Wall clock time and date at job start Tue Mar 31 2020 19:40:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38643 * 120.80665 * 2 1 4 4 C 1.38160 * 119.25103 * 180.27627 * 3 2 1 5 5 N 1.31911 * 120.89877 * 359.72243 * 4 3 2 6 6 C 1.31881 * 121.76446 * 0.02562 * 5 4 3 7 7 Cl 1.73599 * 119.67635 * 179.97438 * 6 5 4 8 8 C 1.38912 * 120.65400 * 0.02562 * 6 5 4 9 9 O 1.35933 * 120.47940 * 179.97438 * 8 6 5 10 10 C 1.42898 * 117.00226 * 89.99609 * 9 8 6 11 11 C 1.50703 * 109.47171 * 180.02562 * 10 9 8 12 12 O 1.21278 * 119.99985 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00161 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00271 * 180.02562 * 13 11 10 15 15 C 1.50699 * 109.47398 * 89.99557 * 14 13 11 16 16 H 1.08003 * 120.00015 * 0.02562 * 15 14 13 17 17 C 1.37873 * 120.00048 * 180.02562 * 15 14 13 18 18 N 1.31511 * 120.00473 * 0.02562 * 17 15 14 19 19 Si 1.86800 * 119.99797 * 180.02562 * 17 15 14 20 20 H 1.48493 * 109.47398 * 359.97438 * 19 17 15 21 21 H 1.48498 * 109.47236 * 120.00416 * 19 17 15 22 22 H 1.48507 * 109.47103 * 240.00011 * 19 17 15 23 23 C 1.46505 * 119.99832 * 359.97438 * 13 11 10 24 24 C 1.52994 * 109.47022 * 90.00138 * 23 13 11 25 25 C 1.47206 * 109.47290 * 179.97438 * 24 23 13 26 26 N 7.18114 * 75.78492 * 113.22278 * 2 1 3 27 27 H 1.09000 * 109.47220 * 270.24711 * 1 2 3 28 28 H 1.09000 * 109.47028 * 30.24290 * 1 2 3 29 29 H 1.08995 * 109.47092 * 150.24443 * 1 2 3 30 30 H 1.08007 * 120.37546 * 359.97438 * 3 2 1 31 31 H 1.07993 * 119.54873 * 179.70274 * 4 3 2 32 32 H 1.09002 * 109.47259 * 300.00270 * 10 9 8 33 33 H 1.09001 * 109.47074 * 60.00292 * 10 9 8 34 34 H 1.09000 * 109.47082 * 209.99555 * 14 13 11 35 35 H 1.09004 * 109.46754 * 329.99821 * 14 13 11 36 36 H 0.96999 * 120.00725 * 179.97438 * 18 17 15 37 37 H 1.08997 * 109.47024 * 210.00620 * 23 13 11 38 38 H 1.09000 * 109.46875 * 330.00379 * 23 13 11 39 39 H 1.09005 * 109.47443 * 299.99879 * 24 23 13 40 40 H 1.09000 * 109.47099 * 60.00377 * 24 23 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2170 1.1908 0.0000 4 6 3.5981 1.1533 -0.0058 5 7 4.2445 0.0034 -0.0058 6 6 3.6073 -1.1512 -0.0009 7 17 4.5126 -2.6325 -0.0019 8 6 2.2189 -1.1939 0.0041 9 8 1.5657 -2.3861 0.0086 10 6 1.2586 -2.9526 1.2840 11 6 0.5406 -4.2636 1.0916 12 8 0.3138 -4.6722 -0.0276 13 7 0.1495 -4.9814 2.1631 14 6 -0.5480 -6.2561 1.9761 15 6 0.4594 -7.3750 1.9099 16 1 1.5137 -7.1584 1.9988 17 6 0.0350 -8.6752 1.7360 18 7 -1.2488 -8.9390 1.6272 19 14 1.2837 -10.0622 1.6548 20 1 2.6524 -9.5053 1.8014 21 1 1.0218 -11.0288 2.7512 22 1 1.1694 -10.7551 0.3462 23 6 0.4229 -4.4876 3.5151 24 6 -0.7469 -3.6226 3.9883 25 6 -0.4725 -3.1269 5.3469 26 7 -0.2565 -2.7449 6.3973 27 1 -0.3633 0.0044 1.0276 28 1 -0.3633 0.8878 -0.5176 29 1 -0.3633 -0.8921 -0.5100 30 1 1.6964 2.1371 -0.0004 31 1 4.1560 2.0780 -0.0107 32 1 2.1818 -3.1224 1.8381 33 1 0.6207 -2.2671 1.8420 34 1 -1.2252 -6.4259 2.8131 35 1 -1.1182 -6.2253 1.0476 36 1 -1.5473 -9.8537 1.5044 37 1 0.5474 -5.3325 4.1922 38 1 1.3354 -3.8914 3.5064 39 1 -0.8714 -2.7776 3.3111 40 1 -1.6594 -4.2188 3.9969 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271604345.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:40:06 Heat of formation + Delta-G solvation = -12.500961 kcal Electronic energy + Delta-G solvation = -26352.059859 eV Core-core repulsion = 22386.795539 eV Total energy + Delta-G solvation = -3965.264319 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.98466 -39.48578 -37.88027 -36.86566 -36.76184 -35.30243 -33.98454 -32.95457 -30.95749 -30.85931 -29.12273 -28.01914 -26.55970 -24.13494 -23.64564 -22.78520 -22.48232 -18.90423 -18.26116 -17.84488 -17.59364 -16.96326 -16.57924 -16.44529 -15.89941 -15.29148 -15.08842 -14.85742 -14.75062 -14.33462 -13.94662 -13.63541 -13.60527 -13.45360 -13.17945 -13.01541 -12.83150 -12.52430 -12.36708 -12.15838 -12.04508 -11.83175 -11.79861 -11.34973 -11.34144 -11.09491 -10.95390 -10.71270 -10.65352 -10.22425 -9.78766 -9.74811 -9.68709 -9.11443 -9.07510 -8.50686 -7.96273 -6.12427 -4.17058 0.45909 0.69473 1.65981 2.61488 2.71579 2.82208 3.12199 3.27112 3.30127 3.35810 3.40033 3.71725 4.10709 4.15453 4.29299 4.39605 4.53743 4.66775 4.78572 4.85639 4.89586 4.95132 5.06775 5.09842 5.18269 5.23736 5.25579 5.35404 5.43061 5.70817 5.71559 5.80828 5.95832 6.00287 6.77115 7.06117 7.26215 7.34629 7.38223 7.49008 7.83724 8.09603 8.12899 8.73871 8.89967 9.48915 10.95779 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.010509 B = 0.003654 C = 0.003105 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2663.743143 B = 7661.822676 C = 9015.407445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.045 4.045 3 C -0.162 4.162 4 C 0.112 3.888 5 N -0.471 5.471 6 C 0.160 3.840 7 Cl -0.012 7.012 8 C 0.063 3.937 9 O -0.290 6.290 10 C 0.043 3.957 11 C 0.512 3.488 12 O -0.505 6.505 13 N -0.593 5.593 14 C 0.247 3.753 15 C -0.530 4.530 16 H 0.060 0.940 17 C 0.064 3.936 18 N -0.893 5.893 19 Si 0.896 3.104 20 H -0.273 1.273 21 H -0.283 1.283 22 H -0.282 1.282 23 C 0.113 3.887 24 C -0.051 4.051 25 C 0.215 3.785 26 N -0.442 5.442 27 H 0.080 0.920 28 H 0.077 0.923 29 H 0.087 0.913 30 H 0.146 0.854 31 H 0.168 0.832 32 H 0.082 0.918 33 H 0.079 0.921 34 H 0.038 0.962 35 H 0.049 0.951 36 H 0.264 0.736 37 H 0.099 0.901 38 H 0.073 0.927 39 H 0.105 0.895 40 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.641 20.976 -0.166 21.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.053 4.053 3 C -0.182 4.182 4 C -0.045 4.045 5 N -0.184 5.184 6 C -0.005 4.005 7 Cl 0.017 6.983 8 C 0.016 3.984 9 O -0.204 6.204 10 C -0.034 4.034 11 C 0.296 3.704 12 O -0.379 6.379 13 N -0.327 5.327 14 C 0.128 3.872 15 C -0.569 4.569 16 H 0.078 0.922 17 C -0.139 4.139 18 N -0.532 5.532 19 Si 0.724 3.276 20 H -0.197 1.197 21 H -0.210 1.210 22 H -0.208 1.208 23 C -0.013 4.013 24 C -0.092 4.092 25 C -0.103 4.103 26 N -0.120 5.120 27 H 0.099 0.901 28 H 0.096 0.904 29 H 0.106 0.894 30 H 0.164 0.836 31 H 0.185 0.815 32 H 0.100 0.900 33 H 0.097 0.903 34 H 0.056 0.944 35 H 0.067 0.933 36 H 0.073 0.927 37 H 0.118 0.882 38 H 0.091 0.909 39 H 0.123 0.877 40 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 4.607 20.872 0.590 21.382 hybrid contribution -0.049 -0.975 -0.194 0.995 sum 4.558 19.897 0.396 20.416 Atomic orbital electron populations 1.20837 0.88740 1.04662 1.03403 1.20752 0.98050 0.91472 0.95075 1.22124 0.95244 0.98618 1.02186 1.22695 0.91785 0.95069 0.94922 1.67090 1.40922 0.97241 1.13116 1.22360 0.88479 0.89694 0.99923 1.98453 1.75297 1.28446 1.96086 1.19167 0.88976 0.86976 1.03328 1.86188 1.75050 1.31592 1.27620 1.22765 1.00619 0.95177 0.84872 1.19677 0.80406 0.84619 0.85658 1.90747 1.53839 1.70025 1.23248 1.48157 1.58209 1.23212 1.03096 1.19408 0.92165 0.76913 0.98670 1.21448 0.93597 0.91335 1.50543 0.92218 1.24899 0.95343 0.98750 0.94871 1.69917 1.13563 1.20280 1.49401 0.86466 0.81504 0.81894 0.77728 1.19749 1.20961 1.20830 1.21373 0.94915 0.98723 0.86315 1.19906 1.03127 1.01304 0.84876 1.29173 0.93214 0.93130 0.94830 1.81319 1.08801 1.09707 1.12126 0.90146 0.90372 0.89401 0.83591 0.81486 0.90041 0.90339 0.94385 0.93348 0.92669 0.88217 0.90859 0.87735 0.86154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.90 9.86 36.00 0.35 -0.55 16 2 C -0.05 -0.43 5.93 -104.19 -0.62 -1.05 16 3 C -0.16 -1.19 9.81 -39.46 -0.39 -1.57 16 4 C 0.11 0.94 11.17 -17.55 -0.20 0.74 16 5 N -0.47 -5.65 10.34 -10.25 -0.11 -5.75 16 6 C 0.16 2.12 7.29 -17.28 -0.13 2.00 16 7 Cl -0.01 -0.16 28.66 -51.86 -1.49 -1.65 16 8 C 0.06 0.80 5.72 -39.05 -0.22 0.58 16 9 O -0.29 -4.34 8.24 -39.44 -0.32 -4.66 16 10 C 0.04 0.58 5.09 36.01 0.18 0.76 16 11 C 0.51 9.30 7.75 -10.98 -0.09 9.21 16 12 O -0.50 -11.81 16.08 -14.35 -0.23 -12.04 16 13 N -0.59 -10.39 2.46 -175.06 -0.43 -10.82 16 14 C 0.25 5.64 5.16 -5.20 -0.03 5.61 16 15 C -0.53 -13.91 9.39 -34.44 -0.32 -14.24 16 16 H 0.06 1.58 7.81 -52.48 -0.41 1.17 16 17 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 18 N -0.89 -25.08 13.29 55.43 0.74 -24.34 16 19 Si 0.90 21.12 29.54 -169.99 -5.02 16.10 16 20 H -0.27 -6.39 7.11 56.52 0.40 -5.98 16 21 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 22 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 23 C 0.11 1.41 5.17 -4.04 -0.02 1.39 16 24 C -0.05 -0.47 6.03 -29.52 -0.18 -0.65 16 25 C 0.21 2.40 15.44 -20.68 -0.32 2.08 16 26 N -0.44 -6.17 18.55 42.25 0.78 -5.39 16 27 H 0.08 0.49 8.14 -51.93 -0.42 0.06 16 28 H 0.08 0.43 8.10 -51.93 -0.42 0.00 16 29 H 0.09 0.83 7.62 -51.93 -0.40 0.44 16 30 H 0.15 0.58 8.06 -52.48 -0.42 0.16 16 31 H 0.17 0.82 8.06 -52.49 -0.42 0.39 16 32 H 0.08 1.01 7.40 -51.93 -0.38 0.63 16 33 H 0.08 0.76 7.18 -51.93 -0.37 0.38 16 34 H 0.04 0.85 8.07 -51.93 -0.42 0.43 16 35 H 0.05 1.27 7.42 -51.93 -0.39 0.88 16 36 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 37 H 0.10 1.32 8.07 -51.93 -0.42 0.91 16 38 H 0.07 0.76 6.44 -51.93 -0.33 0.42 16 39 H 0.10 0.74 7.22 -51.93 -0.37 0.36 16 40 H 0.12 1.10 8.14 -51.93 -0.42 0.68 16 LS Contribution 373.79 15.07 5.63 5.63 Total: -1.00 -34.53 373.79 -7.25 -41.78 By element: Atomic # 1 Polarization: -0.07 SS G_CDS: -4.74 Total: -4.81 kcal Atomic # 6 Polarization: 8.01 SS G_CDS: -2.06 Total: 5.94 kcal Atomic # 7 Polarization: -47.28 SS G_CDS: 0.98 Total: -46.30 kcal Atomic # 8 Polarization: -16.15 SS G_CDS: -0.56 Total: -16.70 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.02 Total: 16.10 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.49 Total: -1.65 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -34.53 -7.25 -41.78 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271604345.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.276 kcal (2) G-P(sol) polarization free energy of solvation -34.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds