Wall clock time and date at job start Tue Mar 31 2020 19:15:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39567 * 120.12267 * 5.92536 * 3 2 1 5 5 C 1.38595 * 119.77750 * 180.29943 * 4 3 2 6 6 N 1.39791 * 119.98387 * 179.97438 * 5 4 3 7 7 C 1.34779 * 120.00132 * 324.86644 * 6 5 4 8 8 O 1.21377 * 120.00042 * 4.60754 * 7 6 5 9 9 C 1.49356 * 119.99878 * 184.60275 * 7 6 5 10 10 O 1.21357 * 120.00036 * 359.97438 * 9 7 6 11 11 N 1.34770 * 119.99669 * 179.97438 * 9 7 6 12 12 C 1.46497 * 120.00109 * 180.02562 * 11 9 7 13 13 C 1.52996 * 109.47637 * 180.02562 * 12 11 9 14 14 C 1.52996 * 109.47495 * 179.97438 * 13 12 11 15 15 C 1.50708 * 109.47386 * 179.97438 * 14 13 12 16 16 H 1.07997 * 119.99484 * 359.97438 * 15 14 13 17 17 C 1.37876 * 119.99869 * 179.97438 * 15 14 13 18 18 N 1.31516 * 119.99536 * 179.97438 * 17 15 14 19 19 Si 1.86794 * 120.00194 * 0.02562 * 17 15 14 20 20 H 1.48499 * 109.47671 * 90.00044 * 19 17 15 21 21 H 1.48507 * 109.46859 * 209.99819 * 19 17 15 22 22 H 1.48502 * 109.47120 * 329.99498 * 19 17 15 23 23 C 1.39072 * 120.03602 * 359.97402 * 5 4 3 24 24 C 1.38159 * 120.24780 * 0.02562 * 23 5 4 25 25 C 1.38168 * 120.21859 * 0.02562 * 24 23 5 26 26 Cl 1.73605 * 120.01391 * 179.97438 * 25 24 23 27 27 H 1.08006 * 120.11043 * 0.27138 * 4 3 2 28 28 H 0.97001 * 119.99851 * 144.85961 * 6 5 4 29 29 H 0.97005 * 120.00227 * 359.97438 * 11 9 7 30 30 H 1.09005 * 109.46997 * 300.00039 * 12 11 9 31 31 H 1.08993 * 109.47648 * 59.99616 * 12 11 9 32 32 H 1.09005 * 109.46751 * 299.99934 * 13 12 11 33 33 H 1.09001 * 109.47363 * 59.99622 * 13 12 11 34 34 H 1.09005 * 109.47201 * 299.99822 * 14 13 12 35 35 H 1.09001 * 109.47472 * 59.99780 * 14 13 12 36 36 H 0.96996 * 119.99786 * 180.02562 * 18 17 15 37 37 H 1.07997 * 119.87874 * 179.97438 * 23 5 4 38 38 H 1.08003 * 119.88678 * 179.97438 * 24 23 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2690 -1.1998 -0.1246 5 6 4.6549 -1.1915 -0.1175 6 7 5.3613 -2.3914 -0.2415 7 6 4.8752 -3.5200 0.3122 8 8 3.7851 -3.5133 0.8459 9 6 5.6779 -4.7788 0.2689 10 8 6.7676 -4.7855 -0.2652 11 7 5.1920 -5.9071 0.8230 12 6 5.9794 -7.1417 0.7811 13 6 5.2052 -8.2644 1.4746 14 6 6.0273 -9.5539 1.4302 15 6 5.2649 -10.6596 2.1139 16 1 4.2915 -10.4621 2.5379 17 6 5.8101 -11.9232 2.1979 18 7 5.1449 -12.8879 2.7950 19 14 7.4940 -12.2645 1.4650 20 1 8.5397 -12.0154 2.4896 21 1 7.5631 -13.6801 1.0214 22 1 7.7180 -11.3696 0.3013 23 6 5.3432 0.0099 0.0129 24 6 4.6506 1.1989 0.1364 25 6 3.2689 1.2026 0.1316 26 17 2.4040 2.6997 0.2877 27 1 2.7332 -2.1321 -0.2258 28 1 6.2014 -2.4118 -0.7261 29 1 4.3211 -5.9016 1.2502 30 1 6.1675 -7.4177 -0.2565 31 1 6.9288 -6.9848 1.2929 32 1 5.0168 -7.9886 2.5122 33 1 4.2559 -8.4214 0.9623 34 1 6.2153 -9.8295 0.3925 35 1 6.9768 -9.3973 1.9423 36 1 5.5286 -13.7768 2.8544 37 1 6.4232 0.0133 0.0186 38 1 5.1910 2.1285 0.2377 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000171474678.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:15:56 Heat of formation + Delta-G solvation = -23.188607 kcal Electronic energy + Delta-G solvation = -23949.457249 eV Core-core repulsion = 20011.040957 eV Total energy + Delta-G solvation = -3938.416292 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 335.082 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.58004 -40.07670 -38.78627 -37.22520 -36.94780 -36.07166 -35.16861 -33.43097 -32.14713 -31.58025 -30.44986 -27.79778 -25.45465 -24.87280 -23.42215 -22.32200 -20.96553 -20.37948 -19.96332 -18.63542 -17.54417 -17.15622 -16.85057 -16.65054 -16.39302 -16.02671 -15.49924 -15.09157 -14.81326 -14.61008 -14.35852 -13.94274 -13.86516 -13.74768 -13.55532 -13.31547 -12.87154 -12.78027 -12.68069 -12.34455 -12.18915 -12.05609 -11.95846 -11.54275 -11.20106 -10.97952 -10.84241 -10.30272 -10.09092 -9.89069 -9.77983 -9.68508 -9.29609 -9.25998 -8.88495 -8.60752 -6.10904 -4.10367 -0.08451 0.35119 1.06176 1.38646 1.83510 2.21205 2.31900 2.84778 3.11533 3.17504 3.26561 3.34423 3.35369 3.37068 4.02982 4.13371 4.26915 4.39162 4.48916 4.52652 4.95956 5.10828 5.22504 5.30704 5.35628 5.37218 5.45545 5.50352 5.82119 5.96442 5.97910 6.29337 6.35160 6.49198 6.65721 6.99300 7.01988 7.13249 7.26451 7.30115 7.69021 7.72186 8.44762 8.92925 9.50569 11.02257 Molecular weight = 335.08amu Principal moments of inertia in cm(-1) A = 0.027693 B = 0.001736 C = 0.001652 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1010.830854 B =16122.469287 C =16947.930979 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.390 5.390 2 C 0.249 3.751 3 C 0.004 3.996 4 C -0.064 4.064 5 C 0.151 3.849 6 N -0.647 5.647 7 C 0.511 3.489 8 O -0.494 6.494 9 C 0.505 3.495 10 O -0.521 6.521 11 N -0.686 5.686 12 C 0.111 3.889 13 C -0.116 4.116 14 C -0.010 4.010 15 C -0.524 4.524 16 H 0.073 0.927 17 C 0.067 3.933 18 N -0.901 5.901 19 Si 0.880 3.120 20 H -0.277 1.277 21 H -0.287 1.287 22 H -0.265 1.265 23 C -0.098 4.098 24 C -0.088 4.088 25 C -0.011 4.011 26 Cl -0.050 7.050 27 H 0.160 0.840 28 H 0.429 0.571 29 H 0.414 0.586 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.064 0.936 33 H 0.064 0.936 34 H 0.020 0.980 35 H 0.015 0.985 36 H 0.264 0.736 37 H 0.149 0.851 38 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.062 32.126 -7.791 33.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.065 5.065 2 C -0.067 4.067 3 C 0.000 4.000 4 C -0.087 4.087 5 C 0.056 3.944 6 N -0.295 5.295 7 C 0.294 3.706 8 O -0.367 6.367 9 C 0.284 3.716 10 O -0.397 6.397 11 N -0.338 5.338 12 C -0.011 4.011 13 C -0.154 4.154 14 C -0.048 4.048 15 C -0.562 4.562 16 H 0.091 0.909 17 C -0.135 4.135 18 N -0.540 5.540 19 Si 0.708 3.292 20 H -0.202 1.202 21 H -0.213 1.213 22 H -0.189 1.189 23 C -0.119 4.119 24 C -0.107 4.107 25 C -0.041 4.041 26 Cl -0.020 7.020 27 H 0.178 0.822 28 H 0.268 0.732 29 H 0.250 0.750 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.038 0.962 35 H 0.033 0.967 36 H 0.074 0.926 37 H 0.167 0.833 38 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 0.250 31.944 -7.702 32.860 hybrid contribution 1.243 -0.245 -0.266 1.295 sum 1.493 31.699 -7.967 32.719 Atomic orbital electron populations 1.81261 1.11599 1.06362 1.07259 1.25247 0.92255 0.94499 0.94697 1.15580 0.85045 0.92632 1.06781 1.21346 0.92760 0.97743 0.96841 1.17547 0.90726 0.85679 1.00472 1.43154 1.26505 1.05909 1.53952 1.20628 0.86551 0.85060 0.78398 1.90802 1.19809 1.84574 1.41473 1.19631 0.86440 0.84492 0.81036 1.90794 1.20393 1.84964 1.43589 1.46036 1.22984 1.09261 1.55519 1.21912 0.95094 0.81874 1.02230 1.21757 0.99466 0.94281 0.99894 1.19503 0.95640 0.92377 0.97287 1.21078 1.05271 0.93074 1.36815 0.90933 1.25035 0.97560 0.96156 0.94733 1.69910 1.38346 1.02228 1.43484 0.86770 0.84722 0.77547 0.80201 1.20237 1.21340 1.18925 1.21173 1.01177 0.90188 0.99364 1.20821 0.90948 0.99278 0.99633 1.20974 0.92753 0.86617 1.03742 1.98420 1.76569 1.31189 1.95856 0.82211 0.73158 0.74972 0.90848 0.90855 0.91737 0.91716 0.96213 0.96650 0.92637 0.83304 0.83028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -4.77 18.54 41.84 0.78 -3.99 16 2 C 0.25 2.50 14.37 -22.47 -0.32 2.18 16 3 C 0.00 0.03 5.73 -106.91 -0.61 -0.58 16 4 C -0.06 -0.49 8.40 -38.95 -0.33 -0.82 16 5 C 0.15 0.93 6.29 -83.79 -0.53 0.40 16 6 N -0.65 -4.29 5.32 -10.32 -0.05 -4.35 16 7 C 0.51 4.91 7.73 -11.63 -0.09 4.82 16 8 O -0.49 -5.60 13.91 5.47 0.08 -5.53 16 9 C 0.51 5.82 7.89 -11.63 -0.09 5.73 16 10 O -0.52 -6.96 16.48 5.49 0.09 -6.87 16 11 N -0.69 -8.28 5.55 -60.77 -0.34 -8.62 16 12 C 0.11 1.58 5.67 -4.05 -0.02 1.56 16 13 C -0.12 -1.99 5.27 -26.74 -0.14 -2.13 16 14 C -0.01 -0.22 4.04 -27.88 -0.11 -0.34 16 15 C -0.52 -14.33 9.66 -34.44 -0.33 -14.66 16 16 H 0.07 2.13 7.99 -52.49 -0.42 1.71 16 17 C 0.07 1.89 5.47 -17.82 -0.10 1.79 16 18 N -0.90 -27.20 13.96 55.43 0.77 -26.43 16 19 Si 0.88 21.03 27.47 -169.99 -4.67 16.36 16 20 H -0.28 -6.50 7.11 56.52 0.40 -6.09 16 21 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 22 H -0.26 -6.02 6.54 56.52 0.37 -5.65 16 23 C -0.10 -0.36 9.96 -39.30 -0.39 -0.75 16 24 C -0.09 -0.33 9.81 -39.64 -0.39 -0.72 16 25 C -0.01 -0.07 6.35 -39.04 -0.25 -0.31 16 26 Cl -0.05 -0.34 28.01 -51.86 -1.45 -1.79 16 27 H 0.16 1.41 6.22 -52.48 -0.33 1.09 16 28 H 0.43 2.04 8.30 -40.82 -0.34 1.70 16 29 H 0.41 4.54 7.94 -40.82 -0.32 4.21 16 30 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 31 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 32 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 33 H 0.06 1.10 8.14 -51.93 -0.42 0.68 16 34 H 0.02 0.43 7.20 -51.93 -0.37 0.06 16 35 H 0.02 0.33 7.57 -51.93 -0.39 -0.06 16 36 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 37 H 0.15 0.16 8.06 -52.49 -0.42 -0.27 16 38 H 0.15 0.22 8.06 -52.48 -0.42 -0.20 16 LS Contribution 358.83 15.07 5.41 5.41 Total: -1.00 -32.89 358.83 -6.98 -39.87 By element: Atomic # 1 Polarization: 3.66 SS G_CDS: -3.88 Total: -0.22 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: -3.71 Total: -3.84 kcal Atomic # 7 Polarization: -44.55 SS G_CDS: 1.16 Total: -43.39 kcal Atomic # 8 Polarization: -12.57 SS G_CDS: 0.17 Total: -12.40 kcal Atomic # 14 Polarization: 21.03 SS G_CDS: -4.67 Total: 16.36 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -1.45 Total: -1.79 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -32.89 -6.98 -39.87 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000171474678.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.679 kcal (2) G-P(sol) polarization free energy of solvation -32.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.976 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds