Wall clock time and date at job start Tue Mar 31 2020 20:44:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35681 * 116.99941 * 2 1 4 4 C 1.38474 * 120.10503 * 359.73020 * 3 2 1 5 5 C 1.38728 * 120.03953 * 179.72354 * 4 3 2 6 6 N 1.39993 * 119.87396 * 180.25771 * 5 4 3 7 7 C 1.35132 * 127.38958 * 5.91002 * 6 5 4 8 8 N 1.30722 * 107.25985 * 179.97438 * 7 6 5 9 9 N 1.28413 * 110.65803 * 0.02562 * 8 7 6 10 10 N 1.28946 * 110.21745 * 359.72652 * 9 8 7 11 11 C 1.39312 * 120.25516 * 0.55111 * 5 4 3 12 12 Cl 1.73603 * 119.89068 * 179.74836 * 11 5 4 13 13 C 1.37660 * 120.21606 * 359.72539 * 11 5 4 14 14 C 1.39891 * 119.95414 * 359.97438 * 13 11 5 15 15 C 1.47286 * 120.12660 * 179.97438 * 14 13 11 16 16 O 1.21643 * 120.00120 * 138.21242 * 15 14 13 17 17 N 1.34778 * 119.99981 * 318.20919 * 15 14 13 18 18 C 1.46497 * 120.00022 * 7.79817 * 17 15 14 19 19 C 1.36906 * 120.00032 * 187.79086 * 17 15 14 20 20 H 1.08004 * 119.99963 * 318.54609 * 19 17 15 21 21 C 1.39020 * 120.00101 * 138.54604 * 19 17 15 22 22 N 1.31390 * 119.99540 * 39.85752 * 21 19 17 23 23 Si 1.86797 * 120.00292 * 219.85849 * 21 19 17 24 24 H 1.48501 * 109.46980 * 89.99672 * 23 21 19 25 25 H 1.48495 * 109.47062 * 210.00067 * 23 21 19 26 26 H 1.48507 * 109.46966 * 330.00003 * 23 21 19 27 27 H 1.09007 * 109.47106 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47672 * 59.99495 * 1 2 3 29 29 H 1.09008 * 109.46764 * 299.99151 * 1 2 3 30 30 H 1.07992 * 119.98125 * 359.97438 * 4 3 2 31 31 H 1.07992 * 126.36523 * 359.97438 * 7 6 5 32 32 H 1.07997 * 120.02558 * 180.02562 * 13 11 5 33 33 H 1.08997 * 109.47827 * 100.16179 * 18 17 15 34 34 H 1.09005 * 109.47032 * 220.15795 * 18 17 15 35 35 H 1.08997 * 109.47420 * 340.15406 * 18 17 15 36 36 H 0.97000 * 119.99497 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2089 0.0000 4 6 1.2929 2.3716 -0.0056 5 6 1.9241 3.6070 0.0002 6 7 1.1604 4.7803 -0.0001 7 6 -0.1828 4.8851 0.1050 8 7 -0.4771 6.1580 0.0612 9 7 0.5874 6.8650 -0.0649 10 7 1.6266 6.1027 -0.1044 11 6 3.3151 3.6846 0.0001 12 17 4.0951 5.2355 0.0008 13 6 4.0730 2.5354 0.0000 14 6 3.4458 1.2850 0.0005 15 6 4.2531 0.0531 -0.0002 16 8 3.9300 -0.8862 0.7020 17 7 5.3497 -0.0336 -0.7790 18 6 5.8367 1.1495 -1.4926 19 6 6.0086 -1.2272 -0.9031 20 1 6.1607 -1.8528 -0.0359 21 6 6.4819 -1.6341 -2.1453 22 7 7.0255 -0.7584 -2.9601 23 14 6.3450 -3.4257 -2.6559 24 1 5.0525 -3.6442 -3.3537 25 1 7.4647 -3.7670 -3.5696 26 1 6.4088 -4.2904 -1.4502 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 0.5137 0.8901 30 1 0.2144 2.3167 -0.0105 31 1 -0.8827 4.0690 0.2063 32 1 5.1511 2.5991 0.0003 33 1 6.6746 1.5836 -0.9472 34 1 6.1636 0.8621 -2.4920 35 1 5.0343 1.8832 -1.5698 36 1 7.3560 -1.0424 -3.8267 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000337555133.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:44:26 Heat of formation + Delta-G solvation = 116.376901 kcal Electronic energy + Delta-G solvation = -26660.971650 eV Core-core repulsion = 22597.755550 eV Total energy + Delta-G solvation = -4063.216099 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 337.073 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -43.37875 -40.67169 -38.44684 -38.02072 -36.31421 -34.99690 -34.81944 -32.50447 -32.13845 -30.63761 -30.14679 -27.59362 -26.55995 -25.86827 -24.38980 -23.84890 -22.58611 -21.70160 -20.03395 -19.19702 -17.37366 -17.05709 -16.84142 -16.79029 -16.26124 -16.18863 -15.85607 -15.29525 -14.54064 -14.49190 -14.25994 -13.91515 -13.76514 -13.70055 -13.46491 -12.65267 -12.59248 -12.51000 -12.04782 -12.01294 -11.91099 -11.66184 -11.57410 -11.50209 -11.31822 -10.88874 -10.69707 -10.56581 -10.52766 -10.43089 -10.30086 -9.04864 -8.79027 -8.64462 -8.21210 -7.82795 -6.73761 -4.03162 -0.01493 0.96198 1.31746 1.47647 2.03246 2.06191 3.01625 3.12758 3.14547 3.20938 3.26519 3.72988 3.85630 3.95315 4.05311 4.34084 4.42182 4.60220 4.72860 4.76960 4.97169 4.99423 5.05854 5.14968 5.22332 5.27589 5.36211 5.59812 5.82255 5.90413 6.04974 6.15775 6.31527 6.54017 7.06189 7.20014 7.50580 8.10067 8.19373 8.33660 8.95921 9.13762 9.79823 10.25360 Molecular weight = 337.07amu Principal moments of inertia in cm(-1) A = 0.017037 B = 0.003715 C = 0.003229 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1643.113753 B = 7536.101712 C = 8669.888972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.272 6.272 3 C 0.193 3.807 4 C -0.213 4.213 5 C 0.167 3.833 6 N -0.321 5.321 7 C 0.222 3.778 8 N -0.331 5.331 9 N -0.047 5.047 10 N -0.051 5.051 11 C -0.067 4.067 12 Cl -0.029 7.029 13 C -0.041 4.041 14 C -0.100 4.100 15 C 0.486 3.514 16 O -0.562 6.562 17 N -0.428 5.428 18 C 0.036 3.964 19 C -0.332 4.332 20 H 0.101 0.899 21 C 0.068 3.932 22 N -0.827 5.827 23 Si 0.900 3.100 24 H -0.273 1.273 25 H -0.285 1.285 26 H -0.263 1.263 27 H 0.106 0.894 28 H 0.056 0.944 29 H 0.057 0.943 30 H 0.147 0.853 31 H 0.236 0.764 32 H 0.165 0.835 33 H 0.041 0.959 34 H 0.125 0.875 35 H 0.044 0.956 36 H 0.275 0.725 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.363 7.048 2.126 13.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.143 3.857 4 C -0.235 4.235 5 C 0.072 3.928 6 N -0.111 5.111 7 C -0.075 4.075 8 N -0.179 5.179 9 N -0.042 5.042 10 N -0.036 5.036 11 C -0.097 4.097 12 Cl 0.000 7.000 13 C -0.061 4.061 14 C -0.106 4.106 15 C 0.275 3.725 16 O -0.445 6.445 17 N -0.146 5.146 18 C -0.106 4.106 19 C -0.458 4.458 20 H 0.119 0.881 21 C -0.141 4.141 22 N -0.460 5.460 23 Si 0.724 3.276 24 H -0.199 1.199 25 H -0.211 1.211 26 H -0.188 1.188 27 H 0.124 0.876 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.165 0.835 31 H 0.252 0.748 32 H 0.182 0.818 33 H 0.059 0.941 34 H 0.142 0.858 35 H 0.062 0.938 36 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -10.951 7.978 2.160 13.720 hybrid contribution -0.267 -1.370 -0.380 1.446 sum -11.218 6.608 1.780 13.141 Atomic orbital electron populations 1.23223 0.78639 1.04836 1.00984 1.86426 1.20809 1.24460 1.86564 1.18555 0.90750 0.84045 0.92312 1.20586 1.00519 0.89236 1.13172 1.16897 0.88496 0.81989 1.05423 1.48991 1.06380 1.07021 1.48710 1.27398 0.84567 0.98252 0.97309 1.74448 1.21835 1.00399 1.21262 1.78091 0.92686 1.23291 1.10083 1.83123 1.17894 0.82687 1.19898 1.20356 0.89836 0.89263 1.10229 1.98412 1.79998 1.24929 1.96679 1.21401 1.01508 0.88239 0.94981 1.19948 0.91233 0.95387 1.04016 1.17482 0.82039 0.86271 0.86706 1.90673 1.71261 1.39082 1.43513 1.43388 1.21039 1.09576 1.40593 1.23058 0.96816 0.87911 1.02864 1.19259 1.36341 0.95404 0.94795 0.88142 1.25581 0.93394 0.99935 0.95226 1.69881 1.29283 1.36304 1.10574 0.86384 0.78224 0.83913 0.79036 1.19871 1.21098 1.18755 0.87567 0.92557 0.92471 0.83505 0.74760 0.81796 0.94055 0.85786 0.93763 0.91405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.17 9.81 101.05 0.99 1.16 16 2 O -0.27 -4.33 9.31 -33.77 -0.31 -4.64 16 3 C 0.19 2.99 6.66 -38.72 -0.26 2.73 16 4 C -0.21 -2.46 8.46 -39.31 -0.33 -2.79 16 5 C 0.17 2.15 6.69 -83.55 -0.56 1.59 16 6 N -0.32 -3.99 3.84 -11.70 -0.04 -4.04 16 7 C 0.22 2.15 12.14 -90.11 -1.09 1.06 16 8 N -0.33 -4.19 12.15 29.65 0.36 -3.83 16 9 N -0.05 -0.68 13.39 60.35 0.81 0.13 16 10 N -0.05 -0.74 10.81 60.35 0.65 -0.09 16 11 C -0.07 -0.97 6.33 -39.39 -0.25 -1.22 16 12 Cl -0.03 -0.41 25.97 -51.86 -1.35 -1.76 16 13 C -0.04 -0.65 7.09 -39.17 -0.28 -0.92 16 14 C -0.10 -1.83 5.29 -104.83 -0.56 -2.38 16 15 C 0.49 11.33 7.05 -12.58 -0.09 11.24 16 16 O -0.56 -14.93 16.10 -9.79 -0.16 -15.09 16 17 N -0.43 -10.31 2.99 -123.47 -0.37 -10.68 16 18 C 0.04 0.75 8.57 59.85 0.51 1.26 16 19 C -0.33 -8.72 8.77 -15.00 -0.13 -8.85 16 20 H 0.10 2.78 7.92 -52.48 -0.42 2.36 16 21 C 0.07 1.68 5.36 -17.45 -0.09 1.59 16 22 N -0.83 -20.07 10.63 55.50 0.59 -19.48 16 23 Si 0.90 19.41 29.69 -169.99 -5.05 14.36 16 24 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 25 H -0.28 -5.95 7.11 56.52 0.40 -5.55 16 26 H -0.26 -5.75 7.11 56.52 0.40 -5.35 16 27 H 0.11 0.84 8.14 -51.92 -0.42 0.42 16 28 H 0.06 0.39 7.65 -51.93 -0.40 0.00 16 29 H 0.06 0.39 7.67 -51.92 -0.40 -0.01 16 30 H 0.15 1.05 5.11 -52.49 -0.27 0.78 16 31 H 0.24 0.94 7.20 -52.49 -0.38 0.57 16 32 H 0.16 2.52 5.85 -52.49 -0.31 2.21 16 33 H 0.04 0.81 7.86 -51.93 -0.41 0.40 16 34 H 0.12 2.81 5.05 -51.93 -0.26 2.55 16 35 H 0.04 0.79 4.51 -51.93 -0.23 0.56 16 36 H 0.28 6.23 8.31 -40.82 -0.34 5.89 16 LS Contribution 323.72 15.07 4.88 4.88 Total: -1.00 -31.75 323.72 -4.75 -36.50 By element: Atomic # 1 Polarization: 1.90 SS G_CDS: -2.63 Total: -0.73 kcal Atomic # 6 Polarization: 6.60 SS G_CDS: -2.14 Total: 4.47 kcal Atomic # 7 Polarization: -39.99 SS G_CDS: 2.00 Total: -37.99 kcal Atomic # 8 Polarization: -19.26 SS G_CDS: -0.47 Total: -19.73 kcal Atomic # 14 Polarization: 19.41 SS G_CDS: -5.05 Total: 14.36 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.35 Total: -1.76 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -31.75 -4.75 -36.50 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000337555133.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 152.879 kcal (2) G-P(sol) polarization free energy of solvation -31.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.753 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.502 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds