Wall clock time and date at job start Tue Mar 31 2020 19:39:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30999 * 1 3 3 C 1.50697 * 120.00257 * 2 1 4 4 N 1.46499 * 109.47725 * 124.99638 * 3 2 1 5 5 C 1.46498 * 120.00019 * 274.82972 * 4 3 2 6 6 C 1.50702 * 109.47323 * 263.66841 * 5 4 3 7 7 H 1.08003 * 119.99807 * 359.97438 * 6 5 4 8 8 C 1.37871 * 120.00173 * 179.97438 * 6 5 4 9 9 N 1.31511 * 119.99937 * 0.02562 * 8 6 5 10 10 Si 1.86806 * 119.99925 * 179.97438 * 8 6 5 11 11 H 1.48504 * 109.47017 * 0.02562 * 10 8 6 12 12 H 1.48504 * 109.46698 * 120.00102 * 10 8 6 13 13 H 1.48498 * 109.47365 * 240.00238 * 10 8 6 14 14 C 1.34770 * 119.99938 * 94.82471 * 4 3 2 15 15 O 1.21361 * 120.00460 * 354.62508 * 14 4 3 16 16 C 1.49352 * 120.00293 * 174.62468 * 14 4 3 17 17 O 1.21379 * 119.99835 * 0.17140 * 16 14 4 18 18 N 1.34777 * 120.00585 * 180.17598 * 16 14 4 19 19 C 1.39743 * 120.00221 * 184.94012 * 18 16 14 20 20 C 1.38958 * 120.48832 * 326.64483 * 19 18 16 21 21 N 1.31775 * 120.68107 * 180.02562 * 20 19 18 22 22 C 1.31880 * 121.81952 * 359.97438 * 21 20 19 23 23 C 1.38363 * 120.91254 * 0.02562 * 22 21 20 24 24 Cl 1.73599 * 120.39408 * 180.02562 * 23 22 21 25 25 C 1.38639 * 119.21635 * 0.02562 * 23 22 21 26 26 C 1.50704 * 120.82831 * 180.25080 * 25 23 22 27 27 H 1.08001 * 120.00120 * 0.02562 * 1 2 3 28 28 H 1.08003 * 119.99580 * 180.02562 * 1 2 3 29 29 H 1.08001 * 120.00224 * 179.97438 * 2 1 3 30 30 H 1.09009 * 109.46817 * 4.99564 * 3 2 1 31 31 H 1.08996 * 109.47219 * 245.00100 * 3 2 1 32 32 H 1.08998 * 109.47370 * 23.66750 * 5 4 3 33 33 H 1.08995 * 109.47179 * 143.66670 * 5 4 3 34 34 H 0.97002 * 119.99727 * 179.97438 * 9 8 6 35 35 H 0.97004 * 119.99620 * 4.93602 * 18 16 14 36 36 H 1.08000 * 119.65923 * 0.02562 * 20 19 18 37 37 H 1.07997 * 119.54496 * 179.97438 * 22 21 20 38 38 H 1.08992 * 109.47529 * 269.72595 * 26 25 23 39 39 H 1.09006 * 109.46592 * 29.72320 * 26 25 23 40 40 H 1.09001 * 109.47033 * 149.71917 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3050 0.0000 4 7 2.9938 1.3320 1.1314 5 6 2.5294 1.7659 2.4514 6 6 2.8597 3.2233 2.6461 7 1 3.3654 3.7714 1.8649 8 6 2.5163 3.8569 3.8214 9 7 1.9010 3.1893 4.7729 10 14 2.9264 5.6633 4.0630 11 1 3.6146 6.1808 2.8531 12 1 1.6740 6.4297 4.2855 13 1 3.8160 5.8156 5.2422 14 6 4.2767 0.9575 0.9580 15 8 4.6382 0.5059 -0.1089 16 6 5.2538 1.0982 2.0788 17 8 4.8917 1.5469 3.1469 18 7 6.5377 0.7270 1.9043 19 6 7.4275 0.7612 2.9813 20 6 7.3029 1.7315 3.9681 21 7 8.1402 1.7677 4.9851 22 6 9.1209 0.8948 5.1096 23 6 9.3099 -0.1011 4.1679 24 17 10.6050 -1.2435 4.3456 25 6 8.4529 -0.1760 3.0808 26 6 8.6220 -1.2493 2.0365 27 1 -0.5400 0.9353 -0.0004 28 1 -0.5399 -0.9354 0.0004 29 1 1.8500 -0.9353 0.0004 30 1 1.3585 2.1316 0.0895 31 1 2.6213 1.4025 -0.9313 32 1 1.4508 1.6253 2.5214 33 1 3.0235 1.1751 3.2227 34 1 1.6598 3.6351 5.6000 35 1 6.8440 0.4360 1.0311 36 1 6.5117 2.4636 3.9010 37 1 9.7862 0.9588 5.9580 38 1 9.2825 -0.8884 1.2481 39 1 9.0559 -2.1377 2.4956 40 1 7.6500 -1.4983 1.6106 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000296831514.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:39:19 Heat of formation + Delta-G solvation = 1.553654 kcal Electronic energy + Delta-G solvation = -26863.233073 eV Core-core repulsion = 22898.578208 eV Total energy + Delta-G solvation = -3964.654865 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.09031 -39.84503 -38.10974 -36.78215 -36.11878 -35.17394 -33.46541 -33.03920 -32.13117 -30.14665 -28.03329 -27.61337 -26.51539 -24.44779 -23.18006 -22.53949 -21.76215 -20.10949 -19.36270 -17.83711 -17.26123 -16.67485 -16.50835 -16.45587 -15.91887 -15.38414 -15.07787 -14.78269 -14.64585 -14.46089 -14.23309 -13.69200 -13.32562 -13.05322 -13.02634 -12.97818 -12.71536 -12.33828 -12.11142 -12.06707 -11.67609 -11.55314 -11.37059 -11.22278 -10.97196 -10.85266 -10.76552 -10.54755 -10.07522 -9.75148 -9.63032 -9.29380 -9.22059 -8.81110 -8.39504 -8.28213 -7.97783 -6.07360 -4.10377 0.87298 0.96879 1.81885 1.98730 2.35102 2.81511 3.28745 3.37677 3.39223 3.55470 3.78447 3.98238 4.41444 4.44657 4.50138 4.61913 4.80010 4.94172 5.13867 5.21935 5.29789 5.33544 5.40109 5.47489 5.61175 5.74195 5.84715 5.96591 6.02484 6.14318 6.17102 6.51221 6.71074 6.80295 6.93241 7.15704 7.29972 7.37463 7.79704 7.87470 7.97149 8.10731 8.17329 8.49892 8.89534 9.52989 11.01488 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.010940 B = 0.003988 C = 0.003093 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2558.906175 B = 7018.727453 C = 9050.566044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.160 4.160 3 C 0.140 3.860 4 N -0.552 5.552 5 C 0.229 3.771 6 C -0.518 4.518 7 H 0.055 0.945 8 C 0.072 3.928 9 N -0.887 5.887 10 Si 0.891 3.109 11 H -0.274 1.274 12 H -0.284 1.284 13 H -0.281 1.281 14 C 0.510 3.490 15 O -0.558 6.558 16 C 0.489 3.511 17 O -0.423 6.423 18 N -0.655 5.655 19 C 0.119 3.881 20 C 0.109 3.891 21 N -0.450 5.450 22 C 0.092 3.908 23 C -0.076 4.076 24 Cl -0.058 7.058 25 C -0.068 4.068 26 C -0.120 4.120 27 H 0.099 0.901 28 H 0.095 0.905 29 H 0.106 0.894 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.035 0.965 33 H 0.064 0.936 34 H 0.262 0.738 35 H 0.419 0.581 36 H 0.187 0.813 37 H 0.163 0.837 38 H 0.082 0.918 39 H 0.081 0.919 40 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.703 -8.614 -5.506 14.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.180 4.180 3 C 0.017 3.983 4 N -0.282 5.282 5 C 0.110 3.890 6 C -0.557 4.557 7 H 0.073 0.927 8 C -0.131 4.131 9 N -0.526 5.526 10 Si 0.719 3.281 11 H -0.199 1.199 12 H -0.211 1.211 13 H -0.207 1.207 14 C 0.292 3.708 15 O -0.440 6.440 16 C 0.270 3.730 17 O -0.289 6.289 18 N -0.304 5.304 19 C 0.021 3.979 20 C -0.051 4.051 21 N -0.159 5.159 22 C -0.066 4.066 23 C -0.105 4.105 24 Cl -0.029 7.029 25 C -0.079 4.079 26 C -0.177 4.177 27 H 0.117 0.883 28 H 0.113 0.887 29 H 0.124 0.876 30 H 0.108 0.892 31 H 0.105 0.895 32 H 0.053 0.947 33 H 0.082 0.918 34 H 0.072 0.928 35 H 0.257 0.743 36 H 0.204 0.796 37 H 0.180 0.820 38 H 0.100 0.900 39 H 0.099 0.901 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 10.397 -7.915 -4.439 13.800 hybrid contribution 0.516 0.095 -0.663 0.846 sum 10.912 -7.820 -5.102 14.362 Atomic orbital electron populations 1.23814 0.95729 1.01811 1.00821 1.23277 0.96123 0.98929 0.99625 1.20627 0.92202 0.95474 0.89947 1.48284 1.07037 1.59388 1.13442 1.19972 0.96013 0.96435 0.76544 1.21205 1.38840 0.94116 1.01540 0.92669 1.24788 0.94823 0.98025 0.95493 1.69918 1.40073 1.36250 1.06330 0.86557 0.78126 0.85092 0.78329 1.19904 1.21052 1.20703 1.19602 0.83875 0.80141 0.87224 1.90666 1.78944 1.46886 1.27500 1.20539 0.82437 0.79949 0.90026 1.91002 1.76205 1.35897 1.25797 1.43174 1.08566 1.66845 1.11823 1.18604 0.91889 0.95374 0.92033 1.23553 0.97034 0.95898 0.88615 1.67967 1.02775 1.23551 1.21617 1.22778 0.95868 0.90188 0.97794 1.21737 0.94233 0.96304 0.98237 1.98354 1.47769 1.59503 1.97319 1.19963 0.95211 0.96133 0.96545 1.20834 1.03547 0.96465 0.96858 0.88266 0.88659 0.87622 0.89239 0.89518 0.94708 0.91803 0.92788 0.74326 0.79645 0.81972 0.89967 0.90056 0.90457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.44 14.32 29.01 0.42 -2.03 16 2 C -0.16 -2.42 9.84 -36.03 -0.35 -2.78 16 3 C 0.14 2.37 5.83 -5.20 -0.03 2.34 16 4 N -0.55 -11.09 2.46 -176.99 -0.44 -11.53 16 5 C 0.23 5.44 4.78 -5.19 -0.02 5.42 16 6 C -0.52 -13.49 7.78 -34.44 -0.27 -13.75 16 7 H 0.06 1.45 7.81 -52.48 -0.41 1.04 16 8 C 0.07 1.93 5.46 -17.82 -0.10 1.84 16 9 N -0.89 -25.10 13.29 55.43 0.74 -24.37 16 10 Si 0.89 21.13 29.54 -169.99 -5.02 16.11 16 11 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 12 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 13 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 14 C 0.51 9.87 7.67 -11.63 -0.09 9.78 16 15 O -0.56 -10.65 16.04 5.49 0.09 -10.56 16 16 C 0.49 9.20 7.58 -11.63 -0.09 9.11 16 17 O -0.42 -9.35 9.46 5.47 0.05 -9.30 16 18 N -0.65 -9.86 4.82 -10.20 -0.05 -9.90 16 19 C 0.12 1.79 6.33 -83.60 -0.53 1.26 16 20 C 0.11 1.86 9.89 -17.31 -0.17 1.69 16 21 N -0.45 -7.34 10.35 -13.04 -0.14 -7.48 16 22 C 0.09 1.21 10.98 -17.48 -0.19 1.02 16 23 C -0.08 -0.92 6.34 -39.39 -0.25 -1.17 16 24 Cl -0.06 -0.58 27.47 -51.86 -1.42 -2.01 16 25 C -0.07 -0.85 5.94 -104.09 -0.62 -1.46 16 26 C -0.12 -1.15 9.18 36.01 0.33 -0.82 16 27 H 0.10 1.27 7.84 -52.49 -0.41 0.86 16 28 H 0.10 1.09 8.06 -52.48 -0.42 0.67 16 29 H 0.11 1.59 8.06 -52.49 -0.42 1.17 16 30 H 0.09 1.49 7.76 -51.92 -0.40 1.08 16 31 H 0.09 1.41 7.36 -51.93 -0.38 1.02 16 32 H 0.03 0.87 8.02 -51.93 -0.42 0.45 16 33 H 0.06 1.66 5.84 -51.93 -0.30 1.36 16 34 H 0.26 7.10 8.31 -40.82 -0.34 6.77 16 35 H 0.42 5.34 7.39 -40.82 -0.30 5.04 16 36 H 0.19 3.62 6.09 -52.49 -0.32 3.30 16 37 H 0.16 1.69 8.06 -52.49 -0.42 1.27 16 38 H 0.08 0.66 8.14 -51.93 -0.42 0.23 16 39 H 0.08 0.72 7.02 -51.93 -0.36 0.35 16 40 H 0.08 0.74 7.28 -51.93 -0.38 0.36 16 LS Contribution 359.72 15.07 5.42 5.42 Total: -1.00 -29.58 359.72 -7.25 -36.83 By element: Atomic # 1 Polarization: 10.87 SS G_CDS: -4.52 Total: 6.36 kcal Atomic # 6 Polarization: 12.40 SS G_CDS: -1.97 Total: 10.43 kcal Atomic # 7 Polarization: -53.40 SS G_CDS: 0.12 Total: -53.28 kcal Atomic # 8 Polarization: -20.00 SS G_CDS: 0.14 Total: -19.86 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.02 Total: 16.11 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.42 Total: -2.01 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -29.58 -7.25 -36.83 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000296831514.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.386 kcal (2) G-P(sol) polarization free energy of solvation -29.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.832 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.554 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds