Wall clock time and date at job start Tue Mar 31 2020 19:35:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31002 * 1 3 3 C 1.50697 * 119.99674 * 2 1 4 4 N 1.46498 * 109.46898 * 125.00169 * 3 2 1 5 5 C 1.46506 * 120.00113 * 274.81497 * 4 3 2 6 6 C 1.50695 * 109.47195 * 263.67525 * 5 4 3 7 7 H 1.07997 * 120.00108 * 0.02562 * 6 5 4 8 8 C 1.37879 * 119.99728 * 179.97438 * 6 5 4 9 9 N 1.31514 * 120.00327 * 359.97438 * 8 6 5 10 10 Si 1.86803 * 119.99808 * 180.02562 * 8 6 5 11 11 H 1.48498 * 109.47268 * 89.99938 * 10 8 6 12 12 H 1.48498 * 109.46998 * 210.00085 * 10 8 6 13 13 H 1.48506 * 109.46989 * 329.99618 * 10 8 6 14 14 C 1.34775 * 120.00372 * 94.81743 * 4 3 2 15 15 O 1.21362 * 119.99859 * 354.61906 * 14 4 3 16 16 C 1.49344 * 120.00551 * 174.61446 * 14 4 3 17 17 O 1.21382 * 119.99769 * 0.06249 * 16 14 4 18 18 N 1.34775 * 120.00319 * 180.02562 * 16 14 4 19 19 C 1.39795 * 120.00115 * 185.07685 * 18 16 14 20 20 C 1.39366 * 120.47773 * 327.11532 * 19 18 16 21 21 C 1.38438 * 118.36833 * 180.29704 * 20 19 18 22 22 C 1.38435 * 119.23537 * 359.93646 * 21 20 19 23 23 Cl 1.73602 * 119.55419 * 180.02562 * 22 21 20 24 24 N 1.31954 * 120.89463 * 0.06477 * 22 21 20 25 25 C 1.31834 * 121.78218 * 359.97438 * 24 22 21 26 26 C 1.50701 * 119.66186 * 179.97438 * 25 24 22 27 27 H 1.08001 * 119.99508 * 179.97438 * 1 2 3 28 28 H 1.07994 * 120.00245 * 359.97438 * 1 2 3 29 29 H 1.07994 * 120.00245 * 180.02562 * 2 1 3 30 30 H 1.08996 * 109.47657 * 5.00404 * 3 2 1 31 31 H 1.09003 * 109.47479 * 244.99874 * 3 2 1 32 32 H 1.09000 * 109.46488 * 23.67989 * 5 4 3 33 33 H 1.09000 * 109.46928 * 143.67540 * 5 4 3 34 34 H 0.96999 * 120.00547 * 180.02562 * 9 8 6 35 35 H 0.97007 * 120.00239 * 5.08093 * 18 16 14 36 36 H 1.07998 * 120.81398 * 0.25337 * 20 19 18 37 37 H 1.08002 * 120.38381 * 180.02562 * 21 20 19 38 38 H 1.08996 * 109.47916 * 269.98263 * 26 25 24 39 39 H 1.09007 * 109.47002 * 29.98737 * 26 25 24 40 40 H 1.09001 * 109.47286 * 149.97827 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0634 1.3051 0.0000 4 7 2.9937 1.3319 1.1314 5 6 2.5294 1.7659 2.4514 6 6 2.8598 3.2233 2.6460 7 1 3.3647 3.7715 1.8645 8 6 2.5165 3.8569 3.8214 9 7 1.9003 3.1897 4.7726 10 14 2.9254 5.6637 4.0624 11 1 1.7967 6.4961 3.5743 12 1 3.1506 5.9320 5.5055 13 1 4.1543 5.9991 3.2990 14 6 4.2767 0.9573 0.9580 15 8 4.6381 0.5057 -0.1089 16 6 5.2538 1.0981 2.0787 17 8 4.8921 1.5488 3.1461 18 7 6.5369 0.7240 1.9051 19 6 7.4262 0.7557 2.9832 20 6 7.2965 1.7228 3.9783 21 6 8.2050 1.7176 5.0229 22 6 9.2036 0.7592 5.0457 23 17 10.3469 0.7447 6.3521 24 7 9.2988 -0.1431 4.0876 25 6 8.4549 -0.1725 3.0752 26 6 8.6084 -1.2240 2.0066 27 1 -0.5399 -0.9354 -0.0004 28 1 -0.5400 0.9352 0.0004 29 1 1.8500 -0.9352 -0.0004 30 1 1.3586 2.1316 0.0896 31 1 2.6213 1.4027 -0.9314 32 1 1.4508 1.6253 2.5214 33 1 3.0236 1.1752 3.2227 34 1 1.6584 3.6356 5.5994 35 1 6.8433 0.4328 1.0320 36 1 6.5071 2.4585 3.9352 37 1 8.1345 2.4520 5.8117 38 1 9.2601 -0.8482 1.2179 39 1 9.0454 -2.1229 2.4416 40 1 7.6306 -1.4617 1.5876 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000293291132.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:35:56 Heat of formation + Delta-G solvation = 1.341116 kcal Electronic energy + Delta-G solvation = -26796.077711 eV Core-core repulsion = 22831.413629 eV Total energy + Delta-G solvation = -3964.664082 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.08570 -39.86774 -38.13824 -36.71075 -36.05572 -34.85240 -33.38049 -33.08710 -32.16848 -30.78622 -27.81114 -27.61032 -26.48584 -24.43463 -23.19805 -22.53339 -21.80929 -20.07346 -19.38162 -17.91318 -17.08526 -16.82211 -16.67275 -16.35371 -15.90162 -15.40839 -15.07553 -14.85540 -14.52432 -14.36181 -13.96110 -13.79216 -13.43891 -13.07866 -13.00541 -12.77931 -12.45391 -12.36526 -12.30323 -11.77395 -11.61727 -11.58547 -11.33559 -11.24733 -10.98514 -10.92715 -10.65547 -10.54414 -10.11688 -9.84441 -9.80209 -9.57484 -9.26903 -8.78836 -8.39613 -8.19815 -7.98743 -6.11422 -4.14376 0.78556 1.15894 1.78280 1.95409 2.33837 2.81008 3.23605 3.31286 3.33276 3.48677 3.76287 3.97661 4.24558 4.36721 4.62535 4.77067 4.88333 5.09928 5.21099 5.25110 5.34838 5.39384 5.44361 5.46428 5.73058 5.76368 5.90973 6.01432 6.07298 6.15942 6.17818 6.49744 6.65849 6.79514 6.92222 7.15086 7.27847 7.36516 7.65096 7.75972 7.94588 8.07738 8.15241 8.48931 8.85487 9.48445 10.97332 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.010401 B = 0.004026 C = 0.003078 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2691.293946 B = 6953.336361 C = 9093.914061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.160 4.160 3 C 0.140 3.860 4 N -0.553 5.553 5 C 0.229 3.771 6 C -0.517 4.517 7 H 0.054 0.946 8 C 0.071 3.929 9 N -0.888 5.888 10 Si 0.892 3.108 11 H -0.281 1.281 12 H -0.285 1.285 13 H -0.275 1.275 14 C 0.509 3.491 15 O -0.558 6.558 16 C 0.488 3.512 17 O -0.425 6.425 18 N -0.654 5.654 19 C 0.115 3.885 20 C -0.067 4.067 21 C -0.135 4.135 22 C 0.154 3.846 23 Cl -0.040 7.040 24 N -0.462 5.462 25 C 0.117 3.883 26 C -0.105 4.105 27 H 0.095 0.905 28 H 0.099 0.901 29 H 0.106 0.894 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.035 0.965 33 H 0.064 0.936 34 H 0.263 0.737 35 H 0.420 0.580 36 H 0.171 0.829 37 H 0.148 0.852 38 H 0.081 0.919 39 H 0.083 0.917 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.955 -6.017 -4.488 11.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.180 4.180 3 C 0.018 3.982 4 N -0.282 5.282 5 C 0.111 3.889 6 C -0.556 4.556 7 H 0.073 0.927 8 C -0.132 4.132 9 N -0.526 5.526 10 Si 0.719 3.281 11 H -0.207 1.207 12 H -0.211 1.211 13 H -0.200 1.200 14 C 0.291 3.709 15 O -0.439 6.439 16 C 0.270 3.730 17 O -0.291 6.291 18 N -0.303 5.303 19 C 0.017 3.983 20 C -0.095 4.095 21 C -0.157 4.157 22 C -0.011 4.011 23 Cl -0.012 7.012 24 N -0.174 5.174 25 C -0.024 4.024 26 C -0.163 4.163 27 H 0.114 0.886 28 H 0.117 0.883 29 H 0.124 0.876 30 H 0.107 0.893 31 H 0.105 0.895 32 H 0.053 0.947 33 H 0.082 0.918 34 H 0.073 0.927 35 H 0.258 0.742 36 H 0.188 0.812 37 H 0.166 0.834 38 H 0.100 0.900 39 H 0.102 0.898 40 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 9.414 -6.484 -3.910 12.081 hybrid contribution -0.250 1.539 0.116 1.563 sum 9.164 -4.945 -3.795 11.083 Atomic orbital electron populations 1.23814 0.95732 1.01809 1.00827 1.23279 0.96122 0.98939 0.99618 1.20625 0.92196 0.95469 0.89960 1.48284 1.07073 1.59474 1.13415 1.19959 0.96002 0.96353 0.76603 1.21174 1.38813 0.94158 1.01449 0.92750 1.24794 0.94922 0.97959 0.95524 1.69909 1.40036 1.36283 1.06408 0.86610 0.78747 0.85262 0.77441 1.20691 1.21073 1.20016 1.19638 0.83881 0.80111 0.87279 1.90667 1.78943 1.46815 1.27500 1.20532 0.82528 0.79962 0.89971 1.90985 1.76330 1.35940 1.25878 1.43205 1.08623 1.66609 1.11904 1.18599 0.92623 0.95716 0.91383 1.22035 0.98287 0.96919 0.92224 1.21785 0.94012 0.99561 1.00295 1.21486 0.92964 0.94965 0.91675 1.98384 1.60017 1.97930 1.44834 1.66730 1.26281 1.23138 1.01211 1.20913 0.91833 0.95086 0.94550 1.20722 1.03324 0.96748 0.95471 0.88649 0.88285 0.87590 0.89277 0.89509 0.94721 0.91805 0.92737 0.74194 0.81182 0.83409 0.89994 0.89792 0.90282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.42 14.32 29.01 0.42 -2.01 16 2 C -0.16 -2.40 9.84 -36.03 -0.35 -2.76 16 3 C 0.14 2.34 5.83 -5.20 -0.03 2.31 16 4 N -0.55 -11.00 2.46 -176.99 -0.44 -11.44 16 5 C 0.23 5.39 4.78 -5.19 -0.02 5.36 16 6 C -0.52 -13.25 7.78 -34.44 -0.27 -13.52 16 7 H 0.05 1.41 7.81 -52.49 -0.41 1.00 16 8 C 0.07 1.88 5.46 -17.82 -0.10 1.78 16 9 N -0.89 -24.69 13.29 55.43 0.74 -23.95 16 10 Si 0.89 20.63 29.54 -169.99 -5.02 15.61 16 11 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 12 H -0.29 -6.60 7.11 56.52 0.40 -6.20 16 13 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 14 C 0.51 9.76 7.67 -11.64 -0.09 9.67 16 15 O -0.56 -10.54 16.04 5.49 0.09 -10.46 16 16 C 0.49 9.07 7.59 -11.64 -0.09 8.98 16 17 O -0.42 -9.20 9.45 5.47 0.05 -9.15 16 18 N -0.65 -9.72 4.78 -10.19 -0.05 -9.77 16 19 C 0.12 1.71 6.33 -83.58 -0.53 1.18 16 20 C -0.07 -1.05 8.83 -39.09 -0.35 -1.40 16 21 C -0.14 -1.90 9.87 -39.43 -0.39 -2.29 16 22 C 0.15 2.18 7.27 -17.43 -0.13 2.05 16 23 Cl -0.04 -0.50 29.10 -51.86 -1.51 -2.00 16 24 N -0.46 -6.71 10.25 -6.45 -0.07 -6.77 16 25 C 0.12 1.58 6.80 -82.36 -0.56 1.02 16 26 C -0.11 -1.05 9.63 36.01 0.35 -0.70 16 27 H 0.10 1.08 8.06 -52.49 -0.42 0.66 16 28 H 0.10 1.25 7.84 -52.49 -0.41 0.84 16 29 H 0.11 1.58 8.06 -52.49 -0.42 1.16 16 30 H 0.09 1.47 7.76 -51.93 -0.40 1.06 16 31 H 0.09 1.39 7.36 -51.93 -0.38 1.01 16 32 H 0.03 0.86 8.02 -51.93 -0.42 0.44 16 33 H 0.06 1.64 5.85 -51.93 -0.30 1.34 16 34 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 35 H 0.42 5.26 7.25 -40.82 -0.30 4.97 16 36 H 0.17 3.03 6.14 -52.49 -0.32 2.70 16 37 H 0.15 1.77 8.06 -52.49 -0.42 1.35 16 38 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 39 H 0.08 0.79 8.14 -51.93 -0.42 0.37 16 40 H 0.08 0.74 7.14 -51.93 -0.37 0.37 16 LS Contribution 362.17 15.07 5.46 5.46 Total: -1.00 -29.28 362.17 -7.45 -36.73 By element: Atomic # 1 Polarization: 10.61 SS G_CDS: -4.56 Total: 6.04 kcal Atomic # 6 Polarization: 11.84 SS G_CDS: -2.14 Total: 9.70 kcal Atomic # 7 Polarization: -52.12 SS G_CDS: 0.19 Total: -51.93 kcal Atomic # 8 Polarization: -19.75 SS G_CDS: 0.14 Total: -19.61 kcal Atomic # 14 Polarization: 20.63 SS G_CDS: -5.02 Total: 15.61 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.51 Total: -2.00 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -29.28 -7.45 -36.73 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000293291132.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.073 kcal (2) G-P(sol) polarization free energy of solvation -29.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.732 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds