Wall clock time and date at job start Tue Mar 31 2020 19:09:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35664 * 117.00199 * 2 1 4 4 C 1.40222 * 120.14333 * 275.04847 * 3 2 1 5 5 C 1.47402 * 120.18710 * 359.97438 * 4 3 2 6 6 O 1.21509 * 120.00057 * 0.02562 * 5 4 3 7 7 O 1.34751 * 119.99850 * 180.02562 * 5 4 3 8 8 C 1.39728 * 119.62008 * 180.02562 * 4 3 2 9 9 C 1.37913 * 119.88966 * 0.02562 * 8 4 3 10 10 Cl 1.73598 * 119.86021 * 179.97438 * 9 8 4 11 11 C 1.38621 * 120.27963 * 359.97438 * 9 8 4 12 12 C 1.38092 * 120.38766 * 359.97438 * 11 9 8 13 13 S 1.76197 * 119.94490 * 179.97438 * 12 11 9 14 14 O 1.42103 * 106.40299 * 357.44702 * 13 12 11 15 15 O 1.42102 * 106.40283 * 130.36770 * 13 12 11 16 16 N 1.65602 * 107.21979 * 243.90468 * 13 12 11 17 17 C 1.36935 * 119.99745 * 63.66559 * 16 13 12 18 18 H 1.07999 * 120.00272 * 5.10498 * 17 16 13 19 19 C 1.38811 * 119.99854 * 185.10380 * 17 16 13 20 20 N 1.31611 * 120.00156 * 359.97438 * 19 17 16 21 21 Si 1.86802 * 119.99840 * 180.02562 * 19 17 16 22 22 H 1.48497 * 109.47585 * 59.99829 * 21 19 17 23 23 H 1.48505 * 109.47054 * 179.97438 * 21 19 17 24 24 H 1.48501 * 109.47344 * 299.99957 * 21 19 17 25 25 H 1.08996 * 109.46865 * 185.55879 * 1 2 3 26 26 H 1.08994 * 109.47115 * 305.55835 * 1 2 3 27 27 H 1.09000 * 109.46741 * 65.55973 * 1 2 3 28 28 H 0.96705 * 117.00094 * 179.97438 * 7 5 4 29 29 H 1.08003 * 120.05486 * 179.97438 * 8 4 3 30 30 H 1.07998 * 119.80170 * 180.28075 * 11 9 8 31 31 H 0.96996 * 120.00363 * 243.65949 * 16 13 12 32 32 H 0.97006 * 120.00291 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 2.2696 1.8846 -1.2079 5 6 1.8384 1.2854 -2.4837 6 8 1.2862 0.2031 -2.4907 7 8 2.0566 1.9380 -3.6423 8 6 2.9054 3.1288 -1.1952 9 6 3.3077 3.6828 0.0019 10 17 4.0982 5.2283 0.0167 11 6 3.0834 3.0109 1.1935 12 6 2.4551 1.7812 1.1944 13 16 2.1765 0.9370 2.7157 14 8 2.7580 1.7409 3.7330 15 8 0.8087 0.5518 2.7163 16 7 3.0570 -0.4647 2.6669 17 6 4.4236 -0.4128 2.5987 18 1 4.9316 0.5383 2.6598 19 6 5.1561 -1.5826 2.4510 20 7 4.5371 -2.7417 2.3770 21 14 7.0205 -1.5118 2.3586 22 1 7.5554 -0.9087 3.6057 23 1 7.5609 -2.8862 2.2027 24 1 7.4275 -0.6843 1.1946 25 1 -0.3633 -1.0228 0.0995 26 1 -0.3633 0.5976 0.8360 27 1 -0.3633 0.4252 -0.9356 28 1 1.7565 1.5051 -4.4533 29 1 3.0823 3.6552 -2.1215 30 1 3.3975 3.4540 2.1269 31 1 2.6046 -1.3225 2.6867 32 1 5.0490 -3.5592 2.2734 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000040605455.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:09:21 Heat of formation + Delta-G solvation = -171.798774 kcal Electronic energy + Delta-G solvation = -25326.466288 eV Core-core repulsion = 21213.090787 eV Total energy + Delta-G solvation = -4113.375501 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 335.015 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -40.69431 -39.10130 -37.63091 -36.25321 -36.02947 -35.79897 -34.76378 -34.67072 -31.67180 -31.12476 -30.10320 -26.69825 -24.79712 -24.61553 -23.04764 -21.31469 -18.96906 -18.31523 -17.96905 -17.90770 -17.05026 -16.59676 -16.23198 -15.80114 -15.58173 -15.22451 -14.97178 -14.69836 -14.32882 -13.79895 -13.76692 -13.43914 -13.27593 -12.75437 -12.39189 -12.07472 -11.66650 -11.58252 -11.40692 -11.21273 -11.16398 -11.14608 -10.96416 -10.88234 -10.68773 -10.62459 -10.38653 -10.09717 -10.03907 -9.66903 -9.39271 -8.62949 -8.40668 -6.67955 -4.00399 0.49097 0.81962 1.51077 2.02123 2.40357 2.90028 3.13393 3.14964 3.17551 3.30640 3.86342 3.95902 4.35315 4.66295 4.75004 4.83469 5.01803 5.08997 5.16549 5.52217 5.61086 5.67664 5.81476 5.85762 5.96318 6.09568 6.19834 6.33977 6.43665 6.91864 7.30193 7.57552 7.85054 8.51664 8.60467 9.08178 10.45284 Molecular weight = 335.02amu Principal moments of inertia in cm(-1) A = 0.009793 B = 0.005826 C = 0.005301 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2858.571279 B = 4804.647088 C = 5280.595758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 O -0.316 6.316 3 C 0.269 3.731 4 C -0.173 4.173 5 C 0.528 3.472 6 O -0.489 6.489 7 O -0.516 6.516 8 C -0.010 4.010 9 C -0.083 4.083 10 Cl -0.064 7.064 11 C 0.029 3.971 12 C -0.674 4.674 13 S 2.563 3.437 14 O -0.974 6.974 15 O -0.999 6.999 16 N -0.918 5.918 17 C -0.249 4.249 18 H 0.108 0.892 19 C 0.033 3.967 20 N -0.849 5.849 21 Si 0.924 3.076 22 H -0.266 1.266 23 H -0.279 1.279 24 H -0.269 1.269 25 H 0.098 0.902 26 H 0.071 0.929 27 H 0.041 0.959 28 H 0.413 0.587 29 H 0.151 0.849 30 H 0.158 0.842 31 H 0.413 0.587 32 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.653 8.965 -8.901 12.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 O -0.232 6.232 3 C 0.222 3.778 4 C -0.175 4.175 5 C 0.371 3.629 6 O -0.376 6.376 7 O -0.329 6.329 8 C -0.029 4.029 9 C -0.110 4.110 10 Cl -0.035 7.035 11 C 0.009 3.991 12 C -0.750 4.750 13 S 2.653 3.347 14 O -0.963 6.963 15 O -0.987 6.987 16 N -0.667 5.667 17 C -0.396 4.396 18 H 0.125 0.875 19 C -0.178 4.178 20 N -0.489 5.489 21 Si 0.750 3.250 22 H -0.191 1.191 23 H -0.204 1.204 24 H -0.194 1.194 25 H 0.117 0.883 26 H 0.090 0.910 27 H 0.060 0.940 28 H 0.272 0.728 29 H 0.169 0.831 30 H 0.176 0.824 31 H 0.249 0.751 32 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -3.179 9.283 -7.964 12.637 hybrid contribution 0.871 -0.280 -1.642 1.880 sum -2.308 9.003 -9.606 13.367 Atomic orbital electron populations 1.23116 0.76237 1.04655 1.00687 1.85950 1.21402 1.22009 1.93794 1.18124 0.87599 0.82882 0.89211 1.19402 1.09977 0.97224 0.90909 1.20443 0.76019 0.82691 0.83715 1.90953 1.38902 1.20437 1.87327 1.84548 1.77745 1.53153 1.17416 1.21277 0.91472 0.92525 0.97667 1.20888 1.04746 0.90320 0.95086 1.98363 1.78919 1.27318 1.98902 1.21078 0.88998 0.91000 0.97995 1.32839 1.11328 1.06675 1.24130 1.10029 0.73969 0.73732 0.76939 1.93433 1.78600 1.69589 1.54713 1.93349 1.35646 1.82068 1.87653 1.52127 1.14384 1.21632 1.78572 1.19528 0.80472 0.95759 1.43847 0.87455 1.25461 1.01110 0.94938 0.96323 1.69694 1.37567 0.98250 1.43434 0.86008 0.81453 0.78007 0.79557 1.19127 1.20408 1.19401 0.88343 0.91015 0.93996 0.72844 0.83102 0.82422 0.75065 0.90932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 24. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.80 9.78 101.05 0.99 1.79 16 2 O -0.32 -6.44 8.11 -45.50 -0.37 -6.81 16 3 C 0.27 5.20 5.69 -38.68 -0.22 4.98 16 4 C -0.17 -2.87 5.88 -104.87 -0.62 -3.48 16 5 C 0.53 8.03 8.24 34.46 0.28 8.31 16 6 O -0.49 -8.63 14.17 -26.60 -0.38 -9.01 16 7 O -0.52 -5.55 12.68 -40.63 -0.52 -6.07 16 8 C -0.01 -0.15 9.39 -39.14 -0.37 -0.51 16 9 C -0.08 -1.25 6.31 -39.56 -0.25 -1.50 16 10 Cl -0.06 -0.81 28.94 -51.86 -1.50 -2.31 16 11 C 0.03 0.50 9.32 -39.49 -0.37 0.13 16 12 C -0.67 -13.21 5.80 -39.48 -0.23 -13.44 16 13 S 2.56 56.39 5.26 -107.50 -0.56 55.82 16 14 O -0.97 -22.94 16.68 -57.17 -0.95 -23.89 16 15 O -1.00 -22.64 15.10 -62.07 -0.94 -23.58 16 16 N -0.92 -21.77 5.74 31.50 0.18 -21.59 16 17 C -0.25 -6.08 9.63 -15.06 -0.15 -6.22 16 18 H 0.11 2.48 7.82 -52.49 -0.41 2.07 16 19 C 0.03 0.81 5.50 -17.43 -0.10 0.72 16 20 N -0.85 -21.54 13.06 55.49 0.72 -20.82 16 21 Si 0.92 18.81 29.55 -169.99 -5.02 13.79 16 22 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 23 H -0.28 -5.62 7.11 56.52 0.40 -5.21 16 24 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 25 H 0.10 1.55 8.14 -51.93 -0.42 1.13 16 26 H 0.07 1.26 6.38 -51.93 -0.33 0.93 16 27 H 0.04 0.66 6.82 -51.93 -0.35 0.30 16 28 H 0.41 2.46 9.11 45.56 0.42 2.87 16 29 H 0.15 1.73 7.61 -52.48 -0.40 1.33 16 30 H 0.16 2.57 7.32 -52.49 -0.38 2.19 16 31 H 0.41 9.99 8.04 -34.47 -0.28 9.71 16 32 H 0.28 6.67 8.31 -40.82 -0.34 6.33 16 LS Contribution 315.69 15.07 4.76 4.76 Total: -1.00 -30.32 315.69 -6.90 -37.21 By element: Atomic # 1 Polarization: 13.03 SS G_CDS: -1.30 Total: 11.73 kcal Atomic # 6 Polarization: -8.21 SS G_CDS: -1.02 Total: -9.23 kcal Atomic # 7 Polarization: -43.31 SS G_CDS: 0.91 Total: -42.41 kcal Atomic # 8 Polarization: -66.21 SS G_CDS: -3.15 Total: -69.36 kcal Atomic # 14 Polarization: 18.81 SS G_CDS: -5.02 Total: 13.79 kcal Atomic # 16 Polarization: 56.39 SS G_CDS: -0.56 Total: 55.82 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.31 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -30.32 -6.90 -37.21 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000040605455.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.585 kcal (2) G-P(sol) polarization free energy of solvation -30.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.799 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds