Wall clock time and date at job start Tue Mar 31 2020 18:20:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31005 * 1 3 3 C 1.50694 * 120.00142 * 2 1 4 4 N 1.46495 * 109.47290 * 125.00413 * 3 2 1 5 5 C 1.46499 * 120.00365 * 93.71572 * 4 3 2 6 6 C 1.50696 * 109.47217 * 95.15660 * 5 4 3 7 7 H 1.07993 * 120.00150 * 359.97438 * 6 5 4 8 8 C 1.37886 * 119.99969 * 180.02562 * 6 5 4 9 9 N 1.31515 * 119.99944 * 179.97438 * 8 6 5 10 10 Si 1.86801 * 119.99786 * 359.97438 * 8 6 5 11 11 H 1.48496 * 109.47128 * 269.99909 * 10 8 6 12 12 H 1.48498 * 109.47089 * 29.99887 * 10 8 6 13 13 H 1.48499 * 109.47118 * 149.99995 * 10 8 6 14 14 C 1.34781 * 119.99719 * 273.71338 * 4 3 2 15 15 O 1.21276 * 120.00137 * 4.94239 * 14 4 3 16 16 C 1.50700 * 120.00021 * 184.93393 * 14 4 3 17 17 H 1.09005 * 109.50169 * 41.61409 * 16 14 4 18 18 C 1.53115 * 109.50752 * 281.53680 * 16 14 4 19 19 C 1.53121 * 109.16305 * 182.40404 * 18 16 14 20 20 C 1.53034 * 109.27554 * 57.65348 * 19 18 16 21 21 N 1.46850 * 109.52418 * 300.81903 * 20 19 18 22 22 C 1.46897 * 110.99972 * 185.84099 * 21 20 19 23 23 C 1.52999 * 109.47314 * 77.31499 * 22 21 20 24 24 F 1.39899 * 109.47229 * 54.67023 * 23 22 21 25 25 F 1.39897 * 109.47806 * 174.67460 * 23 22 21 26 26 F 1.39900 * 109.46979 * 294.67354 * 23 22 21 27 27 C 1.46847 * 111.19736 * 61.74793 * 21 20 19 28 28 H 1.07994 * 120.00015 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.99533 * 0.02562 * 1 2 3 30 30 H 1.08003 * 119.99533 * 179.97438 * 2 1 3 31 31 H 1.08996 * 109.47662 * 4.99785 * 3 2 1 32 32 H 1.09002 * 109.47184 * 244.99936 * 3 2 1 33 33 H 1.09001 * 109.46908 * 335.15314 * 5 4 3 34 34 H 1.09003 * 109.47185 * 215.15945 * 5 4 3 35 35 H 0.96997 * 119.99835 * 179.97438 * 9 8 6 36 36 H 1.09004 * 109.52320 * 302.30819 * 18 16 14 37 37 H 1.09000 * 109.52132 * 62.49393 * 18 16 14 38 38 H 1.09000 * 109.50429 * 177.59133 * 19 18 16 39 39 H 1.09001 * 109.50312 * 297.71145 * 19 18 16 40 40 H 1.09002 * 109.46813 * 60.83983 * 20 19 18 41 41 H 1.09008 * 109.46495 * 180.80575 * 20 19 18 42 42 H 1.09002 * 109.47325 * 197.31312 * 22 21 20 43 43 H 1.08995 * 109.47435 * 317.31258 * 22 21 20 44 44 H 1.09000 * 109.46270 * 178.24266 * 27 21 20 45 45 H 1.09000 * 109.46550 * 58.26873 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0636 1.3050 0.0000 4 7 2.9939 1.3318 1.1313 5 6 4.3823 0.9017 0.9484 6 6 5.2489 2.1040 0.6758 7 1 4.8094 3.0898 0.6417 8 6 6.6029 1.9452 0.4687 9 7 7.3591 2.9945 0.2303 10 14 7.3629 0.2398 0.5269 11 1 7.7917 -0.0639 1.9158 12 1 6.3607 -0.7640 0.0876 13 1 8.5406 0.1917 -0.3764 14 6 2.5724 1.7522 2.3405 15 8 1.4032 2.0230 2.5148 16 6 3.5540 1.8857 3.4761 17 1 4.4800 2.3267 3.1068 18 6 3.8458 0.5028 4.0650 19 6 4.7966 0.6538 5.2557 20 6 4.1648 1.5864 6.2916 21 7 3.9058 2.8960 5.6798 22 6 3.4277 3.8592 6.6805 23 6 4.6095 4.3563 7.5154 24 9 5.5972 4.8683 6.6671 25 9 4.1755 5.3617 8.3860 26 9 5.1366 3.2933 8.2566 27 6 2.9582 2.7826 4.5637 28 1 -0.5400 -0.9353 -0.0004 29 1 -0.5399 0.9354 -0.0004 30 1 1.8500 -0.9354 0.0004 31 1 1.3587 2.1316 0.0895 32 1 2.6214 1.4025 -0.9314 33 1 4.4412 0.2127 0.1058 34 1 4.7296 0.4008 1.8521 35 1 8.3116 2.8828 0.0851 36 1 2.9144 0.0449 4.3985 37 1 4.3102 -0.1260 3.3054 38 1 4.9743 -0.3229 5.7057 39 1 5.7422 1.0757 4.9150 40 1 3.2261 1.1572 6.6420 41 1 4.8455 1.7075 7.1343 42 1 2.9582 4.7040 6.1764 43 1 2.7004 3.3752 7.3323 44 1 2.7627 3.7724 4.1514 45 1 2.0252 2.3478 4.9221 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292254176.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:20:19 Heat of formation + Delta-G solvation = -164.167028 kcal Electronic energy + Delta-G solvation = -30697.204343 eV Core-core repulsion = 26107.200963 eV Total energy + Delta-G solvation = -4590.003380 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 334.161 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.04595 -47.64662 -47.41994 -39.98407 -38.20435 -35.55362 -34.22151 -33.26672 -32.19226 -30.81362 -28.98812 -28.08791 -26.01592 -24.26161 -23.32682 -22.62802 -22.25014 -20.10567 -19.56428 -18.48466 -18.43914 -18.39733 -17.28721 -17.02246 -16.54263 -15.94037 -15.35431 -15.00386 -14.75307 -14.51993 -14.36032 -14.25872 -14.11958 -14.06701 -13.89464 -13.67207 -13.60328 -13.58788 -13.26424 -13.05568 -12.74768 -12.50507 -12.38751 -12.12690 -11.96355 -11.73935 -11.45383 -11.22255 -11.07304 -10.85123 -10.69837 -10.65249 -10.37727 -10.28411 -10.16738 -9.62709 -9.35838 -8.90021 -8.71622 -8.50525 -7.82006 -6.22285 -4.23993 2.47767 2.70484 3.16321 3.23035 3.24886 3.25946 3.46033 3.83986 3.96399 4.03980 4.25254 4.46097 4.82810 4.87589 5.04884 5.09298 5.11064 5.18921 5.25398 5.31105 5.39922 5.47690 5.51763 5.72090 5.77237 5.82366 5.92464 5.99420 6.04070 6.07427 6.21006 6.30876 6.36228 6.42705 6.61551 6.72977 6.83163 6.86338 6.94431 7.01013 7.29833 7.42209 8.09300 8.37320 8.80651 8.89159 9.36578 10.90163 Molecular weight = 334.16amu Principal moments of inertia in cm(-1) A = 0.010460 B = 0.004333 C = 0.003491 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2676.291047 B = 6460.519757 C = 8018.023602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.161 4.161 3 C 0.145 3.855 4 N -0.586 5.586 5 C 0.202 3.798 6 C -0.542 4.542 7 H 0.079 0.921 8 C 0.079 3.921 9 N -0.887 5.887 10 Si 0.867 3.133 11 H -0.271 1.271 12 H -0.265 1.265 13 H -0.284 1.284 14 C 0.529 3.471 15 O -0.570 6.570 16 C -0.106 4.106 17 H 0.130 0.870 18 C -0.112 4.112 19 C -0.114 4.114 20 C 0.039 3.961 21 N -0.531 5.531 22 C 0.011 3.989 23 C 0.457 3.543 24 F -0.168 7.168 25 F -0.189 7.189 26 F -0.185 7.185 27 C 0.084 3.916 28 H 0.091 0.909 29 H 0.096 0.904 30 H 0.104 0.896 31 H 0.076 0.924 32 H 0.088 0.912 33 H 0.033 0.967 34 H 0.036 0.964 35 H 0.267 0.733 36 H 0.058 0.942 37 H 0.078 0.922 38 H 0.070 0.930 39 H 0.080 0.920 40 H 0.037 0.963 41 H 0.089 0.911 42 H 0.119 0.881 43 H 0.081 0.919 44 H 0.081 0.919 45 H 0.047 0.953 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.649 -3.492 11.203 14.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.181 4.181 3 C 0.022 3.978 4 N -0.315 5.315 5 C 0.081 3.919 6 C -0.580 4.580 7 H 0.097 0.903 8 C -0.125 4.125 9 N -0.524 5.524 10 Si 0.694 3.306 11 H -0.197 1.197 12 H -0.190 1.190 13 H -0.209 1.209 14 C 0.317 3.683 15 O -0.451 6.451 16 C -0.127 4.127 17 H 0.148 0.852 18 C -0.150 4.150 19 C -0.152 4.152 20 C -0.089 4.089 21 N -0.255 5.255 22 C -0.119 4.119 23 C 0.402 3.598 24 F -0.149 7.149 25 F -0.170 7.170 26 F -0.167 7.167 27 C -0.043 4.043 28 H 0.109 0.891 29 H 0.114 0.886 30 H 0.122 0.878 31 H 0.094 0.906 32 H 0.106 0.894 33 H 0.051 0.949 34 H 0.054 0.946 35 H 0.077 0.923 36 H 0.077 0.923 37 H 0.097 0.903 38 H 0.088 0.912 39 H 0.099 0.901 40 H 0.056 0.944 41 H 0.107 0.893 42 H 0.137 0.863 43 H 0.099 0.901 44 H 0.100 0.900 45 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -7.561 -3.108 11.049 13.744 hybrid contribution 0.170 -1.068 0.318 1.127 sum -7.390 -4.176 11.366 14.186 Atomic orbital electron populations 1.23731 0.95855 1.01353 1.01219 1.23375 0.96188 0.99198 0.99306 1.20431 0.92353 0.94785 0.90222 1.47879 1.12106 1.63400 1.08117 1.20009 0.77803 0.96614 0.97456 1.21336 0.92261 0.94045 1.50347 0.90312 1.24854 0.96955 0.96452 0.94205 1.69883 1.06007 1.29296 1.47206 0.86987 0.79632 0.85180 0.78829 1.19650 1.18978 1.20916 1.20309 0.88187 0.75970 0.83850 1.90587 1.18648 1.52314 1.83538 1.21321 1.01211 0.97097 0.93103 0.85188 1.21628 0.99467 0.95865 0.98060 1.21561 0.99913 0.98533 0.95163 1.22530 1.00157 0.88227 0.97937 1.61623 1.46346 1.09106 1.08405 1.23146 0.92532 1.00248 0.95964 1.20574 0.85441 0.75168 0.78605 1.93240 1.64279 1.87190 1.70225 1.93168 1.89678 1.62484 1.71696 1.93091 1.88434 1.56454 1.78700 1.21834 0.92057 1.00668 0.89707 0.89065 0.88577 0.87766 0.90573 0.89387 0.94859 0.94646 0.92327 0.92327 0.90346 0.91162 0.90083 0.94449 0.89308 0.86327 0.90125 0.90012 0.93503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.54 14.32 29.01 0.42 -2.12 16 2 C -0.16 -2.48 9.82 -36.03 -0.35 -2.83 16 3 C 0.14 2.54 5.75 -5.20 -0.03 2.51 16 4 N -0.59 -11.50 2.46 -176.44 -0.43 -11.93 16 5 C 0.20 4.26 3.90 -5.20 -0.02 4.24 16 6 C -0.54 -13.71 8.75 -34.44 -0.30 -14.01 16 7 H 0.08 2.25 8.06 -52.49 -0.42 1.83 16 8 C 0.08 2.09 5.47 -17.82 -0.10 1.99 16 9 N -0.89 -25.30 13.96 55.43 0.77 -24.53 16 10 Si 0.87 19.31 27.47 -169.99 -4.67 14.64 16 11 H -0.27 -5.91 7.11 56.52 0.40 -5.50 16 12 H -0.27 -5.56 6.54 56.52 0.37 -5.19 16 13 H -0.28 -6.42 7.11 56.52 0.40 -6.01 16 14 C 0.53 10.32 6.79 -10.98 -0.07 10.24 16 15 O -0.57 -11.94 15.70 5.56 0.09 -11.85 16 16 C -0.11 -1.85 1.88 -91.69 -0.17 -2.02 16 17 H 0.13 2.66 6.59 -51.93 -0.34 2.31 16 18 C -0.11 -1.70 5.05 -26.61 -0.13 -1.84 16 19 C -0.11 -1.53 6.09 -26.65 -0.16 -1.69 16 20 C 0.04 0.48 5.23 -3.83 -0.02 0.46 16 21 N -0.53 -7.27 4.41 -234.67 -1.03 -8.30 16 22 C 0.01 0.13 5.12 -3.83 -0.02 0.11 16 23 C 0.46 5.53 3.28 37.16 0.12 5.65 16 24 F -0.17 -2.48 17.14 2.25 0.04 -2.44 16 25 F -0.19 -2.19 17.32 2.25 0.04 -2.16 16 26 F -0.19 -2.28 14.67 2.25 0.03 -2.25 16 27 C 0.08 1.29 4.17 -3.83 -0.02 1.27 16 28 H 0.09 1.08 8.06 -52.49 -0.42 0.65 16 29 H 0.10 1.32 7.84 -52.48 -0.41 0.91 16 30 H 0.10 1.53 8.06 -52.48 -0.42 1.11 16 31 H 0.08 1.36 7.26 -51.93 -0.38 0.98 16 32 H 0.09 1.51 8.04 -51.93 -0.42 1.09 16 33 H 0.03 0.70 7.09 -51.93 -0.37 0.33 16 34 H 0.04 0.72 4.08 -51.93 -0.21 0.51 16 35 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 36 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 37 H 0.08 1.24 5.65 -51.93 -0.29 0.95 16 38 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 39 H 0.08 1.23 8.14 -51.93 -0.42 0.80 16 40 H 0.04 0.43 8.14 -51.93 -0.42 0.00 16 41 H 0.09 1.06 5.48 -51.92 -0.28 0.77 16 42 H 0.12 1.17 7.77 -51.93 -0.40 0.76 16 43 H 0.08 0.72 7.98 -51.93 -0.41 0.31 16 44 H 0.08 1.28 7.92 -51.93 -0.41 0.87 16 45 H 0.05 0.70 7.88 -51.93 -0.41 0.29 16 LS Contribution 368.12 15.07 5.55 5.55 Total: -1.00 -28.95 368.12 -6.96 -35.91 By element: Atomic # 1 Polarization: 11.86 SS G_CDS: -6.47 Total: 5.39 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -0.86 Total: 1.97 kcal Atomic # 7 Polarization: -44.07 SS G_CDS: -0.70 Total: -44.76 kcal Atomic # 8 Polarization: -11.94 SS G_CDS: 0.09 Total: -11.85 kcal Atomic # 9 Polarization: -6.96 SS G_CDS: 0.11 Total: -6.85 kcal Atomic # 14 Polarization: 19.31 SS G_CDS: -4.67 Total: 14.64 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -28.95 -6.96 -35.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292254176.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.261 kcal (2) G-P(sol) polarization free energy of solvation -28.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds