Wall clock time and date at job start Tue Mar 31 2020 18:16:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34231 * 116.99943 * 2 1 4 4 O 1.20827 * 119.99781 * 359.97438 * 3 2 1 5 5 C 1.50693 * 119.99761 * 180.02562 * 3 2 1 6 6 N 1.46499 * 109.47185 * 179.97438 * 5 3 2 7 7 C 1.37103 * 119.99667 * 263.99274 * 6 5 3 8 8 H 1.08007 * 119.99784 * 197.01175 * 7 6 5 9 9 C 1.38943 * 120.00508 * 17.00711 * 7 6 5 10 10 N 1.31416 * 119.99506 * 21.26013 * 9 7 6 11 11 Si 1.86797 * 120.00567 * 201.25609 * 9 7 6 12 12 H 1.48500 * 109.46997 * 90.00030 * 11 9 7 13 13 H 1.48500 * 109.47238 * 210.00243 * 11 9 7 14 14 H 1.48507 * 109.46972 * 330.00124 * 11 9 7 15 15 C 1.34776 * 120.00259 * 83.98541 * 6 5 3 16 16 O 1.21286 * 119.99957 * 0.02562 * 15 6 5 17 17 C 1.50704 * 119.99905 * 180.27615 * 15 6 5 18 18 O 1.42899 * 109.46997 * 179.72867 * 17 15 6 19 19 C 1.35896 * 117.00167 * 180.02562 * 18 17 15 20 20 C 1.38752 * 120.05424 * 359.72893 * 19 18 17 21 21 C 1.38132 * 119.94259 * 179.70052 * 20 19 18 22 22 C 1.38283 * 120.05207 * 0.59117 * 21 20 19 23 23 C 1.38236 * 120.11586 * 359.68005 * 22 21 20 24 24 C 1.50701 * 119.97184 * 180.02562 * 23 22 21 25 25 C 1.52996 * 109.47383 * 299.97870 * 24 23 22 26 26 C 1.53002 * 109.46991 * 59.98356 * 24 23 22 27 27 C 1.38170 * 120.05586 * 0.02562 * 23 22 21 28 28 H 1.09004 * 109.46826 * 59.99973 * 1 2 3 29 29 H 1.08995 * 109.47349 * 180.02562 * 1 2 3 30 30 H 1.09006 * 109.47137 * 300.00658 * 1 2 3 31 31 H 1.08992 * 109.47376 * 59.99887 * 5 3 2 32 32 H 1.09003 * 109.47391 * 299.99693 * 5 3 2 33 33 H 0.96999 * 119.99878 * 180.02562 * 10 9 7 34 34 H 1.09000 * 109.47258 * 299.72882 * 17 15 6 35 35 H 1.08998 * 109.46881 * 59.73150 * 17 15 6 36 36 H 1.07997 * 120.03116 * 359.96839 * 20 19 18 37 37 H 1.07998 * 119.96872 * 180.29186 * 21 20 19 38 38 H 1.08005 * 119.93977 * 179.70250 * 22 21 20 39 39 H 1.09005 * 109.47219 * 179.97438 * 24 23 22 40 40 H 1.08996 * 109.47141 * 60.00009 * 25 24 23 41 41 H 1.09004 * 109.47047 * 179.97438 * 25 24 23 42 42 H 1.08998 * 109.47488 * 300.00103 * 25 24 23 43 43 H 1.09000 * 109.47481 * 59.99438 * 26 24 23 44 44 H 1.09004 * 109.47348 * 179.97438 * 26 24 23 45 45 H 1.08996 * 109.46788 * 299.99535 * 26 24 23 46 46 H 1.07999 * 120.02718 * 180.02562 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 3.9817 2.6797 -0.0011 7 6 4.2948 3.3015 -1.1822 8 1 4.8541 4.2254 -1.1744 9 6 3.8928 2.7430 -2.3893 10 7 2.8930 1.8907 -2.4182 11 14 4.7732 3.2038 -3.9710 12 1 5.9033 2.2678 -4.1992 13 1 3.8231 3.1196 -5.1091 14 1 5.2934 4.5906 -3.8620 15 6 4.0560 3.3609 1.1595 16 8 3.7793 2.8108 2.2044 17 6 4.4774 4.8079 1.1582 18 8 4.4727 5.3065 2.4974 19 6 4.8306 6.6056 2.6733 20 6 5.1847 7.3830 1.5799 21 6 5.5422 8.7050 1.7607 22 6 5.5591 9.2502 3.0314 23 6 5.2122 8.4762 4.1229 24 6 5.2313 9.0739 5.5062 25 6 6.6448 9.5603 5.8323 26 6 4.2595 10.2542 5.5653 27 6 4.8481 7.1551 3.9468 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5140 0.8900 31 1 3.9557 0.7809 -0.8907 32 1 3.9564 0.7806 0.8892 33 1 2.6125 1.5005 -3.2608 34 1 5.4811 4.8936 0.7421 35 1 3.7819 5.3882 0.5520 36 1 5.1766 6.9562 0.5879 37 1 5.8132 9.3118 0.9094 38 1 5.8436 10.2827 3.1711 39 1 4.9303 8.3188 6.2325 40 1 6.9458 10.3153 5.1061 41 1 6.6584 9.9930 6.8326 42 1 7.3371 8.7195 5.7902 43 1 3.2525 9.9077 5.3330 44 1 4.2729 10.6862 6.5659 45 1 4.5604 11.0092 4.8391 46 1 4.5767 6.5509 4.7999 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000120582494.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:16:43 Heat of formation + Delta-G solvation = -128.583067 kcal Electronic energy + Delta-G solvation = -28948.059408 eV Core-core repulsion = 24803.737143 eV Total energy + Delta-G solvation = -4144.322265 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -40.10335 -39.47510 -38.50042 -37.46782 -35.45577 -34.85441 -34.64285 -31.72828 -30.75818 -29.42195 -28.93765 -27.34510 -27.27865 -26.03404 -24.66818 -23.05061 -22.42782 -20.61389 -19.86408 -19.32703 -17.57877 -17.43444 -16.65346 -16.27501 -15.76940 -15.73400 -15.52774 -15.35153 -15.14818 -14.89999 -14.42630 -14.27092 -13.88951 -13.71120 -13.45217 -13.30966 -12.97357 -12.61214 -12.54691 -12.38569 -12.37904 -11.98218 -11.86353 -11.67249 -11.40406 -11.33473 -11.27645 -11.24962 -10.88007 -10.85304 -10.69618 -10.57084 -10.52195 -10.43403 -9.85084 -9.67462 -9.10092 -8.69800 -8.68158 -8.09528 -7.93403 -6.63252 -4.14377 1.45094 1.62877 2.99051 3.10093 3.13656 3.23013 3.48888 3.63984 3.89062 3.92747 3.99796 4.55863 4.70836 4.81333 4.85998 5.00153 5.07555 5.27025 5.27437 5.41266 5.46940 5.52382 5.58783 5.67363 5.68089 5.73404 5.75264 5.77199 5.83334 5.90214 5.91935 5.95467 6.08615 6.10299 6.17054 6.18132 6.34946 6.51046 6.54419 6.59623 6.70338 6.94229 7.17266 7.36381 7.48708 7.73795 8.08689 8.83696 9.04736 9.19857 9.60349 10.43809 Molecular weight = 335.16amu Principal moments of inertia in cm(-1) A = 0.014235 B = 0.002884 C = 0.002521 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1966.529422 B = 9705.811099 C =11102.909351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 O -0.375 6.375 3 C 0.484 3.516 4 O -0.499 6.499 5 C 0.159 3.841 6 N -0.425 5.425 7 C -0.347 4.347 8 H 0.104 0.896 9 C 0.042 3.958 10 N -0.862 5.862 11 Si 0.928 3.072 12 H -0.274 1.274 13 H -0.283 1.283 14 H -0.269 1.269 15 C 0.473 3.527 16 O -0.580 6.580 17 C 0.063 3.937 18 O -0.292 6.292 19 C 0.144 3.856 20 C -0.216 4.216 21 C -0.077 4.077 22 C -0.163 4.163 23 C -0.042 4.042 24 C -0.057 4.057 25 C -0.143 4.143 26 C -0.143 4.143 27 C -0.154 4.154 28 H 0.055 0.945 29 H 0.086 0.914 30 H 0.050 0.950 31 H 0.125 0.875 32 H 0.085 0.915 33 H 0.275 0.725 34 H 0.082 0.918 35 H 0.088 0.912 36 H 0.131 0.869 37 H 0.121 0.879 38 H 0.118 0.882 39 H 0.078 0.922 40 H 0.056 0.944 41 H 0.056 0.944 42 H 0.057 0.943 43 H 0.057 0.943 44 H 0.056 0.944 45 H 0.057 0.943 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.357 9.060 6.600 12.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 O -0.293 6.293 3 C 0.325 3.675 4 O -0.383 6.383 5 C 0.034 3.966 6 N -0.145 5.145 7 C -0.474 4.474 8 H 0.121 0.879 9 C -0.164 4.164 10 N -0.500 5.500 11 Si 0.754 3.246 12 H -0.200 1.200 13 H -0.209 1.209 14 H -0.193 1.193 15 C 0.261 3.739 16 O -0.464 6.464 17 C -0.015 4.015 18 O -0.204 6.204 19 C 0.097 3.903 20 C -0.235 4.235 21 C -0.096 4.096 22 C -0.181 4.181 23 C -0.042 4.042 24 C -0.075 4.075 25 C -0.200 4.200 26 C -0.200 4.200 27 C -0.173 4.173 28 H 0.074 0.926 29 H 0.105 0.895 30 H 0.069 0.931 31 H 0.143 0.857 32 H 0.103 0.897 33 H 0.086 0.914 34 H 0.100 0.900 35 H 0.106 0.894 36 H 0.148 0.852 37 H 0.139 0.861 38 H 0.136 0.864 39 H 0.097 0.903 40 H 0.076 0.924 41 H 0.075 0.925 42 H 0.076 0.924 43 H 0.076 0.924 44 H 0.075 0.925 45 H 0.076 0.924 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 3.810 8.825 7.100 11.950 hybrid contribution -0.022 0.321 -1.515 1.549 sum 3.788 9.147 5.585 11.366 Atomic orbital electron populations 1.22944 0.78598 1.01861 1.01691 1.86450 1.21764 1.35358 1.85681 1.23905 0.92242 0.80637 0.70702 1.90521 1.66472 1.36390 1.44933 1.20476 0.87377 0.84953 1.03840 1.43263 1.57410 1.08198 1.05658 1.19622 1.35080 1.10369 0.82312 0.87869 1.25238 0.94590 0.96894 0.99721 1.69853 1.21822 1.30027 1.28251 0.85917 0.79069 0.79219 0.80424 1.19967 1.20873 1.19312 1.19534 0.83004 0.87016 0.84356 1.90587 1.54309 1.69740 1.31802 1.22385 1.02375 0.95101 0.81597 1.86144 1.82086 1.22580 1.29558 1.19129 0.93321 0.83788 0.94027 1.21374 1.07632 0.95759 0.98716 1.20883 0.97339 0.94301 0.97031 1.20754 1.05377 0.99832 0.92161 1.19560 0.96981 0.92590 0.95087 1.20126 0.96280 0.97811 0.93312 1.21843 0.95655 1.01310 1.01178 1.21848 0.99213 0.97404 1.01567 1.20303 1.06665 0.95098 0.95190 0.92586 0.89542 0.93102 0.85703 0.89736 0.91442 0.90021 0.89395 0.85160 0.86056 0.86431 0.90328 0.92450 0.92511 0.92429 0.92412 0.92505 0.92441 0.85382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.76 10.56 101.05 1.07 1.83 16 2 O -0.37 -8.07 10.57 -39.26 -0.41 -8.49 16 3 C 0.48 11.99 6.13 36.00 0.22 12.21 16 4 O -0.50 -13.90 15.76 -18.75 -0.30 -14.19 16 5 C 0.16 3.76 5.14 -5.20 -0.03 3.74 16 6 N -0.42 -10.50 2.18 -116.10 -0.25 -10.75 16 7 C -0.35 -8.34 9.14 -14.93 -0.14 -8.47 16 8 H 0.10 2.27 6.56 -52.48 -0.34 1.93 16 9 C 0.04 0.99 4.88 -17.47 -0.09 0.91 16 10 N -0.86 -21.62 9.27 55.50 0.51 -21.11 16 11 Si 0.93 18.39 29.60 -169.99 -5.03 13.36 16 12 H -0.27 -5.36 7.11 56.52 0.40 -4.95 16 13 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 14 H -0.27 -5.19 7.11 56.52 0.40 -4.79 16 15 C 0.47 11.70 7.49 -10.98 -0.08 11.62 16 16 O -0.58 -15.91 16.18 -14.36 -0.23 -16.14 16 17 C 0.06 1.31 3.67 36.01 0.13 1.44 16 18 O -0.29 -6.07 9.67 -39.32 -0.38 -6.45 16 19 C 0.14 2.50 6.69 -39.22 -0.26 2.24 16 20 C -0.22 -3.30 9.04 -39.43 -0.36 -3.66 16 21 C -0.08 -1.00 10.04 -39.60 -0.40 -1.39 16 22 C -0.16 -1.96 8.71 -39.57 -0.34 -2.31 16 23 C -0.04 -0.53 4.78 -104.65 -0.50 -1.03 16 24 C -0.06 -0.57 3.09 -91.77 -0.28 -0.85 16 25 C -0.14 -1.22 9.01 37.16 0.33 -0.88 16 26 C -0.14 -1.25 9.01 37.16 0.33 -0.91 16 27 C -0.15 -2.36 9.61 -39.43 -0.38 -2.74 16 28 H 0.06 1.01 8.13 -51.93 -0.42 0.59 16 29 H 0.09 1.14 8.14 -51.93 -0.42 0.72 16 30 H 0.05 0.88 8.13 -51.93 -0.42 0.45 16 31 H 0.13 2.88 6.38 -51.93 -0.33 2.55 16 32 H 0.08 1.87 7.61 -51.93 -0.40 1.48 16 33 H 0.27 6.57 8.31 -40.82 -0.34 6.23 16 34 H 0.08 1.49 7.21 -51.93 -0.37 1.11 16 35 H 0.09 1.77 7.62 -51.93 -0.40 1.38 16 36 H 0.13 1.91 6.30 -52.49 -0.33 1.58 16 37 H 0.12 1.26 8.06 -52.49 -0.42 0.84 16 38 H 0.12 1.15 7.09 -52.48 -0.37 0.77 16 39 H 0.08 0.77 7.87 -51.93 -0.41 0.36 16 40 H 0.06 0.46 7.39 -51.93 -0.38 0.08 16 41 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 42 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 43 H 0.06 0.55 8.14 -51.93 -0.42 0.12 16 44 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 45 H 0.06 0.47 7.38 -51.93 -0.38 0.09 16 46 H 0.13 1.90 7.94 -52.49 -0.42 1.48 16 LS Contribution 384.22 15.07 5.79 5.79 Total: -1.00 -31.79 384.22 -7.72 -39.51 By element: Atomic # 1 Polarization: 13.40 SS G_CDS: -6.65 Total: 6.74 kcal Atomic # 6 Polarization: 12.49 SS G_CDS: -0.77 Total: 11.73 kcal Atomic # 7 Polarization: -32.12 SS G_CDS: 0.26 Total: -31.86 kcal Atomic # 8 Polarization: -43.95 SS G_CDS: -1.32 Total: -45.28 kcal Atomic # 14 Polarization: 18.39 SS G_CDS: -5.03 Total: 13.36 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -31.79 -7.72 -39.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000120582494.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.074 kcal (2) G-P(sol) polarization free energy of solvation -31.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.722 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds