Wall clock time and date at job start Tue Mar 31 2020 19:57:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 O 1.21273 * 120.00202 * 2 1 4 4 N 1.34777 * 119.99927 * 179.72608 * 2 1 3 5 5 C 1.38891 * 120.00329 * 180.27083 * 4 2 1 6 6 N 1.29515 * 125.27203 * 179.71995 * 5 4 2 7 7 C 1.33645 * 115.66874 * 179.79074 * 6 5 4 8 8 C 1.47195 * 122.49970 * 180.23778 * 7 6 5 9 9 O 1.21648 * 119.99608 * 180.28075 * 8 7 6 10 10 N 1.34777 * 120.00628 * 0.28696 * 8 7 6 11 11 C 1.46496 * 120.00402 * 179.97438 * 10 8 7 12 12 H 1.08997 * 109.47192 * 325.00336 * 11 10 8 13 13 C 1.50702 * 109.47147 * 204.99949 * 11 10 8 14 14 H 1.07992 * 120.00328 * 274.94291 * 13 11 10 15 15 C 1.37883 * 119.99623 * 94.94453 * 13 11 10 16 16 N 1.31513 * 119.99841 * 184.87650 * 15 13 11 17 17 Si 1.86800 * 119.99908 * 4.87933 * 15 13 11 18 18 H 1.48499 * 109.47277 * 84.81050 * 17 15 13 19 19 H 1.48504 * 109.46719 * 204.80499 * 17 15 13 20 20 H 1.48498 * 109.47325 * 324.80904 * 17 15 13 21 21 C 1.52999 * 109.47011 * 85.00236 * 11 10 8 22 22 F 1.39903 * 109.46898 * 54.93575 * 21 11 10 23 23 F 1.39899 * 109.47271 * 174.93871 * 21 11 10 24 24 F 1.39902 * 109.47144 * 294.93809 * 21 11 10 25 25 C 1.34886 * 114.99181 * 0.50859 * 7 6 5 26 26 S 1.70980 * 109.20131 * 359.72898 * 25 7 6 27 27 H 1.09003 * 109.46978 * 359.97438 * 1 2 3 28 28 H 1.09000 * 109.47644 * 119.99344 * 1 2 3 29 29 H 1.08996 * 109.47315 * 240.00175 * 1 2 3 30 30 H 0.97001 * 120.00035 * 0.27528 * 4 2 1 31 31 H 0.97003 * 119.99303 * 0.02562 * 10 8 7 32 32 H 0.97000 * 119.99986 * 180.02562 * 16 15 13 33 33 H 1.08006 * 125.39965 * 179.71447 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0502 0.0000 4 7 2.1808 -1.1672 0.0056 5 6 3.5697 -1.1673 0.0113 6 7 4.3175 -2.2247 0.0221 7 6 5.6353 -2.0018 0.0214 8 6 6.6221 -3.0940 0.0276 9 8 7.8115 -2.8389 0.0319 10 7 6.2079 -4.3766 0.0285 11 6 7.1901 -5.4635 0.0341 12 1 8.0604 -5.1698 -0.5526 13 6 6.5737 -6.7007 -0.5664 14 1 5.9885 -7.3664 0.0506 15 6 6.7568 -6.9826 -1.9036 16 7 6.1413 -8.0085 -2.4497 17 14 7.8793 -5.9073 -2.9396 18 1 9.2826 -6.3700 -2.7920 19 1 7.4752 -5.9995 -4.3656 20 1 7.7725 -4.4977 -2.4849 21 6 7.6199 -5.7550 1.4732 22 9 6.4889 -6.0195 2.2532 23 9 8.4686 -6.8670 1.4903 24 9 8.2951 -4.6450 1.9922 25 6 5.9933 -0.7014 0.0204 26 16 4.5858 0.2694 0.0127 27 1 -0.3633 1.0277 0.0005 28 1 -0.3634 -0.5137 -0.8900 29 1 -0.3634 -0.5138 0.8900 30 1 1.6958 -2.0072 0.0056 31 1 5.2594 -4.5799 0.0246 32 1 6.2704 -8.2071 -3.3903 33 1 7.0082 -0.3318 0.0242 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928815108.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:57:04 Heat of formation + Delta-G solvation = -181.462186 kcal Electronic energy + Delta-G solvation = -26974.308597 eV Core-core repulsion = 22326.071440 eV Total energy + Delta-G solvation = -4648.237156 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 337.049 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -49.03799 -46.55934 -46.51834 -40.70839 -39.86431 -38.13526 -35.21647 -34.78824 -32.55209 -31.11672 -29.51451 -29.12756 -25.27275 -24.92384 -22.81012 -21.71383 -20.95027 -19.65010 -18.75442 -17.97243 -17.54484 -17.20679 -17.01920 -16.87347 -16.48317 -16.24681 -15.97968 -15.08255 -14.79986 -14.61120 -14.18664 -13.64106 -13.51343 -13.42021 -13.30056 -13.15814 -13.00762 -12.94476 -12.78056 -12.72983 -12.67324 -12.52604 -12.04328 -11.78183 -11.25089 -11.12968 -10.69719 -10.49367 -10.15314 -9.99979 -9.83189 -9.60429 -9.42629 -8.97253 -8.50163 -8.27073 -6.53171 -4.67908 0.56817 0.93538 1.71935 1.72655 2.30989 2.42695 3.11840 3.20464 3.30102 3.64860 3.76798 4.01074 4.10989 4.14972 4.45900 4.73430 4.82794 4.87771 5.16452 5.19394 5.26440 5.31523 5.37057 5.52049 5.66738 5.98546 6.29817 6.51664 6.89543 7.12527 7.37878 7.48919 7.86656 8.34236 8.52336 8.79905 9.02996 10.55251 Molecular weight = 337.05amu Principal moments of inertia in cm(-1) A = 0.014233 B = 0.003779 C = 0.003561 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1966.803214 B = 7407.379014 C = 7860.576873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.511 3.489 3 O -0.513 6.513 4 N -0.621 5.621 5 C 0.246 3.754 6 N -0.468 5.468 7 C 0.038 3.962 8 C 0.575 3.425 9 O -0.538 6.538 10 N -0.691 5.691 11 C 0.201 3.799 12 H 0.091 0.909 13 C -0.535 4.535 14 H 0.094 0.906 15 C 0.101 3.899 16 N -0.859 5.859 17 Si 0.866 3.134 18 H -0.264 1.264 19 H -0.279 1.279 20 H -0.254 1.254 21 C 0.438 3.562 22 F -0.191 7.191 23 F -0.181 7.181 24 F -0.196 7.196 25 C -0.263 4.263 26 S 0.257 5.743 27 H 0.102 0.898 28 H 0.098 0.902 29 H 0.098 0.902 30 H 0.427 0.573 31 H 0.410 0.590 32 H 0.275 0.725 33 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.097 14.579 3.526 18.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.299 3.701 3 O -0.387 6.387 4 N -0.272 5.272 5 C -0.124 4.124 6 N -0.191 5.191 7 C -0.096 4.096 8 C 0.358 3.642 9 O -0.416 6.416 10 N -0.342 5.342 11 C 0.098 3.902 12 H 0.108 0.892 13 C -0.573 4.573 14 H 0.112 0.888 15 C -0.109 4.109 16 N -0.491 5.491 17 Si 0.690 3.310 18 H -0.189 1.189 19 H -0.205 1.205 20 H -0.178 1.178 21 C 0.382 3.618 22 F -0.173 7.173 23 F -0.162 7.162 24 F -0.177 7.177 25 C -0.406 4.406 26 S 0.508 5.492 27 H 0.121 0.879 28 H 0.117 0.883 29 H 0.117 0.883 30 H 0.267 0.733 31 H 0.247 0.753 32 H 0.086 0.914 33 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -10.372 15.904 3.388 19.287 hybrid contribution 0.525 -1.015 -0.368 1.201 sum -9.847 14.889 3.020 18.104 Atomic orbital electron populations 1.21887 0.88641 1.06637 1.05392 1.21323 0.91673 0.82129 0.75016 1.90687 1.69673 1.30705 1.47656 1.42848 1.01627 1.11568 1.71128 1.24311 0.89737 0.93638 1.04677 1.67059 1.03433 1.29207 1.19397 1.20136 0.88626 0.93996 1.06848 1.17497 0.86843 0.82722 0.77120 1.90782 1.15793 1.83954 1.51091 1.47298 1.11909 1.03913 1.71095 1.20074 0.93344 0.89488 0.87280 0.89170 1.20718 1.35641 1.04765 0.96153 0.88753 1.24979 0.94159 0.94472 0.97260 1.69854 1.39094 1.26610 1.13575 0.86963 0.81821 0.82354 0.79817 1.18894 1.20467 1.17809 1.21688 0.74546 0.73595 0.91953 1.93072 1.52129 1.94030 1.78076 1.93107 1.71842 1.54265 1.97015 1.93144 1.81332 1.53899 1.89346 1.26884 1.07498 0.97661 1.08544 1.84699 0.91530 1.05803 1.67199 0.87883 0.88313 0.88336 0.73313 0.75299 0.91449 0.79366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.55 10.32 36.00 0.37 -0.17 16 2 C 0.51 4.19 7.90 -10.99 -0.09 4.10 16 3 O -0.51 -5.98 14.59 5.56 0.08 -5.90 16 4 N -0.62 -5.68 5.40 -11.92 -0.06 -5.74 16 5 C 0.25 3.27 8.36 -87.55 -0.73 2.54 16 6 N -0.47 -7.57 10.11 -10.51 -0.11 -7.68 16 7 C 0.04 0.69 6.66 -84.63 -0.56 0.13 16 8 C 0.58 12.36 7.44 -12.62 -0.09 12.27 16 9 O -0.54 -12.72 15.22 5.24 0.08 -12.64 16 10 N -0.69 -15.17 4.90 -56.08 -0.28 -15.45 16 11 C 0.20 4.82 1.71 -69.08 -0.12 4.71 16 12 H 0.09 2.27 4.73 -51.93 -0.25 2.02 16 13 C -0.54 -13.96 8.52 -34.44 -0.29 -14.25 16 14 H 0.09 2.64 8.00 -52.49 -0.42 2.22 16 15 C 0.10 2.69 5.47 -17.82 -0.10 2.59 16 16 N -0.86 -23.75 13.96 55.43 0.77 -22.97 16 17 Si 0.87 20.49 26.99 -169.99 -4.59 15.90 16 18 H -0.26 -6.17 7.11 56.52 0.40 -5.77 16 19 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 20 H -0.25 -6.16 6.82 56.52 0.39 -5.77 16 21 C 0.44 10.10 2.83 37.16 0.11 10.20 16 22 F -0.19 -4.27 16.93 2.25 0.04 -4.23 16 23 F -0.18 -4.19 16.89 2.25 0.04 -4.15 16 24 F -0.20 -4.47 15.83 2.25 0.04 -4.43 16 25 C -0.26 -4.02 10.55 29.54 0.31 -3.71 16 26 S 0.26 3.27 20.29 -107.50 -2.18 1.09 16 27 H 0.10 0.32 8.12 -51.93 -0.42 -0.10 16 28 H 0.10 0.16 8.14 -51.93 -0.42 -0.26 16 29 H 0.10 0.15 8.14 -51.93 -0.42 -0.27 16 30 H 0.43 2.76 8.82 -40.82 -0.36 2.40 16 31 H 0.41 8.52 8.07 -40.82 -0.33 8.19 16 32 H 0.28 7.10 8.31 -40.82 -0.34 6.76 16 33 H 0.19 2.67 7.99 -52.48 -0.42 2.25 16 LS Contribution 322.24 15.07 4.86 4.86 Total: -1.00 -32.61 322.24 -4.70 -37.31 By element: Atomic # 1 Polarization: 7.81 SS G_CDS: -2.19 Total: 5.62 kcal Atomic # 6 Polarization: 19.60 SS G_CDS: -1.20 Total: 18.41 kcal Atomic # 7 Polarization: -52.16 SS G_CDS: 0.33 Total: -51.83 kcal Atomic # 8 Polarization: -18.70 SS G_CDS: 0.16 Total: -18.53 kcal Atomic # 9 Polarization: -12.93 SS G_CDS: 0.11 Total: -12.82 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -4.59 Total: 15.90 kcal Atomic # 16 Polarization: 3.27 SS G_CDS: -2.18 Total: 1.09 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -32.61 -4.70 -37.31 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928815108.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.153 kcal (2) G-P(sol) polarization free energy of solvation -32.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -181.462 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds