Wall clock time and date at job start Tue Mar 31 2020 19:38:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31006 * 1 3 3 C 1.50700 * 119.99803 * 2 1 4 4 N 1.46504 * 109.46813 * 125.00137 * 3 2 1 5 5 C 1.46497 * 119.99741 * 274.94859 * 4 3 2 6 6 C 1.50706 * 109.46822 * 263.11477 * 5 4 3 7 7 H 1.07993 * 120.00138 * 0.02562 * 6 5 4 8 8 C 1.37882 * 119.99549 * 180.02562 * 6 5 4 9 9 N 1.31520 * 119.99528 * 180.02562 * 8 6 5 10 10 Si 1.86799 * 120.00455 * 0.02562 * 8 6 5 11 11 H 1.48503 * 109.46976 * 89.99699 * 10 8 6 12 12 H 1.48491 * 109.47227 * 210.00037 * 10 8 6 13 13 H 1.48495 * 109.46922 * 330.00151 * 10 8 6 14 14 C 1.34769 * 119.99909 * 94.94611 * 4 3 2 15 15 O 1.21363 * 119.99876 * 3.69372 * 14 4 3 16 16 C 1.49363 * 120.00099 * 183.68889 * 14 4 3 17 17 O 1.21364 * 119.99809 * 354.26882 * 16 14 4 18 18 N 1.34781 * 120.00121 * 174.26824 * 16 14 4 19 19 C 1.39284 * 119.99980 * 180.02562 * 18 16 14 20 20 N 1.32400 * 119.68329 * 359.97438 * 19 18 16 21 21 C 1.31889 * 121.64450 * 179.97438 * 20 19 18 22 22 C 1.38258 * 120.83639 * 0.02562 * 21 20 19 23 23 Cl 1.73596 * 120.35671 * 180.02562 * 22 21 20 24 24 C 1.38894 * 119.28614 * 359.97438 * 22 21 20 25 25 C 1.38389 * 118.48258 * 0.02562 * 24 22 21 26 26 C 1.50709 * 120.43960 * 179.97438 * 25 24 22 27 27 H 1.07995 * 120.00208 * 0.02562 * 1 2 3 28 28 H 1.08001 * 119.99588 * 179.97438 * 1 2 3 29 29 H 1.08001 * 119.99683 * 180.02562 * 2 1 3 30 30 H 1.09000 * 109.47054 * 5.00213 * 3 2 1 31 31 H 1.09000 * 109.46903 * 245.00104 * 3 2 1 32 32 H 1.08999 * 109.47821 * 23.11750 * 5 4 3 33 33 H 1.08999 * 109.47091 * 143.11748 * 5 4 3 34 34 H 0.97001 * 119.99989 * 180.02562 * 9 8 6 35 35 H 0.96993 * 119.99684 * 359.97438 * 18 16 14 36 36 H 1.08002 * 119.58468 * 180.28260 * 21 20 19 37 37 H 1.07994 * 120.75172 * 180.02562 * 24 22 21 38 38 H 1.08998 * 109.46841 * 90.00063 * 26 25 24 39 39 H 1.08991 * 109.47163 * 210.00460 * 26 25 24 40 40 H 1.09001 * 109.46851 * 330.00782 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3101 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9938 1.3319 1.1315 5 6 2.5287 1.7631 2.4520 6 6 2.8688 3.2173 2.6542 7 1 3.3799 3.7654 1.8766 8 6 2.5275 3.8478 3.8319 9 7 2.8239 5.1169 4.0081 10 14 1.6442 2.8994 5.1772 11 1 2.6437 2.2832 6.0864 12 1 0.7779 3.8261 5.9490 13 1 0.8090 1.8348 4.5656 14 6 4.2774 0.9597 0.9574 15 8 4.6794 0.6668 -0.1496 16 6 5.2051 0.9079 2.1269 17 8 4.8336 1.2995 3.2139 18 7 6.4547 0.4263 1.9749 19 6 7.3196 0.3775 3.0656 20 7 6.9079 0.8064 4.2486 21 6 7.6941 0.7775 5.3072 22 6 8.9865 0.2947 5.2170 23 17 10.0104 0.2618 6.6185 24 6 9.4564 -0.1646 3.9934 25 6 8.6070 -0.1210 2.9017 26 6 9.0715 -0.6074 1.5530 27 1 -0.5400 0.9352 -0.0004 28 1 -0.5399 -0.9354 -0.0004 29 1 1.8500 -0.9353 -0.0004 30 1 1.3586 2.1316 0.0896 31 1 2.6213 1.4026 -0.9314 32 1 1.4489 1.6299 2.5184 33 1 3.0165 1.1654 3.2220 34 1 2.5842 5.5605 4.8368 35 1 6.7514 0.1131 1.1063 36 1 7.3223 1.1315 6.2573 37 1 10.4617 -0.5470 3.8962 38 1 8.8463 -1.6692 1.4525 39 1 8.5574 -0.0512 0.7693 40 1 10.1468 -0.4539 1.4620 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000293068378.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:38:07 Heat of formation + Delta-G solvation = 18.475358 kcal Electronic energy + Delta-G solvation = -26801.134753 eV Core-core repulsion = 22837.213667 eV Total energy + Delta-G solvation = -3963.921085 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.08267 -39.86192 -37.99898 -36.71287 -36.08237 -34.82421 -33.73452 -33.25009 -32.12459 -30.55484 -28.18400 -27.62083 -26.64011 -24.62643 -23.00648 -22.38265 -21.69956 -20.13844 -19.38078 -18.09360 -17.22429 -16.98781 -16.38668 -16.16642 -15.93613 -15.57682 -15.21327 -14.76164 -14.45134 -14.30732 -13.99856 -13.77896 -13.31388 -13.16089 -13.15521 -12.94190 -12.88054 -12.36107 -12.24428 -12.11566 -11.97495 -11.66018 -11.33120 -11.27316 -10.98774 -10.74722 -10.50328 -10.36894 -10.17946 -9.73537 -9.64450 -9.53055 -9.28984 -8.66577 -8.43825 -8.16986 -7.95621 -6.05377 -4.03770 0.80951 1.08202 1.96394 2.03442 2.27732 2.69665 3.34486 3.38830 3.43455 3.51013 3.81496 3.90022 4.35859 4.45089 4.56704 4.63896 4.67058 4.87539 5.07270 5.16355 5.29341 5.33583 5.34197 5.35373 5.65101 5.72102 5.75688 5.84513 5.99013 6.09075 6.13771 6.36932 6.53639 6.73129 6.82983 6.90627 7.05116 7.15577 7.56355 7.79886 7.92592 8.23132 8.43971 8.54549 8.94642 9.55020 11.07825 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.011004 B = 0.004015 C = 0.003161 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2544.025134 B = 6971.767569 C = 8855.037551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.162 4.162 3 C 0.137 3.863 4 N -0.549 5.549 5 C 0.192 3.808 6 C -0.521 4.521 7 H 0.072 0.928 8 C 0.083 3.917 9 N -0.896 5.896 10 Si 0.874 3.126 11 H -0.270 1.270 12 H -0.288 1.288 13 H -0.267 1.267 14 C 0.513 3.487 15 O -0.556 6.556 16 C 0.482 3.518 17 O -0.387 6.387 18 N -0.645 5.645 19 C 0.377 3.623 20 N -0.454 5.454 21 C 0.151 3.849 22 C -0.125 4.125 23 Cl -0.065 7.065 24 C -0.040 4.040 25 C -0.166 4.166 26 C -0.109 4.109 27 H 0.100 0.900 28 H 0.096 0.904 29 H 0.106 0.894 30 H 0.091 0.909 31 H 0.092 0.908 32 H 0.031 0.969 33 H 0.066 0.934 34 H 0.264 0.736 35 H 0.424 0.576 36 H 0.168 0.832 37 H 0.146 0.854 38 H 0.077 0.923 39 H 0.070 0.930 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.253 -13.654 -2.808 17.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.181 4.181 3 C 0.015 3.985 4 N -0.278 5.278 5 C 0.072 3.928 6 C -0.560 4.560 7 H 0.090 0.910 8 C -0.120 4.120 9 N -0.534 5.534 10 Si 0.701 3.299 11 H -0.195 1.195 12 H -0.214 1.214 13 H -0.192 1.192 14 C 0.295 3.705 15 O -0.437 6.437 16 C 0.262 3.738 17 O -0.249 6.249 18 N -0.295 5.295 19 C 0.145 3.855 20 N -0.168 5.168 21 C -0.009 4.009 22 C -0.156 4.156 23 Cl -0.036 7.036 24 C -0.067 4.067 25 C -0.172 4.172 26 C -0.167 4.167 27 H 0.118 0.882 28 H 0.114 0.886 29 H 0.124 0.876 30 H 0.109 0.891 31 H 0.110 0.890 32 H 0.049 0.951 33 H 0.083 0.917 34 H 0.074 0.926 35 H 0.263 0.737 36 H 0.185 0.815 37 H 0.164 0.836 38 H 0.095 0.905 39 H 0.089 0.911 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 9.212 -12.970 -2.292 16.073 hybrid contribution 0.635 -0.682 0.539 1.076 sum 9.847 -13.652 -1.753 16.923 Atomic orbital electron populations 1.23837 0.95723 1.01891 1.00761 1.23316 0.96187 0.98919 0.99697 1.20653 0.92217 0.95404 0.90216 1.47904 1.07370 1.59754 1.12761 1.20482 0.95623 0.97761 0.78892 1.21084 1.39240 0.92550 1.03087 0.91007 1.24714 0.95133 0.94566 0.97609 1.69891 1.47094 1.10226 1.26237 0.86878 0.80020 0.80038 0.82928 1.19512 1.21394 1.19217 1.19696 0.83541 0.79172 0.88042 1.90659 1.76325 1.51385 1.25355 1.20496 0.82494 0.80300 0.90499 1.90968 1.72047 1.36033 1.25882 1.43477 1.12380 1.62380 1.11257 1.18400 0.87311 0.92437 0.87352 1.67962 1.34872 1.16474 0.97515 1.22757 0.87636 0.93057 0.97462 1.21953 0.94445 1.09325 0.89848 1.98358 1.67508 1.97438 1.40316 1.21102 0.99877 0.95959 0.89712 1.20237 0.93078 1.06093 0.97825 1.20700 1.02330 1.01591 0.92031 0.88176 0.88597 0.87602 0.89083 0.88988 0.95106 0.91711 0.92626 0.73663 0.81533 0.83642 0.90480 0.91127 0.90522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.36 14.32 29.01 0.42 -1.94 16 2 C -0.16 -2.38 9.84 -36.03 -0.35 -2.73 16 3 C 0.14 2.35 5.90 -5.19 -0.03 2.32 16 4 N -0.55 -11.29 2.46 -176.97 -0.44 -11.73 16 5 C 0.19 4.53 3.86 -5.19 -0.02 4.51 16 6 C -0.52 -14.54 8.86 -34.44 -0.31 -14.84 16 7 H 0.07 2.22 8.06 -52.49 -0.42 1.80 16 8 C 0.08 2.38 5.47 -17.82 -0.10 2.28 16 9 N -0.90 -27.48 13.96 55.43 0.77 -26.71 16 10 Si 0.87 21.71 27.47 -169.99 -4.67 17.04 16 11 H -0.27 -6.79 7.11 56.52 0.40 -6.39 16 12 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 13 H -0.27 -6.24 6.54 56.52 0.37 -5.88 16 14 C 0.51 10.35 7.67 -11.63 -0.09 10.26 16 15 O -0.56 -10.93 15.98 5.49 0.09 -10.84 16 16 C 0.48 9.69 7.73 -11.62 -0.09 9.60 16 17 O -0.39 -9.13 10.61 5.48 0.06 -9.07 16 18 N -0.64 -10.33 5.29 -11.86 -0.06 -10.40 16 19 C 0.38 5.89 7.41 -154.78 -1.15 4.75 16 20 N -0.45 -8.20 7.87 -12.35 -0.10 -8.30 16 21 C 0.15 2.23 10.98 -17.52 -0.19 2.04 16 22 C -0.13 -1.52 6.34 -39.33 -0.25 -1.77 16 23 Cl -0.06 -0.69 28.99 -51.86 -1.50 -2.19 16 24 C -0.04 -0.43 9.65 -39.28 -0.38 -0.81 16 25 C -0.17 -1.93 5.92 -104.27 -0.62 -2.55 16 26 C -0.11 -0.87 9.59 36.01 0.35 -0.53 16 27 H 0.10 1.23 7.84 -52.49 -0.41 0.82 16 28 H 0.10 1.04 8.06 -52.49 -0.42 0.62 16 29 H 0.11 1.51 8.06 -52.49 -0.42 1.09 16 30 H 0.09 1.54 7.76 -51.93 -0.40 1.14 16 31 H 0.09 1.53 7.23 -51.93 -0.38 1.15 16 32 H 0.03 0.71 7.08 -51.93 -0.37 0.34 16 33 H 0.07 1.60 4.84 -51.93 -0.25 1.35 16 34 H 0.26 7.61 8.31 -40.82 -0.34 7.28 16 35 H 0.42 5.55 6.16 -40.82 -0.25 5.29 16 36 H 0.17 2.24 8.06 -52.49 -0.42 1.82 16 37 H 0.15 1.11 8.06 -52.49 -0.42 0.69 16 38 H 0.08 0.52 8.14 -51.93 -0.42 0.10 16 39 H 0.07 0.57 6.56 -51.93 -0.34 0.22 16 40 H 0.08 0.47 8.10 -51.93 -0.42 0.05 16 LS Contribution 359.21 15.07 5.41 5.41 Total: -1.00 -33.58 359.21 -7.77 -41.35 By element: Atomic # 1 Polarization: 9.38 SS G_CDS: -4.53 Total: 4.85 kcal Atomic # 6 Polarization: 13.39 SS G_CDS: -2.81 Total: 10.58 kcal Atomic # 7 Polarization: -57.31 SS G_CDS: 0.18 Total: -57.13 kcal Atomic # 8 Polarization: -20.06 SS G_CDS: 0.15 Total: -19.92 kcal Atomic # 14 Polarization: 21.71 SS G_CDS: -4.67 Total: 17.04 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.50 Total: -2.19 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -33.58 -7.77 -41.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000293068378.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.829 kcal (2) G-P(sol) polarization free energy of solvation -33.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds