Wall clock time and date at job start Tue Mar 31 2020 20:29:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46765 * 124.35007 * 2 1 4 4 C 1.54489 * 105.47187 * 197.03673 * 3 2 1 5 5 H 1.08998 * 111.00287 * 92.71642 * 4 3 2 6 6 N 1.46504 * 110.96673 * 216.46640 * 4 3 2 7 7 C 1.34773 * 119.99603 * 198.83160 * 6 4 3 8 8 O 1.21585 * 120.00364 * 359.97438 * 7 6 4 9 9 N 1.34776 * 119.99922 * 179.97438 * 7 6 4 10 10 C 1.39273 * 119.99995 * 185.56209 * 9 7 6 11 11 C 1.39465 * 119.83938 * 21.69823 * 10 9 7 12 12 C 1.36376 * 120.17901 * 179.97438 * 11 10 9 13 13 C 1.40890 * 119.85168 * 359.97438 * 12 11 10 14 14 C 1.41149 * 120.16075 * 179.97438 * 13 12 11 15 15 H 1.08007 * 119.99933 * 330.57752 * 14 13 12 16 16 C 1.39891 * 120.00363 * 150.56923 * 14 13 12 17 17 N 1.30882 * 120.00132 * 162.79433 * 16 14 13 18 18 Si 1.86797 * 119.99725 * 342.80035 * 16 14 13 19 19 H 1.48504 * 109.47474 * 90.70144 * 18 16 14 20 20 H 1.48497 * 109.47200 * 210.70358 * 18 16 14 21 21 H 1.48501 * 109.47433 * 330.70083 * 18 16 14 22 22 C 1.40842 * 119.68037 * 359.97438 * 13 12 11 23 23 C 1.36473 * 119.82155 * 0.02562 * 22 13 12 24 24 Cl 1.73593 * 119.92865 * 179.97438 * 23 22 13 25 25 C 1.54633 * 101.76434 * 334.58153 * 4 3 2 26 26 C 1.34418 * 124.35078 * 180.02562 * 2 1 3 27 27 O 1.21287 * 124.93951 * 359.60796 * 26 2 1 28 28 H 1.08991 * 109.47079 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47123 * 300.00276 * 1 2 3 30 30 H 1.09001 * 109.47133 * 60.00001 * 1 2 3 31 31 H 1.08999 * 110.24890 * 78.03937 * 3 2 1 32 32 H 1.08994 * 110.24958 * 316.03527 * 3 2 1 33 33 H 0.96994 * 120.00358 * 18.83306 * 6 4 3 34 34 H 0.97002 * 119.99883 * 5.56976 * 9 7 6 35 35 H 1.07996 * 119.91221 * 359.97438 * 11 10 9 36 36 H 1.08002 * 120.07506 * 179.72688 * 12 11 10 37 37 H 0.97001 * 119.99670 * 180.02562 * 17 16 14 38 38 H 1.08000 * 120.08832 * 180.02562 * 22 13 12 39 39 H 1.09000 * 110.48570 * 143.47518 * 25 4 3 40 40 H 1.08996 * 110.48605 * 266.12147 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2931 1.2117 0.0000 4 6 3.7009 0.7487 -0.4362 5 1 3.8272 0.8450 -1.5146 6 7 4.7419 1.4909 0.2792 7 6 5.9994 1.5237 -0.2048 8 8 6.2699 0.9370 -1.2348 9 7 6.9570 2.2069 0.4530 10 6 8.2264 2.3383 -0.1047 11 6 8.3996 2.1836 -1.4799 12 6 9.6395 2.3113 -2.0333 13 6 10.7474 2.6007 -1.2125 14 6 12.0337 2.7337 -1.7784 15 1 12.2891 2.1859 -2.6735 16 6 12.9776 3.5750 -1.1800 17 7 14.2456 3.4547 -1.4811 18 14 12.4282 4.8701 0.0490 19 1 12.4592 4.2973 1.4188 20 1 13.3431 6.0377 -0.0201 21 1 11.0456 5.3048 -0.2746 22 6 10.5654 2.7567 0.1753 23 6 9.3188 2.6261 0.7152 24 17 9.0913 2.8172 2.4255 25 6 3.6898 -0.7379 -0.0108 26 6 2.2234 -1.1098 -0.0005 27 8 1.7946 -2.2442 0.0058 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 2.3310 1.6427 1.0004 32 1 1.8983 1.9384 -0.7099 33 1 4.5263 1.9586 1.1010 34 1 6.7621 2.6071 1.3149 35 1 7.5496 1.9622 -2.1082 36 1 9.7724 2.1869 -3.0979 37 1 14.9001 4.0379 -1.0659 38 1 11.4100 2.9790 0.8106 39 1 4.2324 -1.3459 -0.7348 40 1 4.1197 -0.8532 0.9841 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455710942.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:29:56 Heat of formation + Delta-G solvation = -33.351232 kcal Electronic energy + Delta-G solvation = -25899.845744 eV Core-core repulsion = 21933.677290 eV Total energy + Delta-G solvation = -3966.168455 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.99352 -40.01857 -38.05888 -36.85752 -35.83425 -34.87313 -34.44399 -33.28383 -31.63184 -29.83568 -29.51838 -27.90914 -26.70743 -24.96122 -22.67312 -21.99601 -21.04163 -20.62342 -19.89804 -18.46365 -17.56807 -17.42718 -16.89848 -16.70851 -15.87826 -15.47417 -15.32236 -14.81508 -14.43764 -14.33814 -14.10965 -13.87086 -13.69010 -13.59699 -13.12247 -12.93581 -12.83459 -12.68080 -12.64995 -12.55815 -12.09032 -11.55682 -11.41638 -11.04182 -10.94951 -10.75888 -10.66887 -10.32140 -10.23054 -9.93293 -9.83507 -9.34413 -9.23754 -9.17313 -9.06826 -7.84707 -7.25625 -7.06870 -4.55114 2.18079 2.26751 2.40550 2.49469 2.75306 2.86475 3.02928 3.11999 3.22063 3.37166 3.88324 3.92613 4.11732 4.30389 4.36216 4.56008 4.57608 4.89112 4.95279 4.99633 5.18197 5.24824 5.31507 5.52574 5.63049 5.82531 6.03891 6.19220 6.23968 6.40754 6.51086 6.63450 6.66726 6.79675 6.97273 7.13896 7.31044 7.45697 7.63938 7.81158 7.92817 8.12927 8.19019 8.44405 8.64614 8.73635 9.94623 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.025743 B = 0.002511 C = 0.002397 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1087.417071 B =11150.199385 C =11678.347759 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.625 5.625 3 C 0.099 3.901 4 C 0.160 3.840 5 H 0.114 0.886 6 N -0.741 5.741 7 C 0.701 3.299 8 O -0.570 6.570 9 N -0.661 5.661 10 C 0.025 3.975 11 C -0.074 4.074 12 C -0.190 4.190 13 C 0.091 3.909 14 C -0.434 4.434 15 H 0.096 0.904 16 C 0.082 3.918 17 N -0.799 5.799 18 Si 0.909 3.091 19 H -0.265 1.265 20 H -0.289 1.289 21 H -0.244 1.244 22 C -0.226 4.226 23 C 0.001 3.999 24 Cl -0.116 7.116 25 C -0.170 4.170 26 C 0.522 3.478 27 O -0.530 6.530 28 H 0.083 0.917 29 H 0.061 0.939 30 H 0.063 0.937 31 H 0.078 0.922 32 H 0.090 0.910 33 H 0.396 0.604 34 H 0.397 0.603 35 H 0.139 0.861 36 H 0.110 0.890 37 H 0.288 0.712 38 H 0.117 0.883 39 H 0.112 0.888 40 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.955 1.487 6.010 21.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.361 5.361 3 C -0.025 4.025 4 C 0.053 3.947 5 H 0.132 0.868 6 N -0.398 5.398 7 C 0.402 3.598 8 O -0.447 6.447 9 N -0.307 5.307 10 C -0.069 4.069 11 C -0.094 4.094 12 C -0.210 4.210 13 C 0.087 3.913 14 C -0.462 4.462 15 H 0.114 0.886 16 C -0.138 4.138 17 N -0.423 5.423 18 Si 0.735 3.265 19 H -0.191 1.191 20 H -0.217 1.217 21 H -0.168 1.168 22 C -0.247 4.247 23 C -0.028 4.028 24 Cl -0.088 7.088 25 C -0.211 4.211 26 C 0.309 3.691 27 O -0.406 6.406 28 H 0.102 0.898 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.108 0.892 33 H 0.231 0.769 34 H 0.232 0.768 35 H 0.156 0.844 36 H 0.128 0.872 37 H 0.098 0.902 38 H 0.135 0.865 39 H 0.130 0.870 40 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -20.767 0.426 5.177 21.407 hybrid contribution -0.200 1.107 1.717 2.053 sum -20.967 1.533 6.894 22.124 Atomic orbital electron populations 1.21581 0.77776 1.03912 1.01616 1.48138 1.06622 1.07020 1.74279 1.22273 0.89945 0.87657 1.02606 1.21485 0.85130 0.89503 0.98609 0.86838 1.44989 1.07921 1.57572 1.29330 1.15816 0.80218 0.79886 0.83903 1.90874 1.80385 1.48747 1.24694 1.42029 1.10017 1.55412 1.23196 1.16619 0.81429 1.16982 0.91860 1.20822 0.98613 0.98159 0.91827 1.20853 0.91623 1.09708 0.98799 1.17669 0.93547 0.90104 0.89962 1.19473 0.93525 1.22378 1.10850 0.88622 1.26216 0.94001 0.97973 0.95607 1.69704 1.01955 1.33593 1.37028 0.86371 0.80499 0.79210 0.80377 1.19056 1.21664 1.16753 1.20608 0.94313 1.14092 0.95656 1.20097 0.94265 1.07620 0.80815 1.98265 1.97348 1.96490 1.16665 1.22898 0.94110 0.98328 1.05787 1.20945 0.89182 0.84287 0.74637 1.90733 1.78599 1.21114 1.50169 0.89789 0.92001 0.91863 0.90436 0.89208 0.76909 0.76849 0.84400 0.87189 0.90186 0.86506 0.86973 0.87256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.54 11.14 59.85 0.67 1.21 16 2 N -0.62 -4.92 3.33 -180.29 -0.60 -5.52 16 3 C 0.10 0.55 7.07 -3.12 -0.02 0.53 16 4 C 0.16 1.33 3.43 -66.29 -0.23 1.10 16 5 H 0.11 1.09 7.72 -51.93 -0.40 0.69 16 6 N -0.74 -6.77 5.19 -57.07 -0.30 -7.07 16 7 C 0.70 10.13 8.38 -86.92 -0.73 9.40 16 8 O -0.57 -10.39 13.04 5.29 0.07 -10.33 16 9 N -0.66 -10.12 5.21 -14.07 -0.07 -10.20 16 10 C 0.03 0.50 6.49 -83.52 -0.54 -0.04 16 11 C -0.07 -1.56 8.68 -39.80 -0.35 -1.91 16 12 C -0.19 -4.27 9.74 -39.25 -0.38 -4.65 16 13 C 0.09 2.21 5.13 -106.80 -0.55 1.66 16 14 C -0.43 -11.22 9.56 -37.86 -0.36 -11.58 16 15 H 0.10 2.58 8.06 -52.48 -0.42 2.15 16 16 C 0.08 2.07 5.42 -17.34 -0.09 1.97 16 17 N -0.80 -20.50 13.93 55.54 0.77 -19.73 16 18 Si 0.91 20.01 24.51 -169.99 -4.17 15.85 16 19 H -0.26 -5.70 6.48 56.52 0.37 -5.34 16 20 H -0.29 -6.13 7.11 56.52 0.40 -5.73 16 21 H -0.24 -5.46 7.00 56.52 0.40 -5.07 16 22 C -0.23 -5.24 6.95 -39.23 -0.27 -5.51 16 23 C 0.00 0.01 6.30 -39.72 -0.25 -0.24 16 24 Cl -0.12 -1.99 27.70 -51.86 -1.44 -3.43 16 25 C -0.17 -1.67 6.59 -26.74 -0.18 -1.84 16 26 C 0.52 5.78 8.02 -10.86 -0.09 5.69 16 27 O -0.53 -8.01 17.35 5.55 0.10 -7.92 16 28 H 0.08 0.60 7.53 -51.93 -0.39 0.21 16 29 H 0.06 0.26 8.14 -51.93 -0.42 -0.17 16 30 H 0.06 0.27 8.14 -51.93 -0.42 -0.15 16 31 H 0.08 0.30 7.77 -51.93 -0.40 -0.10 16 32 H 0.09 0.37 8.14 -51.93 -0.42 -0.06 16 33 H 0.40 2.40 8.39 -40.82 -0.34 2.05 16 34 H 0.40 5.00 7.66 -40.82 -0.31 4.68 16 35 H 0.14 2.84 5.52 -52.49 -0.29 2.55 16 36 H 0.11 2.33 8.06 -52.49 -0.42 1.91 16 37 H 0.29 6.67 8.30 -40.82 -0.34 6.33 16 38 H 0.12 2.74 4.45 -52.49 -0.23 2.51 16 39 H 0.11 1.25 8.14 -51.93 -0.42 0.83 16 40 H 0.11 1.03 8.08 -51.93 -0.42 0.61 16 LS Contribution 347.84 15.07 5.24 5.24 Total: -1.00 -31.09 347.84 -8.27 -39.35 By element: Atomic # 1 Polarization: 12.44 SS G_CDS: -4.51 Total: 7.94 kcal Atomic # 6 Polarization: -0.82 SS G_CDS: -3.37 Total: -4.19 kcal Atomic # 7 Polarization: -42.32 SS G_CDS: -0.20 Total: -42.51 kcal Atomic # 8 Polarization: -18.41 SS G_CDS: 0.17 Total: -18.24 kcal Atomic # 14 Polarization: 20.01 SS G_CDS: -4.17 Total: 15.85 kcal Atomic # 17 Polarization: -1.99 SS G_CDS: -1.44 Total: -3.43 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -31.09 -8.27 -39.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455710942.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.003 kcal (2) G-P(sol) polarization free energy of solvation -31.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds