 0.929 32 H 0.084 0.916 33 H 0.106 0.894 34 H 0.109 0.891 35 H 0.139 0.861 36 H 0.145 0.855 37 H 0.141 0.859 38 H 0.062 0.938 39 H 0.061 0.939 40 H 0.049 0.951 41 H 0.046 0.954 42 H 0.252 0.748 43 H 0.023 0.977 44 H 0.041 0.959 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.582 22.668 -4.898 24.107 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.329 5.329 3 C 0.281 3.719 4 O -0.395 6.395 5 C 0.005 3.995 6 H 0.161 0.839 7 C -0.139 4.139 8 C -0.147 4.147 9 C -0.120 4.120 10 C 0.049 3.951 11 F -0.117 7.117 12 C -0.135 4.135 13 C -0.122 4.122 14 C 0.060 3.940 15 O -0.182 6.182 16 C 0.019 3.981 17 H 0.125 0.875 18 C -0.192 4.192 19 C 0.055 3.945 20 N -0.330 5.330 21 C -0.357 4.357 22 H 0.097 0.903 23 C -0.204 4.204 24 N -0.568 5.568 25 Si 0.744 3.256 26 H -0.205 1.205 27 H -0.217 1.217 28 H -0.217 1.217 29 C 0.005 3.995 30 H 0.081 0.919 31 H 0.090 0.910 32 H 0.102 0.898 33 H 0.125 0.875 34 H 0.127 0.873 35 H 0.157 0.843 36 H 0.162 0.838 37 H 0.159 0.841 38 H 0.081 0.919 39 H 0.079 0.921 40 H 0.068 0.932 41 H 0.064 0.936 42 H 0.063 0.937 43 H 0.041 0.959 44 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges -5.788 22.533 -4.742 23.742 hybrid contribution -0.028 -0.995 0.226 1.021 sum -5.816 21.537 -4.516 22.761 Atomic orbital electron populations 1.22062 0.79796 1.03709 1.02583 1.47786 1.06970 1.05796 1.72313 1.20718 0.88481 0.85262 0.77486 1.90745 1.13452 1.86779 1.48552 1.23362 0.89942 0.85211 1.00948 0.83882 1.21937 0.97877 1.01710 0.92418 1.20457 0.97397 1.03158 0.93711 1.20161 0.98426 0.99054 0.94332 1.17355 0.97828 1.01856 0.78061 1.91500 1.96129 1.92447 1.31617 1.20860 0.99254 1.01276 0.92138 1.20099 0.96496 1.00948 0.94631 1.19658 0.94086 0.96289 0.83927 1.87091 1.63345 1.44947 1.22864 1.22567 0.97447 0.80668 0.97390 0.87525 1.23250 1.00462 0.98762 0.96703 1.21147 1.01094 0.88824 0.83482 1.44396 1.83064 1.03247 1.02283 1.19097 1.41253 0.85966 0.89417 0.90301 1.24817 1.01761 0.97742 0.96039 1.69960 1.54792 1.23431 1.08664 0.86024 0.77487 0.82696 0.79419 1.20475 1.21717 1.21689 1.21774 0.97062 0.85938 0.94728 0.91925 0.91008 0.89775 0.87541 0.87270 0.84302 0.83767 0.84144 0.91917 0.92073 0.93238 0.93627 0.93718 0.95925 0.94036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.58 8.47 59.84 0.51 1.09 16 2 N -0.59 -8.28 2.90 -171.35 -0.50 -8.77 16 3 C 0.49 7.26 6.96 -10.98 -0.08 7.19 16 4 O -0.52 -10.07 15.87 -13.51 -0.21 -10.28 16 5 C 0.07 0.68 3.20 -26.98 -0.09 0.60 16 6 H 0.14 1.02 8.03 -51.93 -0.42 0.60 16 7 C -0.10 -0.82 5.33 -26.52 -0.14 -0.96 16 8 C -0.15 -1.53 6.26 -104.10 -0.65 -2.19 16 9 C -0.10 -1.00 10.02 -39.65 -0.40 -1.39 16 10 C 0.07 0.71 7.31 -39.38 -0.29 0.42 16 11 F -0.14 -1.49 17.27 2.25 0.04 -1.45 16 12 C -0.12 -1.11 10.00 -39.60 -0.40 -1.50 16 13 C -0.10 -1.09 10.06 -39.31 -0.40 -1.48 16 14 C 0.11 1.27 6.87 -38.97 -0.27 1.01 16 15 O -0.27 -3.46 10.46 -40.87 -0.43 -3.89 16 16 C 0.12 2.21 3.47 -65.66 -0.23 1.98 16 17 H 0.11 2.21 7.02 -51.93 -0.36 1.84 16 18 C -0.15 -2.79 6.51 -24.89 -0.16 -2.95 16 19 C 0.18 4.28 5.37 -3.06 -0.02 4.26 16 20 N -0.60 -15.19 3.39 -169.94 -0.58 -15.76 16 21 C -0.23 -6.33 10.28 -15.06 -0.15 -6.49 16 22 H 0.08 2.11 7.83 -52.49 -0.41 1.70 16 23 C -0.01 -0.20 5.49 -17.43 -0.10 -0.30 16 24 N -0.92 -26.81 10.31 55.49 0.57 -26.24 16 25 Si 0.91 21.97 29.55 -169.99 -5.02 16.95 16 26 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 27 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 28 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 29 C 0.13 2.68 6.79 -2.41 -0.02 2.66 16 30 H 0.06 0.53 8.09 -51.93 -0.42 0.11 16 31 H 0.07 0.45 4.47 -51.93 -0.23 0.21 16 32 H 0.08 0.86 6.41 -51.93 -0.33 0.53 16 33 H 0.11 0.81 6.30 -51.93 -0.33 0.48 16 34 H 0.11 0.55 8.14 -51.93 -0.42 0.12 16 35 H 0.14 1.08 8.06 -52.49 -0.42 0.66 16 36 H 0.14 1.01 8.06 -52.48 -0.42 0.59 16 37 H 0.14 1.24 8.06 -52.49 -0.42 0.82 16 38 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 39 H 0.06 0.98 6.40 -51.93 -0.33 0.65 16 40 H 0.05 1.33 7.37 -51.93 -0.38 0.94 16 41 H 0.05 1.19 7.51 -51.93 -0.39 0.80 16 42 H 0.25 7.13 8.31 -40.82 -0.34 6.79 16 43 H 0.02 0.43 7.00 -51.93 -0.36 0.07 16 44 H 0.04 0.86 8.14 -51.93 -0.42 0.44 16 LS Contribution 356.82 15.07 5.38 5.38 Total: -1.00 -34.19 356.82 -9.26 -43.45 By element: Atomic # 1 Polarization: 4.32 SS G_CDS: -5.65 Total: -1.32 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: -2.87 Total: 1.95 kcal Atomic # 7 Polarization: -50.27 SS G_CDS: -0.50 Total: -50.78 kcal Atomic # 8 Polarization: -13.53 SS G_CDS: -0.64 Total: -14.17 kcal Atomic # 9 Polarization: -1.49 SS G_CDS: 0.04 Total: -1.45 kcal Atomic # 14 Polarization: 21.97 SS G_CDS: -5.02 Total: 16.95 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -34.19 -9.26 -43.45 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001033475596.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.396 kcal (2) G-P(sol) polarization free energy of solvation -34.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds