Wall clock time and date at job start Tue Mar 31 2020 20:29:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46757 * 124.35079 * 2 1 4 4 C 1.54479 * 105.47505 * 197.01654 * 3 2 1 5 5 C 1.54625 * 101.76724 * 334.58572 * 4 3 2 6 6 H 1.08999 * 110.48324 * 265.98855 * 5 4 3 7 7 N 1.46501 * 110.48815 * 143.47317 * 5 4 3 8 8 C 1.34780 * 119.99848 * 155.00176 * 7 5 4 9 9 O 1.21575 * 120.00156 * 359.97438 * 8 7 5 10 10 N 1.34773 * 119.99843 * 179.97438 * 8 7 5 11 11 C 1.39272 * 120.00231 * 174.31306 * 10 8 7 12 12 C 1.39467 * 119.83893 * 335.10595 * 11 10 8 13 13 C 1.36371 * 120.18165 * 179.97438 * 12 11 10 14 14 C 1.40890 * 119.84870 * 359.97438 * 13 12 11 15 15 C 1.41158 * 120.15722 * 179.97438 * 14 13 12 16 16 H 1.07993 * 120.00198 * 34.91996 * 15 14 13 17 17 C 1.39886 * 119.99585 * 214.91935 * 15 14 13 18 18 N 1.30879 * 120.00596 * 355.22888 * 17 15 14 19 19 Si 1.86804 * 119.99602 * 175.23148 * 17 15 14 20 20 H 1.48495 * 109.47193 * 90.00280 * 19 17 15 21 21 H 1.48507 * 109.47165 * 209.99736 * 19 17 15 22 22 H 1.48499 * 109.47143 * 330.00028 * 19 17 15 23 23 C 1.40845 * 119.68315 * 0.02562 * 14 13 12 24 24 C 1.36474 * 119.81788 * 359.73498 * 23 14 13 25 25 Cl 1.73597 * 119.92879 * 180.25109 * 24 23 14 26 26 C 1.34421 * 124.34803 * 180.02562 * 2 1 3 27 27 O 1.21280 * 124.94351 * 359.63033 * 26 2 1 28 28 H 1.08993 * 109.47389 * 90.00097 * 1 2 3 29 29 H 1.09007 * 109.47163 * 209.99735 * 1 2 3 30 30 H 1.09002 * 109.47350 * 329.99571 * 1 2 3 31 31 H 1.08997 * 110.24687 * 78.01933 * 3 2 1 32 32 H 1.08998 * 110.24862 * 316.02218 * 3 2 1 33 33 H 1.09004 * 110.96576 * 92.70620 * 4 3 2 34 34 H 1.08999 * 110.97233 * 216.42650 * 4 3 2 35 35 H 0.96998 * 119.99981 * 335.00196 * 7 5 4 36 36 H 0.97007 * 120.00160 * 354.31919 * 10 8 7 37 37 H 1.08002 * 119.90714 * 359.97438 * 12 11 10 38 38 H 1.08002 * 120.07664 * 180.02562 * 13 12 11 39 39 H 0.96999 * 120.00639 * 179.97438 * 18 17 15 40 40 H 1.07998 * 120.08680 * 179.97438 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2930 1.2116 0.0000 4 6 3.7009 0.7486 -0.4357 5 6 3.6898 -0.7379 -0.0102 6 1 4.1215 -0.8533 0.9840 7 7 4.4193 -1.5552 -0.9828 8 6 4.9669 -2.7266 -0.6028 9 8 4.8557 -3.1049 0.5472 10 7 5.6376 -3.4787 -1.4977 11 6 6.3036 -4.6286 -1.0809 12 6 6.7285 -4.7433 0.2425 13 6 7.3809 -5.8663 0.6583 14 6 7.6252 -6.9131 -0.2525 15 6 8.3003 -8.0783 0.1707 16 1 8.1496 -8.4565 1.1710 17 6 9.1646 -8.7430 -0.7056 18 7 9.2762 -8.3402 -1.9459 19 14 10.1594 -10.2059 -0.1056 20 1 9.3833 -11.4536 -0.3197 21 1 11.4352 -10.2807 -0.8620 22 1 10.4507 -10.0462 1.3418 23 6 7.1934 -6.7910 -1.5876 24 6 6.5374 -5.6633 -1.9882 25 17 5.9983 -5.5125 -3.6314 26 6 2.2234 -1.1098 -0.0005 27 8 1.7945 -2.2443 0.0054 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3634 -0.8901 0.5138 30 1 -0.3634 0.8899 0.5139 31 1 2.3306 1.6428 1.0003 32 1 1.8984 1.9383 -0.7101 33 1 3.8268 0.8448 -1.5142 34 1 4.4754 1.3014 0.0961 35 1 4.5083 -1.2532 -1.9003 36 1 5.6565 -3.2191 -2.4322 37 1 6.5404 -3.9404 0.9399 38 1 7.7088 -5.9535 1.6836 39 1 9.8758 -8.8010 -2.5534 40 1 7.3776 -7.5892 -2.2914 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455700330.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:29:00 Heat of formation + Delta-G solvation = -33.056114 kcal Electronic energy + Delta-G solvation = -26119.256603 eV Core-core repulsion = 22153.100945 eV Total energy + Delta-G solvation = -3966.155658 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -40.90744 -39.64491 -37.58809 -36.56764 -35.47244 -34.90786 -34.26005 -33.00227 -31.58780 -29.38644 -28.90977 -27.41614 -26.62595 -24.85763 -22.39280 -21.87128 -21.09718 -20.27858 -19.66162 -18.18856 -17.39803 -17.24642 -16.83359 -16.42990 -15.71679 -15.25563 -15.03670 -14.61236 -14.26647 -14.13644 -13.96046 -13.74459 -13.31584 -13.13327 -12.90192 -12.84460 -12.55002 -12.41726 -12.32173 -12.23778 -11.64770 -11.46486 -11.33173 -11.09337 -10.91458 -10.55005 -10.33170 -10.31167 -10.05004 -9.90988 -9.50151 -9.27855 -8.98809 -8.87236 -8.84493 -7.48458 -6.88242 -6.65345 -4.37762 2.29500 2.50768 2.69660 2.90988 3.04470 3.10199 3.10875 3.16525 3.24384 3.63740 3.96815 4.04475 4.16779 4.42772 4.55751 4.62588 4.64784 4.94318 5.02247 5.08371 5.28100 5.37367 5.44770 5.52235 5.55560 6.19315 6.20325 6.38833 6.53942 6.67060 6.83194 6.91256 7.02506 7.15301 7.28064 7.41218 7.72365 7.75979 7.98862 8.05652 8.17670 8.38327 8.50851 8.82071 8.87323 9.00885 10.25769 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.024051 B = 0.002559 C = 0.002450 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1163.898460 B =10940.867041 C =11427.170008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.631 5.631 3 C 0.106 3.894 4 C -0.138 4.138 5 C 0.139 3.861 6 H 0.128 0.872 7 N -0.734 5.734 8 C 0.703 3.297 9 O -0.566 6.566 10 N -0.662 5.662 11 C 0.041 3.959 12 C -0.087 4.087 13 C -0.196 4.196 14 C 0.103 3.897 15 C -0.457 4.457 16 H 0.080 0.920 17 C 0.069 3.931 18 N -0.809 5.809 19 Si 0.917 3.083 20 H -0.270 1.270 21 H -0.278 1.278 22 H -0.263 1.263 23 C -0.131 4.131 24 C -0.029 4.029 25 Cl -0.122 7.122 26 C 0.499 3.501 27 O -0.501 6.501 28 H 0.054 0.946 29 H 0.075 0.925 30 H 0.070 0.930 31 H 0.075 0.925 32 H 0.081 0.919 33 H 0.089 0.911 34 H 0.101 0.899 35 H 0.397 0.603 36 H 0.395 0.605 37 H 0.127 0.873 38 H 0.103 0.897 39 H 0.280 0.720 40 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.627 19.837 -1.199 22.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.045 4.045 2 N -0.369 5.369 3 C -0.017 4.017 4 C -0.176 4.176 5 C 0.028 3.972 6 H 0.145 0.855 7 N -0.391 5.391 8 C 0.403 3.597 9 O -0.442 6.442 10 N -0.308 5.308 11 C -0.053 4.053 12 C -0.108 4.108 13 C -0.216 4.216 14 C 0.100 3.900 15 C -0.488 4.488 16 H 0.098 0.902 17 C -0.146 4.146 18 N -0.436 5.436 19 Si 0.742 3.258 20 H -0.195 1.195 21 H -0.203 1.203 22 H -0.187 1.187 23 C -0.152 4.152 24 C -0.057 4.057 25 Cl -0.093 7.093 26 C 0.283 3.717 27 O -0.373 6.373 28 H 0.073 0.927 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.094 0.906 32 H 0.099 0.901 33 H 0.107 0.893 34 H 0.120 0.880 35 H 0.231 0.769 36 H 0.230 0.770 37 H 0.145 0.855 38 H 0.121 0.879 39 H 0.091 0.909 40 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -9.954 18.814 -0.486 21.291 hybrid contribution 0.366 -0.212 -0.998 1.084 sum -9.589 18.602 -1.483 20.981 Atomic orbital electron populations 1.21518 0.78085 1.03095 1.01778 1.48164 1.06429 1.07353 1.74908 1.22054 0.89933 0.87590 1.02156 1.22931 0.97267 0.94122 1.03329 1.21325 0.89616 0.89760 0.96476 0.85458 1.44802 1.59278 1.21952 1.13057 1.15818 0.78314 0.80142 0.85380 1.90886 1.63885 1.71366 1.18033 1.42039 1.52993 1.25425 1.10319 1.16759 1.07032 0.87123 0.94377 1.20547 0.97664 0.99215 0.93331 1.20931 1.06560 0.94260 0.99817 1.17597 0.89491 0.92461 0.90499 1.19464 1.21886 1.07767 0.99646 0.90225 1.25898 0.96863 0.97560 0.94305 1.69740 1.31979 1.37315 1.04543 0.86163 0.78961 0.80816 0.79867 1.19477 1.20280 1.18672 1.21195 0.99195 0.96233 0.98560 1.20357 1.06051 0.96710 0.82628 1.98244 1.89908 1.97936 1.23259 1.21485 0.89745 0.84588 0.75853 1.90781 1.78111 1.20957 1.47485 0.92705 0.90671 0.91098 0.90645 0.90069 0.89252 0.88039 0.76915 0.77032 0.85540 0.87898 0.90937 0.83793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.73 10.96 59.84 0.66 1.39 16 2 N -0.63 -5.87 3.33 -180.30 -0.60 -6.47 16 3 C 0.11 0.54 7.35 -3.13 -0.02 0.52 16 4 C -0.14 -0.76 6.87 -25.10 -0.17 -0.93 16 5 C 0.14 1.55 3.29 -67.94 -0.22 1.33 16 6 H 0.13 1.58 7.55 -51.93 -0.39 1.19 16 7 N -0.73 -9.52 5.13 -58.69 -0.30 -9.83 16 8 C 0.70 12.97 8.35 -86.92 -0.73 12.24 16 9 O -0.57 -12.70 13.12 5.30 0.07 -12.63 16 10 N -0.66 -12.47 5.17 -14.07 -0.07 -12.54 16 11 C 0.04 0.95 6.44 -83.52 -0.54 0.41 16 12 C -0.09 -2.09 8.63 -39.80 -0.34 -2.44 16 13 C -0.20 -4.88 9.74 -39.25 -0.38 -5.27 16 14 C 0.10 2.73 5.55 -106.80 -0.59 2.14 16 15 C -0.46 -12.04 9.02 -37.86 -0.34 -12.38 16 16 H 0.08 2.02 7.85 -52.49 -0.41 1.60 16 17 C 0.07 1.73 5.42 -17.34 -0.09 1.64 16 18 N -0.81 -20.78 10.59 55.54 0.59 -20.19 16 19 Si 0.92 18.85 29.56 -169.99 -5.03 13.83 16 20 H -0.27 -5.48 7.11 56.52 0.40 -5.07 16 21 H -0.28 -5.60 7.11 56.52 0.40 -5.20 16 22 H -0.26 -5.35 7.11 56.52 0.40 -4.95 16 23 C -0.13 -3.41 8.38 -39.23 -0.33 -3.74 16 24 C -0.03 -0.68 6.30 -39.72 -0.25 -0.93 16 25 Cl -0.12 -2.42 27.75 -51.86 -1.44 -3.86 16 26 C 0.50 6.87 7.66 -10.86 -0.08 6.78 16 27 O -0.50 -9.73 17.58 5.56 0.10 -9.63 16 28 H 0.05 0.37 8.14 -51.93 -0.42 -0.05 16 29 H 0.07 0.70 7.92 -51.92 -0.41 0.28 16 30 H 0.07 0.33 8.14 -51.93 -0.42 -0.10 16 31 H 0.08 0.29 8.14 -51.93 -0.42 -0.13 16 32 H 0.08 0.25 8.14 -51.93 -0.42 -0.17 16 33 H 0.09 0.39 7.82 -51.93 -0.41 -0.02 16 34 H 0.10 0.38 8.14 -51.93 -0.42 -0.05 16 35 H 0.40 3.82 8.45 -40.82 -0.34 3.47 16 36 H 0.40 6.33 7.75 -40.82 -0.32 6.01 16 37 H 0.13 2.99 5.76 -52.49 -0.30 2.68 16 38 H 0.10 2.41 8.06 -52.49 -0.42 1.98 16 39 H 0.28 6.59 8.30 -40.82 -0.34 6.25 16 40 H 0.14 3.90 6.13 -52.49 -0.32 3.57 16 LS Contribution 353.83 15.07 5.33 5.33 Total: -1.00 -34.52 353.83 -9.37 -43.89 By element: Atomic # 1 Polarization: 15.90 SS G_CDS: -4.58 Total: 11.32 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: -3.44 Total: 0.76 kcal Atomic # 7 Polarization: -48.64 SS G_CDS: -0.39 Total: -49.02 kcal Atomic # 8 Polarization: -22.43 SS G_CDS: 0.17 Total: -22.26 kcal Atomic # 14 Polarization: 18.85 SS G_CDS: -5.03 Total: 13.83 kcal Atomic # 17 Polarization: -2.42 SS G_CDS: -1.44 Total: -3.86 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -34.52 -9.37 -43.89 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455700330.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.838 kcal (2) G-P(sol) polarization free energy of solvation -34.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds