Wall clock time and date at job start Tue Mar 31 2020 20:37:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34773 * 120.00363 * 2 1 4 4 O 1.21283 * 119.99941 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00312 * 179.97438 * 3 2 1 6 6 C 1.53496 * 114.20653 * 180.02562 * 5 3 2 7 7 N 1.47067 * 87.98461 * 220.14565 * 6 5 3 8 8 C 1.34781 * 136.06156 * 207.08403 * 7 6 5 9 9 O 1.21580 * 119.99720 * 359.97438 * 8 7 6 10 10 N 1.34768 * 120.00198 * 179.97438 * 8 7 6 11 11 C 1.39274 * 119.99996 * 185.40756 * 10 8 7 12 12 C 1.39466 * 119.83721 * 20.68495 * 11 10 8 13 13 C 1.36371 * 120.17702 * 179.70261 * 12 11 10 14 14 C 1.40893 * 119.85434 * 0.27204 * 13 12 11 15 15 C 1.41151 * 120.16412 * 179.97438 * 14 13 12 16 16 H 1.08003 * 120.00071 * 152.62627 * 15 14 13 17 17 C 1.39892 * 119.99799 * 332.63085 * 15 14 13 18 18 N 1.30878 * 120.00292 * 159.86818 * 17 15 14 19 19 Si 1.86799 * 119.99764 * 339.85952 * 17 15 14 20 20 H 1.48504 * 109.46742 * 95.20223 * 19 17 15 21 21 H 1.48502 * 109.47188 * 215.19766 * 19 17 15 22 22 H 1.48499 * 109.47354 * 335.20010 * 19 17 15 23 23 C 1.40841 * 119.67796 * 359.97438 * 14 13 12 24 24 C 1.36472 * 119.82414 * 0.02562 * 23 14 13 25 25 Cl 1.73601 * 119.93247 * 180.02562 * 24 23 14 26 26 C 1.47069 * 87.88362 * 27.34220 * 7 6 5 27 27 H 1.09004 * 109.46947 * 300.00593 * 1 2 3 28 28 H 1.09001 * 109.46892 * 59.99851 * 1 2 3 29 29 H 1.08999 * 109.47482 * 180.02562 * 1 2 3 30 30 H 0.96996 * 120.00173 * 179.97438 * 2 1 3 31 31 H 1.09001 * 113.27876 * 313.06036 * 5 3 2 32 32 H 1.08993 * 113.47356 * 105.36907 * 6 5 3 33 33 H 1.08998 * 113.52191 * 334.93250 * 6 5 3 34 34 H 0.97000 * 120.00240 * 5.41517 * 10 8 7 35 35 H 1.07999 * 119.90922 * 359.97360 * 12 11 10 36 36 H 1.08004 * 120.07672 * 180.29728 * 13 12 11 37 37 H 0.97000 * 120.00120 * 179.97438 * 18 17 15 38 38 H 1.08010 * 120.09117 * 179.97438 * 23 14 13 39 39 H 1.08994 * 113.46839 * 87.44190 * 26 7 6 40 40 H 1.09006 * 113.46582 * 217.87973 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 1.5325 2.2175 -0.0005 5 6 3.6459 1.1671 0.0006 6 6 4.2753 2.5671 0.0011 7 7 5.2791 2.0595 -0.9462 8 6 6.5535 2.3616 -1.2644 9 8 7.1255 3.2670 -0.6887 10 7 7.1938 1.6603 -2.2206 11 6 8.5433 1.8962 -2.4715 12 6 9.3335 2.5076 -1.4984 13 6 10.6569 2.7364 -1.7345 14 6 11.2250 2.3589 -2.9673 15 6 12.5941 2.5931 -3.2187 16 1 13.1330 1.9588 -3.9070 17 6 13.2529 3.6468 -2.5763 18 7 14.5583 3.6426 -2.4829 19 14 12.2693 5.0602 -1.8521 20 1 12.0272 4.8063 -0.4091 21 1 13.0302 6.3255 -2.0112 22 1 10.9688 5.1722 -2.5601 23 6 10.4202 1.7466 -3.9476 24 6 9.0973 1.5238 -3.6975 25 17 8.1028 0.7688 -4.9036 26 6 4.2783 1.0812 -1.3982 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 1.9500 -0.8400 0.0004 31 1 4.0764 0.4836 0.7325 32 1 4.6946 2.8542 0.9654 33 1 3.6281 3.3352 -0.4224 34 1 6.7147 0.9912 -2.7342 35 1 8.8970 2.7966 -0.5538 36 1 11.2685 3.2056 -0.9779 37 1 15.0151 4.3734 -2.0378 38 1 10.8487 1.4549 -4.8952 39 1 3.6314 1.4568 -2.1909 40 1 4.7003 0.1023 -1.6260 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455735197.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:37:08 Heat of formation + Delta-G solvation = 1.301695 kcal Electronic energy + Delta-G solvation = -25821.924807 eV Core-core repulsion = 21857.259016 eV Total energy + Delta-G solvation = -3964.665791 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.18035 -39.81569 -38.47034 -37.25812 -35.82649 -35.04028 -34.50825 -33.23327 -30.83748 -29.77517 -29.32266 -27.37572 -26.30667 -24.99772 -23.29225 -22.01876 -21.19133 -20.55827 -19.39007 -18.39727 -17.82766 -17.59559 -16.94601 -16.30643 -16.08608 -15.54873 -15.35354 -14.84553 -14.60380 -14.32904 -14.13427 -13.60740 -13.42919 -13.22137 -12.95169 -12.89938 -12.75479 -12.73416 -12.57672 -12.53551 -12.27010 -11.58306 -11.12427 -11.02160 -10.90835 -10.70848 -10.56765 -10.39454 -10.23742 -9.84752 -9.75735 -9.62202 -9.26128 -9.03835 -8.77234 -7.81081 -7.22363 -7.06400 -4.51775 2.11503 2.24762 2.36504 2.50236 2.79865 2.87269 3.11059 3.20783 3.31973 3.47832 3.78049 3.95288 3.99660 4.33830 4.40293 4.57568 4.70806 4.79558 4.99843 5.05003 5.12560 5.28241 5.33986 5.36747 5.48583 5.71024 5.89563 5.91157 6.25489 6.45072 6.55514 6.76596 6.89181 6.95539 7.03961 7.19740 7.43537 7.50682 7.74040 7.74320 7.85986 8.19881 8.22934 8.47325 8.66795 8.83168 9.94286 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.019955 B = 0.002672 C = 0.002417 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1402.849087 B =10477.698460 C =11581.131128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.733 5.733 3 C 0.528 3.472 4 O -0.531 6.531 5 C -0.156 4.156 6 C 0.151 3.849 7 N -0.668 5.668 8 C 0.731 3.269 9 O -0.567 6.567 10 N -0.658 5.658 11 C 0.021 3.979 12 C -0.068 4.068 13 C -0.225 4.225 14 C 0.090 3.910 15 C -0.433 4.433 16 H 0.094 0.906 17 C 0.085 3.915 18 N -0.796 5.796 19 Si 0.910 3.090 20 H -0.267 1.267 21 H -0.289 1.289 22 H -0.242 1.242 23 C -0.190 4.190 24 C -0.004 4.004 25 Cl -0.116 7.116 26 C 0.118 3.882 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.076 0.924 30 H 0.404 0.596 31 H 0.130 0.870 32 H 0.085 0.915 33 H 0.096 0.904 34 H 0.396 0.604 35 H 0.139 0.861 36 H 0.109 0.891 37 H 0.288 0.712 38 H 0.116 0.884 39 H 0.087 0.913 40 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.281 -9.403 3.947 24.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.385 5.385 3 C 0.313 3.687 4 O -0.407 6.407 5 C -0.178 4.178 6 C 0.027 3.973 7 N -0.409 5.409 8 C 0.435 3.565 9 O -0.444 6.444 10 N -0.303 5.303 11 C -0.073 4.073 12 C -0.088 4.088 13 C -0.244 4.244 14 C 0.086 3.914 15 C -0.461 4.461 16 H 0.112 0.888 17 C -0.136 4.136 18 N -0.419 5.419 19 Si 0.736 3.264 20 H -0.193 1.193 21 H -0.217 1.217 22 H -0.165 1.165 23 C -0.211 4.211 24 C -0.032 4.032 25 Cl -0.088 7.088 26 C -0.006 4.006 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.095 0.905 30 H 0.238 0.762 31 H 0.148 0.852 32 H 0.104 0.896 33 H 0.114 0.886 34 H 0.231 0.769 35 H 0.156 0.844 36 H 0.126 0.874 37 H 0.099 0.901 38 H 0.134 0.866 39 H 0.105 0.895 40 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -21.877 -7.895 4.259 23.644 hybrid contribution -0.419 -0.312 -0.142 0.541 sum -22.296 -8.206 4.117 24.112 Atomic orbital electron populations 1.21568 0.79396 1.02369 1.02503 1.45810 1.07916 1.08780 1.76001 1.20218 0.89116 0.83718 0.75647 1.90743 1.70046 1.31289 1.48625 1.23240 0.91756 1.02047 1.00773 1.22585 0.86299 0.94110 0.94326 1.48585 1.09655 1.39443 1.43261 1.15136 0.78790 0.81576 0.80996 1.90865 1.64577 1.32566 1.56423 1.41945 1.09797 1.40876 1.37680 1.16618 0.81940 1.14213 0.94541 1.20821 0.92831 0.96935 0.98231 1.20836 0.95117 1.10437 0.98036 1.17637 0.93025 0.90585 0.90118 1.19440 0.92377 1.12221 1.22072 0.88804 1.26206 0.94976 0.99825 0.92584 1.69716 1.09631 1.31023 1.31547 0.86330 0.81197 0.78572 0.80272 1.19295 1.21673 1.16508 1.20466 0.90563 1.09993 1.00074 1.20134 0.92156 1.03489 0.87452 1.98260 1.71370 1.81652 1.57509 1.22830 0.88785 0.94399 0.94610 0.92110 0.92079 0.90537 0.76191 0.85224 0.89613 0.88619 0.76943 0.84392 0.87382 0.90143 0.86621 0.89496 0.89667 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.38 10.70 59.84 0.64 1.02 16 2 N -0.73 -3.64 5.71 -67.08 -0.38 -4.03 16 3 C 0.53 4.29 7.40 -10.99 -0.08 4.21 16 4 O -0.53 -6.54 15.95 5.56 0.09 -6.45 16 5 C -0.16 -1.13 4.50 -91.12 -0.41 -1.54 16 6 C 0.15 1.63 7.96 -8.51 -0.07 1.57 16 7 N -0.67 -8.65 3.69 -190.87 -0.70 -9.35 16 8 C 0.73 13.03 8.62 -86.92 -0.75 12.28 16 9 O -0.57 -12.42 14.01 5.29 0.07 -12.35 16 10 N -0.66 -11.54 5.22 -14.07 -0.07 -11.61 16 11 C 0.02 0.45 6.51 -83.52 -0.54 -0.10 16 12 C -0.07 -1.58 8.69 -39.80 -0.35 -1.93 16 13 C -0.22 -5.49 7.17 -39.25 -0.28 -5.77 16 14 C 0.09 2.25 5.15 -106.80 -0.55 1.70 16 15 C -0.43 -11.37 9.55 -37.86 -0.36 -11.73 16 16 H 0.09 2.54 8.06 -52.48 -0.42 2.11 16 17 C 0.08 2.18 5.39 -17.34 -0.09 2.09 16 18 N -0.80 -20.66 13.93 55.54 0.77 -19.89 16 19 Si 0.91 21.04 24.51 -169.99 -4.17 16.87 16 20 H -0.27 -6.06 6.65 56.52 0.38 -5.68 16 21 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 22 H -0.24 -5.87 6.91 56.52 0.39 -5.48 16 23 C -0.19 -4.33 9.50 -39.23 -0.37 -4.70 16 24 C 0.00 -0.08 6.30 -39.71 -0.25 -0.33 16 25 Cl -0.12 -1.96 27.69 -51.86 -1.44 -3.40 16 26 C 0.12 0.96 7.88 -8.37 -0.07 0.89 16 27 H 0.06 0.33 8.14 -51.93 -0.42 -0.10 16 28 H 0.06 0.33 8.14 -51.93 -0.42 -0.09 16 29 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 30 H 0.40 0.83 8.83 -40.82 -0.36 0.47 16 31 H 0.13 0.69 8.14 -51.93 -0.42 0.27 16 32 H 0.09 0.94 8.14 -51.93 -0.42 0.52 16 33 H 0.10 1.10 7.46 -51.93 -0.39 0.71 16 34 H 0.40 5.81 7.34 -40.82 -0.30 5.51 16 35 H 0.14 3.23 5.44 -52.49 -0.29 2.95 16 36 H 0.11 2.64 4.52 -52.48 -0.24 2.41 16 37 H 0.29 6.77 8.30 -40.82 -0.34 6.43 16 38 H 0.12 2.49 8.06 -52.48 -0.42 2.07 16 39 H 0.09 0.67 8.10 -51.93 -0.42 0.25 16 40 H 0.08 0.52 8.14 -51.93 -0.42 0.10 16 LS Contribution 351.66 15.07 5.30 5.30 Total: -1.00 -32.51 351.66 -8.60 -41.11 By element: Atomic # 1 Polarization: 10.68 SS G_CDS: -4.55 Total: 6.14 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -3.53 Total: -2.35 kcal Atomic # 7 Polarization: -44.48 SS G_CDS: -0.39 Total: -44.87 kcal Atomic # 8 Polarization: -18.96 SS G_CDS: 0.16 Total: -18.80 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -4.17 Total: 16.87 kcal Atomic # 17 Polarization: -1.96 SS G_CDS: -1.44 Total: -3.40 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -32.51 -8.60 -41.11 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455735197.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.416 kcal (2) G-P(sol) polarization free energy of solvation -32.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.114 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds