Wall clock time and date at job start Tue Mar 31 2020 20:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46500 * 109.46603 * 2 1 4 4 C 1.46224 * 124.85224 * 270.32864 * 3 2 1 5 5 N 1.46799 * 108.05668 * 180.17535 * 4 3 2 6 6 C 1.34775 * 127.03254 * 179.84148 * 5 4 3 7 7 O 1.21581 * 120.00238 * 359.71232 * 6 5 4 8 8 N 1.34784 * 120.00101 * 179.71483 * 6 5 4 9 9 C 1.39268 * 120.00141 * 184.67393 * 8 6 5 10 10 C 1.39475 * 119.83939 * 329.01360 * 9 8 6 11 11 C 1.36372 * 120.18118 * 180.27788 * 10 9 8 12 12 C 1.40892 * 119.84760 * 359.74527 * 11 10 9 13 13 C 1.41150 * 120.15788 * 180.02562 * 12 11 10 14 14 H 1.07996 * 120.00104 * 28.82937 * 13 12 11 15 15 C 1.39889 * 119.99951 * 208.83573 * 13 12 11 16 16 N 1.30877 * 120.00358 * 16.25163 * 15 13 12 17 17 Si 1.86804 * 119.99824 * 196.25878 * 15 13 12 18 18 H 1.48498 * 109.47336 * 359.97438 * 17 15 13 19 19 H 1.48501 * 109.47371 * 119.99957 * 17 15 13 20 20 H 1.48507 * 109.46570 * 239.99659 * 17 15 13 21 21 C 1.40845 * 119.68483 * 0.02562 * 12 11 10 22 22 C 1.36472 * 119.81489 * 359.97438 * 21 12 11 23 23 Cl 1.73601 * 119.92331 * 179.97438 * 22 21 12 24 24 C 1.46989 * 105.93527 * 359.58307 * 5 4 3 25 25 C 1.34298 * 124.85727 * 90.03149 * 3 2 1 26 26 O 1.21280 * 125.42513 * 0.02562 * 25 3 2 27 27 H 1.09000 * 109.47690 * 60.00130 * 1 2 3 28 28 H 1.09006 * 109.46785 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.47142 * 299.99825 * 1 2 3 30 30 H 1.08995 * 109.46826 * 240.00125 * 2 1 3 31 31 H 1.08993 * 109.47064 * 119.99913 * 2 1 3 32 32 H 1.08996 * 109.88793 * 60.44337 * 4 3 2 33 33 H 1.09004 * 109.62777 * 299.75642 * 4 3 2 34 34 H 0.96996 * 119.99842 * 4.66019 * 8 6 5 35 35 H 1.08003 * 119.90706 * 0.02913 * 10 9 8 36 36 H 1.08000 * 120.07406 * 179.72558 * 11 10 9 37 37 H 0.97002 * 120.00733 * 180.02562 * 16 15 13 38 38 H 1.07992 * 120.09062 * 180.02562 * 21 12 11 39 39 H 1.09002 * 110.03505 * 119.53890 * 24 5 4 40 40 H 1.09004 * 110.03556 * 240.98259 * 24 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0182 1.3813 0.0000 4 6 2.2902 2.1714 -1.1999 5 7 2.7648 3.4942 -0.7758 6 6 3.1272 4.5201 -1.5713 7 8 3.0827 4.3972 -2.7800 8 7 3.5389 5.6822 -1.0268 9 6 3.8201 6.7736 -1.8450 10 6 4.3074 6.5662 -3.1353 11 6 4.5904 7.6299 -3.9405 12 6 4.3846 8.9412 -3.4681 13 6 4.6748 10.0469 -4.2961 14 1 4.6005 9.9521 -5.3693 15 6 5.0589 11.2654 -3.7265 16 7 5.4567 11.3089 -2.4804 17 14 5.0039 12.8308 -4.7445 18 1 4.5222 12.5145 -6.1132 19 1 4.0808 13.8038 -4.1069 20 1 6.3655 13.4183 -4.8228 21 6 3.8877 9.1435 -2.1659 22 6 3.6090 8.0694 -1.3715 23 17 2.9971 8.3156 0.2344 24 6 2.7581 3.4732 0.6939 25 6 2.2746 2.1047 1.1020 26 8 2.1392 1.7186 2.2437 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5138 0.8899 32 1 1.3787 2.2782 -1.7880 33 1 3.0577 1.6785 -1.7967 34 1 3.6391 5.7586 -0.0650 35 1 4.4647 5.5605 -3.4964 36 1 4.9718 7.4674 -4.9377 37 1 5.7227 12.1539 -2.0853 38 1 3.7271 10.1458 -1.7973 39 1 3.7655 3.6423 1.0744 40 1 2.0811 4.2377 1.0753 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455738177.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:22:30 Heat of formation + Delta-G solvation = -23.392168 kcal Electronic energy + Delta-G solvation = -26090.373574 eV Core-core repulsion = 22124.636977 eV Total energy + Delta-G solvation = -3965.736597 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.24519 -39.69761 -37.79271 -36.80205 -35.58702 -35.00510 -34.58237 -33.10591 -31.08668 -29.49610 -29.03832 -28.73991 -26.15149 -24.61739 -23.53324 -21.95151 -21.07106 -20.20743 -19.99780 -18.36825 -17.50550 -17.12665 -16.61823 -16.33744 -16.09412 -15.44908 -15.14170 -14.88954 -14.39925 -14.29187 -14.09477 -13.89597 -13.76635 -13.21721 -13.06931 -13.01173 -12.68011 -12.55643 -12.35836 -12.31237 -11.95587 -11.53657 -11.33084 -11.18524 -11.03925 -10.55487 -10.49358 -10.36871 -10.18923 -9.98619 -9.74397 -9.57403 -9.32630 -8.98691 -8.75223 -7.60720 -7.14761 -6.88972 -4.46273 2.05594 2.11610 2.40847 2.68734 2.79894 2.99989 3.03113 3.08184 3.10699 3.40158 3.85035 3.86594 4.04858 4.45745 4.51426 4.72700 4.87821 4.95716 5.00464 5.05144 5.14295 5.27123 5.40161 5.44035 5.56292 5.77662 5.93619 6.12825 6.44683 6.55437 6.65415 6.79015 6.90601 6.98938 7.08261 7.25670 7.55312 7.61619 7.67400 7.82292 8.03381 8.14060 8.36556 8.65262 8.70956 8.79498 10.05424 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.026505 B = 0.002566 C = 0.002400 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1056.155626 B =10909.295881 C =11661.481078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.130 3.870 3 N -0.626 5.626 4 C 0.357 3.643 5 N -0.648 5.648 6 C 0.731 3.269 7 O -0.563 6.563 8 N -0.653 5.653 9 C 0.015 3.985 10 C -0.071 4.071 11 C -0.209 4.209 12 C 0.115 3.885 13 C -0.454 4.454 14 H 0.084 0.916 15 C 0.075 3.925 16 N -0.788 5.788 17 Si 0.910 3.090 18 H -0.259 1.259 19 H -0.271 1.271 20 H -0.274 1.274 21 C -0.143 4.143 22 C -0.015 4.015 23 Cl -0.121 7.121 24 C 0.065 3.935 25 C 0.523 3.477 26 O -0.516 6.516 27 H 0.060 0.940 28 H 0.071 0.929 29 H 0.060 0.940 30 H 0.085 0.915 31 H 0.088 0.912 32 H 0.080 0.920 33 H 0.081 0.919 34 H 0.396 0.604 35 H 0.126 0.874 36 H 0.103 0.897 37 H 0.283 0.717 38 H 0.129 0.871 39 H 0.107 0.893 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.325 -14.654 4.814 16.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.009 3.991 3 N -0.362 5.362 4 C 0.147 3.853 5 N -0.391 5.391 6 C 0.434 3.566 7 O -0.439 6.439 8 N -0.299 5.299 9 C -0.078 4.078 10 C -0.091 4.091 11 C -0.229 4.229 12 C 0.112 3.888 13 C -0.483 4.483 14 H 0.102 0.898 15 C -0.144 4.144 16 N -0.413 5.413 17 Si 0.734 3.266 18 H -0.183 1.183 19 H -0.196 1.196 20 H -0.199 1.199 21 C -0.163 4.163 22 C -0.043 4.043 23 Cl -0.092 7.092 24 C -0.062 4.062 25 C 0.310 3.690 26 O -0.391 6.391 27 H 0.080 0.920 28 H 0.090 0.910 29 H 0.079 0.921 30 H 0.104 0.896 31 H 0.106 0.894 32 H 0.098 0.902 33 H 0.099 0.901 34 H 0.231 0.769 35 H 0.144 0.856 36 H 0.121 0.879 37 H 0.094 0.906 38 H 0.147 0.853 39 H 0.125 0.875 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -5.390 -14.770 4.780 16.434 hybrid contribution 0.011 0.885 0.392 0.968 sum -5.379 -13.885 5.172 15.763 Atomic orbital electron populations 1.22191 0.95305 1.02699 1.02864 1.21378 0.94623 0.79332 1.03789 1.48495 1.66131 1.14478 1.07140 1.20997 0.99919 0.79199 0.85145 1.47208 1.72420 1.13858 1.05647 1.15051 0.78380 0.79090 0.84070 1.90920 1.60631 1.81119 1.11277 1.41947 1.68333 1.09796 1.09821 1.16606 1.14948 0.82711 0.93581 1.20547 0.97186 0.99395 0.91955 1.20827 1.09409 0.92303 1.00362 1.17561 0.87931 0.92240 0.91115 1.19573 1.39674 0.94051 0.94994 0.89791 1.25949 0.92358 1.00930 0.95190 1.69815 1.29465 1.28446 1.13551 0.86226 0.78743 0.80644 0.80982 1.18268 1.19596 1.19896 1.20789 1.03656 0.96705 0.95171 1.20304 1.05342 0.93461 0.85185 1.98254 1.87238 1.97129 1.26617 1.21916 1.04442 0.97298 0.82505 1.20455 0.76787 0.86815 0.84930 1.90782 1.53404 1.75258 1.19676 0.92041 0.91013 0.92091 0.89639 0.89405 0.90197 0.90149 0.76880 0.85637 0.87873 0.90568 0.85290 0.87548 0.87477 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.10 10.24 37.16 0.38 -0.72 16 2 C 0.13 0.88 6.70 -4.04 -0.03 0.86 16 3 N -0.63 -5.87 2.93 -177.59 -0.52 -6.39 16 4 C 0.36 3.60 7.57 -63.72 -0.48 3.12 16 5 N -0.65 -8.14 3.36 -184.00 -0.62 -8.76 16 6 C 0.73 12.21 8.39 -86.91 -0.73 11.48 16 7 O -0.56 -11.20 13.88 5.29 0.07 -11.13 16 8 N -0.65 -11.33 5.04 -14.07 -0.07 -11.40 16 9 C 0.02 0.32 6.39 -83.52 -0.53 -0.21 16 10 C -0.07 -1.58 8.65 -39.79 -0.34 -1.92 16 11 C -0.21 -4.91 9.74 -39.25 -0.38 -5.30 16 12 C 0.11 2.89 5.53 -106.80 -0.59 2.30 16 13 C -0.45 -11.33 9.02 -37.86 -0.34 -11.67 16 14 H 0.08 2.01 7.90 -52.49 -0.41 1.60 16 15 C 0.07 1.77 5.13 -17.34 -0.09 1.68 16 16 N -0.79 -19.33 11.15 55.54 0.62 -18.71 16 17 Si 0.91 17.79 29.59 -169.99 -5.03 12.76 16 18 H -0.26 -5.02 7.11 56.52 0.40 -4.62 16 19 H -0.27 -5.24 7.11 56.52 0.40 -4.84 16 20 H -0.27 -5.28 7.11 56.52 0.40 -4.88 16 21 C -0.14 -3.49 8.37 -39.23 -0.33 -3.82 16 22 C -0.01 -0.32 6.30 -39.72 -0.25 -0.57 16 23 Cl -0.12 -2.25 27.85 -51.86 -1.44 -3.69 16 24 C 0.07 0.69 6.36 -4.90 -0.03 0.65 16 25 C 0.52 5.97 8.13 -11.17 -0.09 5.88 16 26 O -0.52 -7.38 17.67 5.56 0.10 -7.29 16 27 H 0.06 0.40 8.14 -51.93 -0.42 -0.03 16 28 H 0.07 0.34 8.14 -51.93 -0.42 -0.09 16 29 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 30 H 0.09 0.40 8.14 -51.93 -0.42 -0.02 16 31 H 0.09 0.63 7.97 -51.93 -0.41 0.22 16 32 H 0.08 0.78 8.14 -51.93 -0.42 0.36 16 33 H 0.08 0.76 8.14 -51.93 -0.42 0.33 16 34 H 0.40 5.96 7.02 -40.82 -0.29 5.67 16 35 H 0.13 2.76 5.87 -52.48 -0.31 2.45 16 36 H 0.10 2.28 8.06 -52.49 -0.42 1.85 16 37 H 0.28 6.32 8.30 -40.82 -0.34 5.98 16 38 H 0.13 3.28 6.42 -52.49 -0.34 2.94 16 39 H 0.11 0.99 8.14 -51.93 -0.42 0.57 16 40 H 0.11 1.05 8.14 -51.93 -0.42 0.63 16 LS Contribution 355.98 15.07 5.36 5.36 Total: -1.00 -29.20 355.98 -10.07 -39.27 By element: Atomic # 1 Polarization: 12.90 SS G_CDS: -4.70 Total: 8.20 kcal Atomic # 6 Polarization: 5.61 SS G_CDS: -3.84 Total: 1.77 kcal Atomic # 7 Polarization: -44.67 SS G_CDS: -0.59 Total: -45.26 kcal Atomic # 8 Polarization: -18.59 SS G_CDS: 0.17 Total: -18.42 kcal Atomic # 14 Polarization: 17.79 SS G_CDS: -5.03 Total: 12.76 kcal Atomic # 17 Polarization: -2.25 SS G_CDS: -1.44 Total: -3.69 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -29.20 -10.07 -39.27 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455738177.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.875 kcal (2) G-P(sol) polarization free energy of solvation -29.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.392 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds