Wall clock time and date at job start Tue Mar 31 2020 19:50:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47217 * 2 1 4 4 C 1.53005 * 109.47320 * 120.00666 * 2 1 3 5 5 O 1.42901 * 109.47224 * 175.00267 * 4 2 1 6 6 C 1.35526 * 116.99788 * 179.97438 * 5 4 2 7 7 N 1.32411 * 119.52561 * 0.02562 * 6 5 4 8 8 C 1.31644 * 121.82082 * 180.02562 * 7 6 5 9 9 C 1.39617 * 120.63714 * 0.02562 * 8 7 6 10 10 C 1.47518 * 120.50011 * 179.97438 * 9 8 7 11 11 O 1.21615 * 120.00060 * 119.87622 * 10 9 8 12 12 N 1.34783 * 119.99741 * 299.88224 * 10 9 8 13 13 C 1.36898 * 119.99874 * 184.17423 * 12 10 9 14 14 H 1.08001 * 120.00383 * 342.86258 * 13 12 10 15 15 C 1.39022 * 120.00332 * 162.86445 * 13 12 10 16 16 N 1.31391 * 119.99578 * 330.32895 * 15 13 12 17 17 Si 1.86798 * 120.00405 * 150.32629 * 15 13 12 18 18 H 1.48510 * 109.46817 * 60.00295 * 17 15 13 19 19 H 1.48497 * 109.47169 * 179.97438 * 17 15 13 20 20 H 1.48493 * 109.47315 * 300.00407 * 17 15 13 21 21 C 1.46500 * 120.00094 * 4.16949 * 12 10 9 22 22 C 1.47197 * 109.47098 * 269.29166 * 21 12 10 23 23 N 8.27846 * 125.14542 * 85.95177 * 2 1 3 24 24 C 1.40303 * 119.00125 * 0.23204 * 9 8 7 25 25 C 1.38076 * 118.34121 * 359.50129 * 24 9 8 26 26 Cl 1.73590 * 120.37595 * 180.21944 * 25 24 9 27 27 H 1.09001 * 109.47220 * 299.99223 * 1 2 3 28 28 H 1.08997 * 109.47208 * 59.99837 * 1 2 3 29 29 H 1.09002 * 109.46787 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47095 * 240.00241 * 2 1 3 31 31 H 1.08995 * 109.47479 * 300.00610 * 3 2 1 32 32 H 1.09000 * 109.46891 * 60.00116 * 3 2 1 33 33 H 1.09001 * 109.47108 * 179.97438 * 3 2 1 34 34 H 1.09000 * 109.47477 * 54.99653 * 4 2 1 35 35 H 1.09001 * 109.46628 * 294.99842 * 4 2 1 36 36 H 1.08001 * 119.68057 * 179.97438 * 8 7 6 37 37 H 0.96996 * 119.99487 * 179.97438 * 16 15 13 38 38 H 1.08995 * 109.47000 * 149.29150 * 21 12 10 39 39 H 1.09002 * 109.47099 * 29.29270 * 21 12 10 40 40 H 1.08002 * 120.82962 * 179.74858 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7214 1.2492 5 8 3.4643 -0.8239 1.1919 6 6 4.0789 -1.4408 2.2304 7 7 3.3523 -1.9128 3.2317 8 6 3.9022 -2.5191 4.2627 9 6 5.2865 -2.6858 4.3349 10 6 5.8994 -3.3652 5.4920 11 8 6.5535 -4.3771 5.3266 12 7 5.7346 -2.8645 6.7325 13 6 6.3729 -3.4450 7.7953 14 1 6.7757 -4.4429 7.7040 15 6 6.5028 -2.7500 8.9923 16 7 6.5751 -1.4381 8.9856 17 14 6.5746 -3.6811 10.6101 18 1 7.7408 -4.6005 10.6007 19 1 6.7142 -2.7167 11.7306 20 1 5.3265 -4.4666 10.7849 21 6 4.8723 -1.6991 6.9434 22 6 5.6744 -0.4695 6.8365 23 7 6.2955 0.4779 6.7524 24 6 6.0863 -2.1925 3.2931 25 6 5.4655 -1.5686 2.2292 26 17 6.4035 -0.9437 0.9090 27 1 -0.3634 0.5137 0.8901 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.6767 1.9564 -0.8899 32 1 1.6767 1.9562 0.8900 33 1 3.1300 1.4424 0.0005 34 1 1.6055 -1.7200 1.2951 35 1 1.7517 -0.1585 2.1369 36 1 3.2764 -2.8905 5.0608 37 1 6.6653 -0.9532 9.8208 38 1 4.4226 -1.7545 7.9347 39 1 4.0864 -1.6871 6.1881 40 1 7.1604 -2.3016 3.3206 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000183328225.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:50:32 Heat of formation + Delta-G solvation = -7.455452 kcal Electronic energy + Delta-G solvation = -26476.169076 eV Core-core repulsion = 22511.123546 eV Total energy + Delta-G solvation = -3965.045530 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.79559 -39.16611 -37.87769 -36.49789 -35.87391 -35.42971 -34.34559 -32.35292 -32.13892 -30.41132 -27.61711 -27.40394 -26.89735 -25.37297 -23.69478 -23.26368 -20.46938 -19.99138 -18.57740 -18.14526 -17.34651 -17.04022 -16.45575 -16.25395 -15.30591 -15.14707 -14.86552 -14.57211 -14.38870 -14.16625 -13.67206 -13.40164 -13.19680 -13.07569 -12.99463 -12.83487 -12.52620 -12.41228 -12.11494 -11.98584 -11.72958 -11.51419 -11.38160 -11.35730 -11.20403 -11.09045 -10.90328 -10.78084 -10.65987 -10.49689 -10.46619 -9.91665 -9.64646 -9.38957 -8.85034 -8.31340 -8.19338 -6.69749 -4.11280 0.90158 1.14314 2.09273 2.83101 3.00397 3.15162 3.17196 3.34359 3.53408 3.84207 3.94527 4.04135 4.23452 4.50318 4.54109 4.61113 4.71135 4.76552 4.90659 5.00308 5.11769 5.22965 5.27291 5.32166 5.37786 5.40706 5.46048 5.61196 5.68453 5.72421 5.80085 5.86386 6.00487 6.08790 6.11148 6.20100 6.27232 7.10662 7.32198 7.65136 7.72198 8.09878 8.75560 8.81269 9.00098 9.53328 10.34110 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.016741 B = 0.003145 C = 0.002996 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1672.174936 B = 8900.239707 C = 9342.329542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.096 4.096 3 C -0.148 4.148 4 C 0.073 3.927 5 O -0.293 6.293 6 C 0.333 3.667 7 N -0.523 5.523 8 C 0.156 3.844 9 C -0.168 4.168 10 C 0.492 3.508 11 O -0.562 6.562 12 N -0.423 5.423 13 C -0.325 4.325 14 H 0.115 0.885 15 C 0.039 3.961 16 N -0.851 5.851 17 Si 0.925 3.075 18 H -0.270 1.270 19 H -0.284 1.284 20 H -0.269 1.269 21 C 0.215 3.785 22 C 0.241 3.759 23 N -0.460 5.460 24 C 0.002 3.998 25 C -0.107 4.107 26 Cl -0.048 7.048 27 H 0.059 0.941 28 H 0.062 0.938 29 H 0.058 0.942 30 H 0.080 0.920 31 H 0.055 0.945 32 H 0.054 0.946 33 H 0.063 0.937 34 H 0.068 0.932 35 H 0.069 0.931 36 H 0.175 0.825 37 H 0.278 0.722 38 H 0.118 0.882 39 H 0.089 0.911 40 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.108 2.657 -12.590 17.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.115 4.115 3 C -0.205 4.205 4 C -0.002 4.002 5 O -0.200 6.200 6 C 0.153 3.847 7 N -0.247 5.247 8 C -0.001 4.001 9 C -0.174 4.174 10 C 0.280 3.720 11 O -0.445 6.445 12 N -0.141 5.141 13 C -0.451 4.451 14 H 0.132 0.868 15 C -0.168 4.168 16 N -0.487 5.487 17 Si 0.750 3.250 18 H -0.195 1.195 19 H -0.210 1.210 20 H -0.194 1.194 21 C 0.087 3.913 22 C -0.078 4.078 23 N -0.140 5.140 24 C -0.024 4.024 25 C -0.136 4.136 26 Cl -0.019 7.019 27 H 0.078 0.922 28 H 0.081 0.919 29 H 0.077 0.923 30 H 0.098 0.902 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.082 0.918 34 H 0.086 0.914 35 H 0.087 0.913 36 H 0.192 0.808 37 H 0.089 0.911 38 H 0.135 0.865 39 H 0.107 0.893 40 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -11.557 3.998 -13.031 17.871 hybrid contribution 0.748 -0.632 1.085 1.462 sum -10.809 3.365 -11.947 16.459 Atomic orbital electron populations 1.21761 0.93761 1.02232 1.02407 1.21168 0.95871 0.96961 0.97496 1.21832 1.02046 0.94995 1.01654 1.22793 0.77341 1.01146 0.98904 1.86230 1.23224 1.71740 1.38777 1.19473 0.87491 0.90648 0.87094 1.67447 1.38983 1.15512 1.02738 1.22795 0.91853 0.91626 0.93823 1.21138 0.94671 1.03399 0.98221 1.17502 0.85238 0.87601 0.81664 1.90685 1.44000 1.25680 1.84086 1.43637 1.40153 1.24484 1.05871 1.19681 1.37069 1.00649 0.87719 0.86752 1.25354 0.95797 0.95214 1.00432 1.69885 1.43105 1.06788 1.28890 0.86008 0.79528 0.79323 0.80111 1.19529 1.20972 1.19384 1.18869 0.89739 0.78754 1.03933 1.28911 0.94024 0.93831 0.90994 1.80863 1.07910 1.13573 1.11700 1.21352 1.01401 0.90590 0.89067 1.20650 0.89441 1.08708 0.94827 1.98358 1.71907 1.85805 1.45836 0.92226 0.91879 0.92302 0.90204 0.92623 0.92644 0.91788 0.91379 0.91275 0.80796 0.91148 0.86459 0.89330 0.82863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.96 9.19 37.16 0.34 -0.62 16 2 C -0.10 -0.82 3.16 -90.62 -0.29 -1.11 16 3 C -0.15 -1.28 9.09 37.16 0.34 -0.94 16 4 C 0.07 0.79 4.68 37.16 0.17 0.96 16 5 O -0.29 -3.95 9.10 -18.27 -0.17 -4.12 16 6 C 0.33 5.03 7.49 -16.93 -0.13 4.90 16 7 N -0.52 -7.69 9.18 -12.92 -0.12 -7.81 16 8 C 0.16 2.33 8.83 -17.12 -0.15 2.18 16 9 C -0.17 -3.00 4.97 -104.82 -0.52 -3.52 16 10 C 0.49 10.70 7.10 -12.47 -0.09 10.62 16 11 O -0.56 -14.22 16.74 5.26 0.09 -14.14 16 12 N -0.42 -9.32 2.58 -119.13 -0.31 -9.63 16 13 C -0.32 -7.90 9.27 -15.00 -0.14 -8.04 16 14 H 0.11 2.94 7.42 -52.49 -0.39 2.55 16 15 C 0.04 0.91 4.66 -17.45 -0.08 0.83 16 16 N -0.85 -20.68 9.65 55.50 0.54 -20.15 16 17 Si 0.92 18.45 29.64 -169.99 -5.04 13.41 16 18 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 19 H -0.28 -5.70 7.11 56.52 0.40 -5.30 16 20 H -0.27 -5.20 7.11 56.52 0.40 -4.80 16 21 C 0.21 4.04 4.97 -6.83 -0.03 4.00 16 22 C 0.24 5.26 12.98 -20.76 -0.27 4.99 16 23 N -0.46 -10.96 18.54 42.15 0.78 -10.17 16 24 C 0.00 0.04 9.73 -38.87 -0.38 -0.34 16 25 C -0.11 -1.68 6.35 -39.27 -0.25 -1.93 16 26 Cl -0.05 -0.68 28.52 -51.86 -1.48 -2.16 16 27 H 0.06 0.39 8.14 -51.93 -0.42 -0.04 16 28 H 0.06 0.36 8.14 -51.93 -0.42 -0.06 16 29 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 30 H 0.08 0.69 8.14 -51.93 -0.42 0.26 16 31 H 0.05 0.41 8.14 -51.93 -0.42 -0.02 16 32 H 0.05 0.47 8.14 -51.93 -0.42 0.05 16 33 H 0.06 0.64 7.82 -51.93 -0.41 0.24 16 34 H 0.07 0.71 8.10 -51.93 -0.42 0.29 16 35 H 0.07 0.75 8.10 -51.93 -0.42 0.33 16 36 H 0.18 2.12 7.27 -52.49 -0.38 1.74 16 37 H 0.28 6.56 8.31 -40.82 -0.34 6.22 16 38 H 0.12 2.14 7.09 -51.93 -0.37 1.77 16 39 H 0.09 1.33 4.39 -51.93 -0.23 1.10 16 40 H 0.15 2.60 8.06 -52.49 -0.42 2.18 16 LS Contribution 363.15 15.07 5.47 5.47 Total: -1.00 -29.53 363.15 -6.41 -35.94 By element: Atomic # 1 Polarization: 6.06 SS G_CDS: -4.71 Total: 1.35 kcal Atomic # 6 Polarization: 13.47 SS G_CDS: -1.47 Total: 11.99 kcal Atomic # 7 Polarization: -48.65 SS G_CDS: 0.89 Total: -47.76 kcal Atomic # 8 Polarization: -18.18 SS G_CDS: -0.08 Total: -18.26 kcal Atomic # 14 Polarization: 18.45 SS G_CDS: -5.04 Total: 13.41 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.48 Total: -2.16 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -29.53 -6.41 -35.94 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000183328225.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.488 kcal (2) G-P(sol) polarization free energy of solvation -29.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.943 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds