Wall clock time and date at job start Tue Mar 31 2020 18:18:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.49041 * 111.00110 * 2 1 4 4 C 1.54941 * 106.85279 * 214.61955 * 3 2 1 5 5 C 1.53043 * 104.03301 * 357.71386 * 4 3 2 6 6 H 1.08996 * 110.52287 * 269.98272 * 5 4 3 7 7 C 1.51669 * 115.54047 * 142.79329 * 5 4 3 8 8 N 1.47747 * 106.55249 * 188.13626 * 7 5 4 9 9 C 1.34776 * 119.69485 * 231.68120 * 8 7 5 10 10 O 1.21586 * 119.99834 * 4.80256 * 9 8 7 11 11 N 1.34777 * 119.99994 * 184.80932 * 9 8 7 12 12 C 1.46498 * 119.99679 * 185.05758 * 11 9 8 13 13 H 1.08996 * 109.47824 * 325.00233 * 12 11 9 14 14 C 1.50701 * 109.47086 * 204.99815 * 12 11 9 15 15 H 1.08002 * 120.00194 * 354.19668 * 14 12 11 16 16 C 1.37879 * 119.99987 * 174.19691 * 14 12 11 17 17 N 1.31514 * 119.99937 * 332.98444 * 16 14 12 18 18 Si 1.86804 * 120.00099 * 152.98883 * 16 14 12 19 19 H 1.48495 * 109.47048 * 179.97438 * 18 16 14 20 20 H 1.48497 * 109.46795 * 299.99627 * 18 16 14 21 21 H 1.48503 * 109.47233 * 59.99448 * 18 16 14 22 22 C 1.53008 * 109.46923 * 85.00385 * 12 11 9 23 23 F 1.39896 * 109.46947 * 176.84046 * 22 12 11 24 24 F 1.39903 * 109.46806 * 296.83824 * 22 12 11 25 25 F 1.39895 * 109.46960 * 56.84118 * 22 12 11 26 26 C 1.46598 * 120.61238 * 51.40336 * 8 7 5 27 27 C 1.53934 * 110.64469 * 312.57405 * 26 8 7 28 28 C 1.46717 * 110.99945 * 244.43592 * 2 1 3 29 29 H 1.09000 * 109.91747 * 45.44601 * 28 2 1 30 30 H 1.09003 * 109.47044 * 175.56475 * 1 2 3 31 31 H 1.08991 * 109.47175 * 295.56368 * 1 2 3 32 32 H 1.08998 * 109.46754 * 55.57012 * 1 2 3 33 33 H 1.09000 * 109.97785 * 333.96686 * 3 2 1 34 34 H 1.08996 * 109.98310 * 95.22616 * 3 2 1 35 35 H 1.09001 * 110.51636 * 116.35093 * 4 3 2 36 36 H 1.08999 * 110.51675 * 239.07657 * 4 3 2 37 37 H 1.08993 * 110.01275 * 68.83833 * 7 5 4 38 38 H 1.08997 * 109.91937 * 307.38633 * 7 5 4 39 39 H 0.96996 * 120.00146 * 5.06230 * 11 9 8 40 40 H 0.96997 * 120.00310 * 354.50971 * 17 16 14 41 41 H 1.08997 * 109.23999 * 72.87310 * 26 8 7 42 42 H 1.08994 * 109.24191 * 192.26929 * 26 8 7 43 43 H 1.09001 * 109.89129 * 170.75707 * 27 26 8 44 44 H 1.08998 * 109.89352 * 291.86460 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0032 1.3914 0.0000 4 6 3.3034 1.3734 -0.8425 5 6 3.4678 -0.0953 -1.2398 6 1 4.0550 -0.6298 -0.4931 7 6 4.0091 -0.3385 -2.6357 8 7 3.9002 -1.7912 -2.8822 9 6 4.9786 -2.4789 -3.3070 10 8 6.0556 -1.9228 -3.4020 11 7 4.8631 -3.7831 -3.6267 12 6 6.0543 -4.5585 -3.9816 13 1 6.7541 -3.9222 -4.5232 14 6 5.6553 -5.7217 -4.8528 15 1 4.6108 -5.9236 -5.0390 16 6 6.6238 -6.5281 -5.4122 17 7 7.8222 -6.0443 -5.6556 18 14 6.2336 -8.3078 -5.8243 19 1 7.4344 -8.9546 -6.4116 20 1 5.8386 -9.0273 -4.5868 21 1 5.1174 -8.3562 -6.8026 22 6 6.7212 -5.0809 -2.7074 23 9 7.8169 -5.8808 -3.0489 24 9 7.1560 -4.0006 -1.9322 25 9 5.8003 -5.8389 -1.9763 26 6 2.6316 -2.4925 -2.6633 27 6 2.0258 -2.1062 -1.3019 28 6 1.9948 -0.5911 -1.2356 29 1 1.4566 -0.1931 -2.0959 30 1 -0.3633 -1.0246 -0.0795 31 1 -0.3633 0.4434 0.9270 32 1 -0.3633 0.5810 -0.8476 33 1 1.2773 2.0690 -0.4496 34 1 2.2238 1.7057 1.0201 35 1 3.1933 1.9989 -1.7284 36 1 4.1516 1.7043 -0.2431 37 1 5.0520 -0.0268 -2.6908 38 1 3.4142 0.2106 -3.3655 39 1 3.9913 -4.2083 -3.6217 40 1 8.0021 -5.1013 -5.5165 41 1 1.9326 -2.2263 -3.4561 42 1 2.8071 -3.5680 -2.6862 43 1 1.0133 -2.5017 -1.2209 44 1 2.6444 -2.5001 -0.4955 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000932893749.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:18:42 Heat of formation + Delta-G solvation = -165.429054 kcal Electronic energy + Delta-G solvation = -31306.282124 eV Core-core repulsion = 26650.798108 eV Total energy + Delta-G solvation = -4655.484016 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 335.156 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.73315 -46.28769 -46.18537 -40.70440 -39.10792 -35.99134 -34.90576 -33.22631 -32.51129 -31.44553 -29.29804 -27.84064 -26.06544 -24.44216 -24.09632 -23.08584 -21.69477 -20.80426 -20.44928 -19.48239 -18.34925 -17.36448 -17.16236 -16.98563 -16.33115 -15.84806 -15.63283 -15.32108 -15.21649 -14.65026 -14.38628 -13.98824 -13.75289 -13.69071 -13.39799 -13.21021 -13.10537 -12.81092 -12.72161 -12.70969 -12.53488 -12.49208 -12.41701 -12.37723 -12.35120 -11.60432 -11.45282 -11.41485 -11.31633 -11.16609 -10.99459 -10.81035 -10.74402 -10.28307 -10.20110 -9.61607 -9.51887 -8.75308 -8.63170 -8.42383 -8.24657 -6.77426 -4.48699 2.90746 3.31508 3.38818 3.53482 3.56197 3.71080 4.13939 4.23238 4.31305 4.36841 4.48589 4.65231 4.84776 4.89640 4.93163 4.98535 5.08674 5.14601 5.21942 5.26719 5.31264 5.42925 5.47571 5.53090 5.57459 5.59550 5.64402 5.66982 5.71299 5.74816 5.83097 5.92737 6.05337 6.18072 6.55653 6.58064 6.71103 6.79270 7.06005 7.18663 7.49925 8.11108 8.39441 8.49470 9.05277 9.20373 10.57598 Molecular weight = 335.16amu Principal moments of inertia in cm(-1) A = 0.022274 B = 0.003311 C = 0.003188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1256.786094 B = 8455.438829 C = 8781.051133 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 N -0.512 5.512 3 C 0.036 3.964 4 C -0.122 4.122 5 C -0.106 4.106 6 H 0.091 0.909 7 C 0.144 3.856 8 N -0.634 5.634 9 C 0.702 3.298 10 O -0.584 6.584 11 N -0.720 5.720 12 C 0.252 3.748 13 H 0.080 0.920 14 C -0.648 4.648 15 H 0.072 0.928 16 C 0.052 3.948 17 N -0.847 5.847 18 Si 1.060 2.940 19 H -0.279 1.279 20 H -0.281 1.281 21 H -0.284 1.284 22 C 0.413 3.587 23 F -0.176 7.176 24 F -0.206 7.206 25 F -0.198 7.198 26 C 0.114 3.886 27 C -0.115 4.115 28 C 0.061 3.939 29 H 0.051 0.949 30 H 0.069 0.931 31 H 0.067 0.933 32 H 0.027 0.973 33 H 0.046 0.954 34 H 0.080 0.920 35 H 0.070 0.930 36 H 0.077 0.923 37 H 0.099 0.901 38 H 0.062 0.938 39 H 0.396 0.604 40 H 0.278 0.722 41 H 0.063 0.937 42 H 0.084 0.916 43 H 0.074 0.926 44 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.305 11.267 8.106 19.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 N -0.236 5.236 3 C -0.092 4.092 4 C -0.160 4.160 5 C -0.126 4.126 6 H 0.109 0.891 7 C 0.021 3.979 8 N -0.372 5.372 9 C 0.403 3.597 10 O -0.461 6.461 11 N -0.374 5.374 12 C 0.145 3.855 13 H 0.097 0.903 14 C -0.683 4.683 15 H 0.090 0.910 16 C -0.162 4.162 17 N -0.475 5.475 18 Si 0.886 3.114 19 H -0.204 1.204 20 H -0.207 1.207 21 H -0.210 1.210 22 C 0.357 3.643 23 F -0.157 7.157 24 F -0.188 7.188 25 F -0.180 7.180 26 C -0.010 4.010 27 C -0.153 4.153 28 C -0.048 4.048 29 H 0.069 0.931 30 H 0.088 0.912 31 H 0.086 0.914 32 H 0.045 0.955 33 H 0.064 0.936 34 H 0.098 0.902 35 H 0.089 0.911 36 H 0.095 0.905 37 H 0.117 0.883 38 H 0.080 0.920 39 H 0.233 0.767 40 H 0.089 0.911 41 H 0.081 0.919 42 H 0.102 0.898 43 H 0.093 0.907 44 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -12.637 9.976 7.961 17.960 hybrid contribution -1.465 1.539 0.307 2.147 sum -14.102 11.514 8.267 19.995 Atomic orbital electron populations 1.22531 0.88025 1.02056 1.00775 1.64673 1.07982 1.15040 1.35888 1.23250 0.95791 0.89414 1.00732 1.22204 0.97730 0.96242 0.99851 1.22194 0.96050 0.96184 0.98210 0.89093 1.21206 1.03246 0.79523 0.93942 1.47363 1.09969 1.08360 1.71558 1.16033 0.83689 0.81934 0.78039 1.90891 1.25839 1.68877 1.60533 1.45283 1.11368 1.08250 1.72546 1.19557 0.85432 0.92950 0.87566 0.90288 1.21565 0.96478 1.14249 1.36046 0.90967 1.25918 0.92661 1.05326 0.92302 1.70741 1.23319 1.17016 1.36438 0.83701 0.76129 0.74671 0.76892 1.20374 1.20664 1.20992 1.23096 0.77421 0.75435 0.88328 1.93151 1.55669 1.74831 1.92096 1.93096 1.90675 1.56272 1.78754 1.93009 1.67051 1.77725 1.80229 1.21581 0.85629 0.97326 0.96510 1.21691 1.01466 0.94382 0.97799 1.22424 0.95350 0.95805 0.91243 0.93141 0.91198 0.91372 0.95478 0.93554 0.90198 0.91102 0.90453 0.88320 0.91982 0.76737 0.91089 0.91909 0.89801 0.90705 0.90314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.12 9.41 60.07 0.57 0.68 16 2 N -0.51 -5.04 5.48 -231.16 -1.27 -6.31 16 3 C 0.04 0.30 6.74 -1.61 -0.01 0.29 16 4 C -0.12 -1.08 6.60 -25.68 -0.17 -1.25 16 5 C -0.11 -1.20 2.75 -89.99 -0.25 -1.45 16 6 H 0.09 1.23 8.05 -51.93 -0.42 0.81 16 7 C 0.14 1.90 5.95 -4.03 -0.02 1.87 16 8 N -0.63 -9.74 3.01 -178.55 -0.54 -10.27 16 9 C 0.70 14.26 7.79 -86.92 -0.68 13.58 16 10 O -0.58 -14.02 14.51 5.29 0.08 -13.94 16 11 N -0.72 -14.99 4.76 -59.81 -0.28 -15.28 16 12 C 0.25 6.26 2.01 -69.08 -0.14 6.12 16 13 H 0.08 2.19 6.40 -51.93 -0.33 1.85 16 14 C -0.65 -16.68 8.33 -34.44 -0.29 -16.97 16 15 H 0.07 1.79 7.85 -52.49 -0.41 1.37 16 16 C 0.05 1.37 4.26 -17.82 -0.08 1.30 16 17 N -0.85 -23.91 12.30 55.43 0.68 -23.23 16 18 Si 1.06 23.43 29.98 -169.99 -5.10 18.34 16 19 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 20 H -0.28 -6.06 7.11 56.52 0.40 -5.65 16 21 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 22 C 0.41 10.41 2.82 37.16 0.10 10.51 16 23 F -0.18 -4.73 14.65 2.25 0.03 -4.70 16 24 F -0.21 -5.18 15.98 2.25 0.04 -5.14 16 25 F -0.20 -4.75 16.97 2.25 0.04 -4.71 16 26 C 0.11 1.37 6.20 -3.50 -0.02 1.35 16 27 C -0.11 -1.21 5.99 -26.91 -0.16 -1.37 16 28 C 0.06 0.62 1.63 -67.19 -0.11 0.51 16 29 H 0.05 0.51 7.92 -51.93 -0.41 0.10 16 30 H 0.07 0.53 7.82 -51.93 -0.41 0.12 16 31 H 0.07 0.48 8.14 -51.93 -0.42 0.06 16 32 H 0.03 0.20 7.95 -51.93 -0.41 -0.21 16 33 H 0.05 0.35 7.69 -51.93 -0.40 -0.05 16 34 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 35 H 0.07 0.56 8.03 -51.93 -0.42 0.14 16 36 H 0.08 0.66 8.14 -51.93 -0.42 0.23 16 37 H 0.10 1.49 6.98 -51.93 -0.36 1.13 16 38 H 0.06 0.71 8.12 -51.93 -0.42 0.29 16 39 H 0.40 7.21 6.10 -40.82 -0.25 6.97 16 40 H 0.28 7.99 7.21 -40.82 -0.29 7.69 16 41 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 42 H 0.08 1.04 5.76 -51.93 -0.30 0.74 16 43 H 0.07 0.66 7.84 -51.93 -0.41 0.25 16 44 H 0.08 0.97 8.06 -51.93 -0.42 0.55 16 LS Contribution 353.78 15.07 5.33 5.33 Total: -1.00 -30.80 353.78 -8.39 -39.19 By element: Atomic # 1 Polarization: 11.71 SS G_CDS: -6.15 Total: 5.56 kcal Atomic # 6 Polarization: 16.42 SS G_CDS: -1.25 Total: 15.17 kcal Atomic # 7 Polarization: -53.68 SS G_CDS: -1.41 Total: -55.09 kcal Atomic # 8 Polarization: -14.02 SS G_CDS: 0.08 Total: -13.94 kcal Atomic # 9 Polarization: -14.66 SS G_CDS: 0.11 Total: -14.56 kcal Atomic # 14 Polarization: 23.43 SS G_CDS: -5.10 Total: 18.34 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -30.80 -8.39 -39.19 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000932893749.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.237 kcal (2) G-P(sol) polarization free energy of solvation -30.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds