Wall clock time and date at job start Tue Mar 31 2020 20:30:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46763 * 124.35130 * 2 1 4 4 C 1.54482 * 105.47416 * 197.03994 * 3 2 1 5 5 H 1.09002 * 110.99691 * 216.45425 * 4 3 2 6 6 N 1.46499 * 110.96853 * 92.70596 * 4 3 2 7 7 C 1.34770 * 119.99809 * 160.89493 * 6 4 3 8 8 O 1.21580 * 119.99965 * 359.97438 * 7 6 4 9 9 N 1.34777 * 119.99801 * 180.02562 * 7 6 4 10 10 C 1.39276 * 119.99946 * 174.44427 * 9 7 6 11 11 C 1.39468 * 119.83851 * 338.70282 * 10 9 7 12 12 C 1.36378 * 120.17900 * 179.97438 * 11 10 9 13 13 C 1.40889 * 119.84761 * 359.97438 * 12 11 10 14 14 C 1.41153 * 120.15801 * 179.97438 * 13 12 11 15 15 H 1.08003 * 120.00027 * 151.11587 * 14 13 12 16 16 C 1.39894 * 119.99916 * 331.12224 * 14 13 12 17 17 N 1.30887 * 119.99753 * 167.24129 * 16 14 13 18 18 Si 1.86797 * 120.00017 * 347.24064 * 16 14 13 19 19 H 1.48502 * 109.47047 * 95.27000 * 18 16 14 20 20 H 1.48499 * 109.47253 * 215.27043 * 18 16 14 21 21 H 1.48500 * 109.47047 * 335.27230 * 18 16 14 22 22 C 1.40844 * 119.68645 * 0.02562 * 13 12 11 23 23 C 1.36477 * 119.81543 * 359.73742 * 22 13 12 24 24 Cl 1.73600 * 119.92567 * 180.25418 * 23 22 13 25 25 C 1.54623 * 101.76347 * 334.58455 * 4 3 2 26 26 C 1.34419 * 124.35020 * 180.02562 * 2 1 3 27 27 O 1.21287 * 124.93940 * 359.60265 * 26 2 1 28 28 H 1.08999 * 109.47300 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47260 * 299.99363 * 1 2 3 30 30 H 1.08999 * 109.47151 * 59.99700 * 1 2 3 31 31 H 1.09000 * 110.24492 * 78.03858 * 3 2 1 32 32 H 1.08997 * 110.24380 * 316.04409 * 3 2 1 33 33 H 0.97003 * 119.99501 * 341.16449 * 6 4 3 34 34 H 0.96999 * 120.00311 * 354.44242 * 9 7 6 35 35 H 1.08000 * 119.90817 * 359.95336 * 11 10 9 36 36 H 1.08000 * 120.07228 * 180.02562 * 12 11 10 37 37 H 0.96998 * 119.99318 * 179.97438 * 17 16 14 38 38 H 1.07994 * 120.08965 * 180.02562 * 22 13 12 39 39 H 1.08996 * 110.48620 * 143.47912 * 25 4 3 40 40 H 1.09002 * 110.48980 * 265.98409 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2931 1.2117 0.0000 4 6 3.7009 0.7487 -0.4363 5 1 4.4758 1.3008 0.0955 6 7 3.8696 0.8783 -1.8858 7 6 5.1063 0.9021 -2.4207 8 8 6.0820 0.8166 -1.7004 9 7 5.2615 1.0218 -3.7542 10 6 6.5364 1.1628 -4.2970 11 6 7.5841 1.6202 -3.4980 12 6 8.8352 1.7604 -4.0223 13 6 9.0687 1.4415 -5.3746 14 6 10.3610 1.5847 -5.9241 15 1 10.6736 0.9513 -6.7411 16 6 11.2368 2.5469 -5.4102 17 7 12.5038 2.5198 -5.7376 18 14 10.5981 3.8703 -4.2569 19 1 10.8120 3.4460 -2.8500 20 1 11.3274 5.1394 -4.5075 21 1 9.1473 4.0775 -4.4964 22 6 8.0063 0.9802 -6.1759 23 6 6.7605 0.8402 -5.6364 24 17 5.4504 0.2655 -6.6197 25 6 3.6898 -0.7378 -0.0111 26 6 2.2235 -1.1098 -0.0005 27 8 1.7945 -2.2443 0.0059 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5137 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 2.3310 1.6427 1.0005 32 1 1.8982 1.9384 -0.7098 33 1 3.0912 0.9508 -2.4600 34 1 4.4854 1.0096 -4.3358 35 1 7.4039 1.8642 -2.4615 36 1 9.6454 2.1143 -3.4019 37 1 13.1110 3.1872 -5.3815 38 1 8.1780 0.7335 -7.2132 39 1 4.2324 -1.3457 -0.7350 40 1 4.1219 -0.8536 0.9829 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455710945.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:30:00 Heat of formation + Delta-G solvation = -32.760703 kcal Electronic energy + Delta-G solvation = -26129.188830 eV Core-core repulsion = 22163.045982 eV Total energy + Delta-G solvation = -3966.142848 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.03814 -39.96205 -38.03768 -36.83905 -35.85595 -34.77671 -34.37682 -33.25604 -31.63861 -29.84825 -29.51560 -27.91592 -26.75342 -25.02660 -22.48281 -22.06309 -21.22518 -20.53016 -19.83094 -18.32742 -17.67519 -17.47941 -16.90008 -16.71453 -15.79312 -15.58257 -15.14760 -14.84006 -14.55485 -14.38653 -13.97517 -13.90033 -13.81281 -13.16700 -13.01661 -12.92331 -12.76288 -12.69324 -12.55295 -12.48687 -12.04844 -11.88711 -11.64331 -11.10970 -11.09907 -10.62089 -10.46984 -10.29344 -10.19048 -9.85885 -9.75185 -9.49655 -9.22751 -9.09856 -9.04399 -7.81901 -7.24884 -7.03857 -4.55054 2.21446 2.29879 2.45484 2.59525 2.66215 2.86198 3.05388 3.16551 3.24717 3.37847 3.90453 3.94536 4.10603 4.28939 4.37284 4.46993 4.76750 4.88679 4.96726 5.03505 5.20449 5.24799 5.32033 5.43642 5.64615 5.85327 6.05628 6.14631 6.25351 6.40846 6.50165 6.66910 6.68942 6.83244 6.91859 7.16581 7.32399 7.42884 7.70522 7.82128 7.84597 8.14410 8.21158 8.43850 8.64759 8.75623 9.97359 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.017525 B = 0.002884 C = 0.002623 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1597.327348 B = 9704.749502 C =10673.796149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.628 5.628 3 C 0.097 3.903 4 C 0.157 3.843 5 H 0.120 0.880 6 N -0.743 5.743 7 C 0.700 3.300 8 O -0.571 6.571 9 N -0.661 5.661 10 C 0.024 3.976 11 C -0.068 4.068 12 C -0.220 4.220 13 C 0.090 3.910 14 C -0.431 4.431 15 H 0.094 0.906 16 C 0.080 3.920 17 N -0.804 5.804 18 Si 0.914 3.086 19 H -0.269 1.269 20 H -0.292 1.292 21 H -0.239 1.239 22 C -0.188 4.188 23 C -0.006 4.006 24 Cl -0.114 7.114 25 C -0.169 4.169 26 C 0.519 3.481 27 O -0.532 6.532 28 H 0.082 0.918 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.395 0.605 34 H 0.397 0.603 35 H 0.138 0.862 36 H 0.106 0.894 37 H 0.288 0.712 38 H 0.116 0.884 39 H 0.110 0.890 40 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.694 2.139 9.489 21.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.364 5.364 3 C -0.027 4.027 4 C 0.051 3.949 5 H 0.138 0.862 6 N -0.400 5.400 7 C 0.401 3.599 8 O -0.448 6.448 9 N -0.306 5.306 10 C -0.070 4.070 11 C -0.088 4.088 12 C -0.240 4.240 13 C 0.086 3.914 14 C -0.459 4.459 15 H 0.112 0.888 16 C -0.139 4.139 17 N -0.427 5.427 18 Si 0.741 3.259 19 H -0.195 1.195 20 H -0.220 1.220 21 H -0.163 1.163 22 C -0.209 4.209 23 C -0.034 4.034 24 Cl -0.086 7.086 25 C -0.211 4.211 26 C 0.307 3.693 27 O -0.408 6.408 28 H 0.101 0.899 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.108 0.892 32 H 0.106 0.894 33 H 0.229 0.771 34 H 0.232 0.768 35 H 0.156 0.844 36 H 0.123 0.877 37 H 0.098 0.902 38 H 0.134 0.866 39 H 0.128 0.872 40 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -18.953 1.493 10.043 21.502 hybrid contribution -1.008 0.554 -0.262 1.180 sum -19.962 2.046 9.782 22.324 Atomic orbital electron populations 1.21564 0.77943 1.03834 1.01526 1.48193 1.06566 1.07294 1.74360 1.22417 0.89770 0.87579 1.02943 1.21579 0.96825 0.95302 0.81238 0.86190 1.45116 1.07014 1.80762 1.07117 1.15846 0.83232 0.78393 0.82473 1.90866 1.37182 1.56694 1.60076 1.42038 1.08267 1.75139 1.05207 1.16599 0.84660 1.14386 0.91364 1.20750 0.91361 0.96958 0.99708 1.20748 0.96523 1.11311 0.95428 1.17659 0.92676 0.90399 0.90688 1.19476 0.94577 1.15868 1.16026 0.88811 1.26222 0.93956 0.98746 0.95019 1.69672 1.03737 1.32176 1.37137 0.86276 0.81396 0.78479 0.79703 1.19501 1.21983 1.16270 1.20477 0.89874 1.11027 0.99521 1.20116 0.88699 1.04761 0.89830 1.98267 1.50777 1.88270 1.71286 1.22872 0.94200 0.98338 1.05649 1.21012 0.89438 0.84256 0.74579 1.90731 1.78746 1.21141 1.50185 0.89905 0.92001 0.92019 0.89193 0.89418 0.77097 0.76840 0.84417 0.87656 0.90183 0.86584 0.87182 0.86658 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.55 11.14 59.85 0.67 1.22 16 2 N -0.63 -4.88 3.33 -180.29 -0.60 -5.49 16 3 C 0.10 0.52 6.96 -3.12 -0.02 0.50 16 4 C 0.16 1.30 3.43 -66.30 -0.23 1.08 16 5 H 0.12 1.03 7.72 -51.93 -0.40 0.63 16 6 N -0.74 -7.48 5.16 -57.08 -0.29 -7.77 16 7 C 0.70 10.56 8.39 -86.92 -0.73 9.83 16 8 O -0.57 -10.67 13.01 5.30 0.07 -10.60 16 9 N -0.66 -10.50 5.21 -14.07 -0.07 -10.57 16 10 C 0.02 0.49 6.50 -83.52 -0.54 -0.06 16 11 C -0.07 -1.49 8.68 -39.79 -0.35 -1.83 16 12 C -0.22 -5.21 6.83 -39.25 -0.27 -5.47 16 13 C 0.09 2.19 5.19 -106.80 -0.55 1.63 16 14 C -0.43 -11.20 9.60 -37.86 -0.36 -11.56 16 15 H 0.09 2.54 8.06 -52.48 -0.42 2.11 16 16 C 0.08 2.03 5.47 -17.33 -0.09 1.94 16 17 N -0.80 -20.76 13.93 55.55 0.77 -19.99 16 18 Si 0.91 20.15 24.36 -169.99 -4.14 16.01 16 19 H -0.27 -5.81 6.77 56.52 0.38 -5.42 16 20 H -0.29 -6.22 7.11 56.52 0.40 -5.82 16 21 H -0.24 -5.35 6.45 56.52 0.36 -4.98 16 22 C -0.19 -4.20 9.50 -39.23 -0.37 -4.57 16 23 C -0.01 -0.11 6.30 -39.72 -0.25 -0.36 16 24 Cl -0.11 -1.89 27.70 -51.86 -1.44 -3.33 16 25 C -0.17 -1.65 6.58 -26.75 -0.18 -1.83 16 26 C 0.52 5.81 8.02 -10.86 -0.09 5.72 16 27 O -0.53 -8.20 17.35 5.55 0.10 -8.11 16 28 H 0.08 0.62 7.53 -51.93 -0.39 0.23 16 29 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 30 H 0.06 0.27 8.14 -51.93 -0.42 -0.15 16 31 H 0.09 0.33 8.14 -51.93 -0.42 -0.09 16 32 H 0.09 0.35 8.03 -51.93 -0.42 -0.07 16 33 H 0.40 3.06 8.59 -40.82 -0.35 2.71 16 34 H 0.40 5.25 7.65 -40.82 -0.31 4.94 16 35 H 0.14 2.99 5.50 -52.49 -0.29 2.70 16 36 H 0.11 2.49 4.19 -52.49 -0.22 2.27 16 37 H 0.29 6.72 8.30 -40.82 -0.34 6.38 16 38 H 0.12 2.47 8.06 -52.49 -0.42 2.05 16 39 H 0.11 1.33 8.09 -51.93 -0.42 0.91 16 40 H 0.12 0.95 8.14 -51.93 -0.42 0.53 16 LS Contribution 347.27 15.07 5.23 5.23 Total: -1.00 -31.34 347.27 -8.27 -39.60 By element: Atomic # 1 Polarization: 13.29 SS G_CDS: -4.53 Total: 8.76 kcal Atomic # 6 Polarization: -0.40 SS G_CDS: -3.37 Total: -3.77 kcal Atomic # 7 Polarization: -43.62 SS G_CDS: -0.20 Total: -43.81 kcal Atomic # 8 Polarization: -18.87 SS G_CDS: 0.17 Total: -18.70 kcal Atomic # 14 Polarization: 20.15 SS G_CDS: -4.14 Total: 16.01 kcal Atomic # 17 Polarization: -1.89 SS G_CDS: -1.44 Total: -3.33 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -31.34 -8.27 -39.60 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455710945.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.844 kcal (2) G-P(sol) polarization free energy of solvation -31.338 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.605 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds