Wall clock time and date at job start Tue Mar 31 2020 20:40:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42897 * 114.00407 * 2 1 4 4 C 1.52998 * 109.47357 * 179.97438 * 3 2 1 5 5 N 1.46506 * 109.46810 * 65.00222 * 4 3 2 6 6 C 1.36932 * 120.00455 * 267.83668 * 5 4 3 7 7 H 1.08006 * 119.99449 * 8.59474 * 6 5 4 8 8 C 1.38801 * 120.00464 * 188.59856 * 6 5 4 9 9 N 1.31628 * 120.00259 * 25.77442 * 8 6 5 10 10 Si 1.86801 * 120.00248 * 205.77727 * 8 6 5 11 11 H 1.48496 * 109.46993 * 60.00054 * 10 8 6 12 12 H 1.48499 * 109.47281 * 179.97438 * 10 8 6 13 13 H 1.48498 * 109.46915 * 299.99678 * 10 8 6 14 14 C 1.46505 * 119.99623 * 87.83138 * 5 4 3 15 15 C 1.50700 * 109.46985 * 90.00536 * 14 5 4 16 16 O 1.21292 * 120.00060 * 359.97438 * 15 14 5 17 17 N 1.34770 * 120.00296 * 179.97438 * 15 14 5 18 18 C 1.39545 * 120.00575 * 185.16881 * 17 15 14 19 19 C 1.39149 * 119.91501 * 212.90298 * 18 17 15 20 20 C 1.37659 * 120.11787 * 179.69700 * 19 18 17 21 21 C 1.39808 * 119.92447 * 0.60476 * 20 19 18 22 22 C 1.43198 * 120.08764 * 179.69618 * 21 20 19 23 23 N 9.74252 * 166.39495 * 254.43921 * 5 1 2 24 24 C 1.39882 * 119.82557 * 359.41588 * 21 20 19 25 25 Cl 1.73596 * 120.06348 * 180.30250 * 24 21 20 26 26 C 1.37886 * 119.88352 * 0.27851 * 24 21 20 27 27 H 1.08995 * 109.47089 * 59.99706 * 1 2 3 28 28 H 1.08999 * 109.47428 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46473 * 299.99770 * 1 2 3 30 30 H 1.08999 * 109.46835 * 60.00399 * 3 2 1 31 31 H 1.08996 * 109.47252 * 300.00408 * 3 2 1 32 32 H 1.08993 * 109.47693 * 305.00633 * 4 3 2 33 33 H 1.09001 * 109.47075 * 184.99724 * 4 3 2 34 34 H 0.96994 * 120.00481 * 180.02562 * 9 8 6 35 35 H 1.08994 * 109.47638 * 330.00343 * 14 5 4 36 36 H 1.09000 * 109.46830 * 209.99878 * 14 5 4 37 37 H 0.96998 * 120.00110 * 5.17780 * 17 15 14 38 38 H 1.08000 * 119.94606 * 0.02562 * 19 18 17 39 39 H 1.07993 * 120.04047 * 180.31790 * 20 19 18 40 40 H 1.08000 * 119.96316 * 179.97438 * 26 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 7 3.9767 0.5638 -1.2510 6 6 4.1404 -0.7938 -1.3215 7 1 3.8140 -1.4202 -0.5044 8 6 4.7258 -1.3650 -2.4429 9 7 5.5581 -0.6617 -3.1813 10 14 4.3326 -3.1319 -2.9044 11 1 2.8748 -3.2657 -3.1533 12 1 5.0800 -3.5006 -4.1335 13 1 4.7301 -4.0337 -1.7936 14 6 4.2426 1.3958 -2.4272 15 6 5.6877 1.8232 -2.4238 16 8 6.4230 1.4682 -1.5270 17 7 6.1630 2.5999 -3.4174 18 6 7.5232 2.9067 -3.4734 19 6 7.9369 4.1375 -3.9735 20 6 9.2773 4.4471 -4.0248 21 6 10.2250 3.5179 -3.5853 22 6 11.6205 3.8337 -3.6432 23 7 12.7274 4.0846 -3.6894 24 6 9.8061 2.2812 -3.0834 25 17 10.9771 1.1260 -2.5287 26 6 8.4612 1.9815 -3.0296 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3632 0.5138 0.8901 30 1 1.6888 1.8463 0.8900 31 1 1.6887 1.8464 -0.8899 32 1 3.8509 0.5683 0.8425 33 1 3.9785 2.1764 0.0902 34 1 5.9669 -1.0607 -3.9652 35 1 3.6028 2.2778 -2.4006 36 1 4.0351 0.8235 -3.3314 37 1 5.5597 2.9457 -4.0936 38 1 7.2049 4.8534 -4.3171 39 1 9.5967 5.4047 -4.4085 40 1 8.1364 1.0270 -2.6427 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459532334.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:40:35 Heat of formation + Delta-G solvation = 8.769884 kcal Electronic energy + Delta-G solvation = -26449.405644 eV Core-core repulsion = 22485.063697 eV Total energy + Delta-G solvation = -3964.341946 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -40.05174 -38.36249 -37.40295 -36.39889 -36.32512 -35.18390 -33.87328 -31.63148 -30.81817 -30.18143 -28.83554 -26.86151 -25.85809 -23.82266 -23.10468 -22.79870 -20.84679 -19.65768 -18.93667 -17.70744 -16.76774 -16.30412 -15.92297 -15.56070 -15.23190 -14.85459 -14.67904 -14.37205 -14.26433 -14.03761 -13.83717 -13.64692 -13.25174 -13.09610 -12.86767 -12.66399 -12.59625 -12.26174 -12.09207 -11.63731 -11.61504 -11.33182 -11.27620 -11.03065 -10.86586 -10.83149 -10.52945 -10.47034 -10.15077 -9.83784 -9.78516 -9.12267 -9.04208 -8.73454 -8.40043 -7.79900 -7.05421 -5.90031 -3.11394 0.76573 1.31212 2.15208 2.72923 2.96587 3.41477 3.47526 3.50294 3.61164 3.77208 3.98120 4.09797 4.37334 4.51012 4.80601 5.12567 5.19320 5.29775 5.36574 5.44660 5.54584 5.62074 5.71245 5.83707 5.89775 5.93830 5.97517 6.02627 6.05309 6.22739 6.27254 6.35382 6.51038 6.67254 6.76634 6.94231 7.24830 7.54436 7.73532 7.82739 8.04281 8.23300 9.09105 9.28799 9.74541 10.15956 11.22383 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.015228 B = 0.003274 C = 0.002927 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1838.268283 B = 8549.446405 C = 9563.931255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.364 6.364 3 C 0.044 3.956 4 C 0.148 3.852 5 N -0.563 5.563 6 C -0.223 4.223 7 H 0.082 0.918 8 C -0.004 4.004 9 N -0.910 5.910 10 Si 0.903 3.097 11 H -0.287 1.287 12 H -0.294 1.294 13 H -0.286 1.286 14 C 0.165 3.835 15 C 0.523 3.477 16 O -0.499 6.499 17 N -0.685 5.685 18 C 0.226 3.774 19 C -0.169 4.169 20 C -0.038 4.038 21 C -0.072 4.072 22 C 0.266 3.734 23 N -0.427 5.427 24 C 0.030 3.970 25 Cl -0.058 7.058 26 C -0.116 4.116 27 H 0.033 0.967 28 H 0.077 0.923 29 H 0.028 0.972 30 H 0.032 0.968 31 H 0.038 0.962 32 H 0.061 0.939 33 H 0.054 0.946 34 H 0.254 0.746 35 H 0.040 0.960 36 H 0.110 0.890 37 H 0.404 0.596 38 H 0.137 0.863 39 H 0.138 0.862 40 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.565 10.732 -2.191 11.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.282 6.282 3 C -0.035 4.035 4 C 0.021 3.979 5 N -0.281 5.281 6 C -0.351 4.351 7 H 0.100 0.900 8 C -0.200 4.200 9 N -0.557 5.557 10 Si 0.733 3.267 11 H -0.214 1.214 12 H -0.220 1.220 13 H -0.212 1.212 14 C 0.034 3.966 15 C 0.311 3.689 16 O -0.370 6.370 17 N -0.330 5.330 18 C 0.125 3.875 19 C -0.190 4.190 20 C -0.059 4.059 21 C -0.078 4.078 22 C -0.049 4.049 23 N -0.103 5.103 24 C 0.000 4.000 25 Cl -0.028 7.028 26 C -0.137 4.137 27 H 0.051 0.949 28 H 0.096 0.904 29 H 0.047 0.953 30 H 0.050 0.950 31 H 0.056 0.944 32 H 0.079 0.921 33 H 0.072 0.928 34 H 0.064 0.936 35 H 0.058 0.942 36 H 0.128 0.872 37 H 0.239 0.761 38 H 0.155 0.845 39 H 0.156 0.844 40 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -1.156 10.385 -1.591 10.569 hybrid contribution -0.867 -0.820 -0.687 1.377 sum -2.022 9.565 -2.278 10.038 Atomic orbital electron populations 1.22642 0.83322 1.01848 0.98719 1.88112 1.17487 1.27671 1.94972 1.23386 0.97672 0.84521 0.97908 1.20835 0.89592 0.97201 0.90261 1.43862 1.74634 1.03684 1.05912 1.19268 1.32091 0.81085 1.02705 0.90043 1.24585 0.97835 0.97953 0.99647 1.69775 1.29234 1.37240 1.19487 0.86319 0.77912 0.84891 0.77548 1.21371 1.22016 1.21227 1.20759 0.88150 0.93356 0.94366 1.22864 0.93512 0.73543 0.79024 1.90557 1.59283 1.50581 1.36551 1.44371 1.05091 1.52908 1.30602 1.17994 0.85573 0.91165 0.92773 1.20879 0.95908 0.95691 1.06568 1.20761 0.91406 0.97687 0.96037 1.15701 0.85547 0.95507 1.11033 1.25475 0.92508 0.93529 0.93400 1.81177 1.11449 1.08192 1.09499 1.20758 0.90829 0.89644 0.98788 1.98390 1.57755 1.58978 1.87723 1.21348 0.88786 1.02054 1.01495 0.94888 0.90443 0.95313 0.94973 0.94360 0.92091 0.92801 0.93556 0.94197 0.87237 0.76051 0.84480 0.84418 0.81194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 11.01 101.05 1.11 1.55 16 2 O -0.36 -6.65 10.28 -35.23 -0.36 -7.01 16 3 C 0.04 0.72 6.28 37.16 0.23 0.95 16 4 C 0.15 2.79 6.08 -4.04 -0.02 2.77 16 5 N -0.56 -12.48 1.99 -174.61 -0.35 -12.83 16 6 C -0.22 -5.67 9.29 -15.07 -0.14 -5.81 16 7 H 0.08 2.16 7.95 -52.48 -0.42 1.74 16 8 C 0.00 -0.11 4.87 -17.43 -0.08 -0.20 16 9 N -0.91 -23.09 9.00 55.49 0.50 -22.59 16 10 Si 0.90 21.12 29.63 -169.99 -5.04 16.08 16 11 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 12 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 13 H -0.29 -6.84 7.11 56.52 0.40 -6.43 16 14 C 0.17 3.23 5.44 -5.19 -0.03 3.20 16 15 C 0.52 10.26 5.62 -10.99 -0.06 10.20 16 16 O -0.50 -11.87 13.77 5.55 0.08 -11.79 16 17 N -0.68 -10.32 5.32 -9.85 -0.05 -10.38 16 18 C 0.23 3.33 6.29 -83.72 -0.53 2.81 16 19 C -0.17 -1.85 9.94 -39.45 -0.39 -2.24 16 20 C -0.04 -0.40 9.75 -39.21 -0.38 -0.78 16 21 C -0.07 -0.98 5.74 -106.77 -0.61 -1.59 16 22 C 0.27 3.83 14.38 -22.48 -0.32 3.51 16 23 N -0.43 -6.79 18.54 41.83 0.78 -6.01 16 24 C 0.03 0.47 6.34 -39.10 -0.25 0.22 16 25 Cl -0.06 -0.93 28.02 -51.86 -1.45 -2.38 16 26 C -0.12 -2.00 8.41 -39.42 -0.33 -2.33 16 27 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 28 H 0.08 0.97 8.14 -51.93 -0.42 0.55 16 29 H 0.03 0.33 8.14 -51.93 -0.42 -0.09 16 30 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 31 H 0.04 0.59 8.14 -51.93 -0.42 0.17 16 32 H 0.06 1.23 8.02 -51.93 -0.42 0.81 16 33 H 0.05 0.93 8.09 -51.93 -0.42 0.51 16 34 H 0.25 6.50 8.31 -40.82 -0.34 6.16 16 35 H 0.04 0.64 8.07 -51.93 -0.42 0.22 16 36 H 0.11 2.34 6.33 -51.93 -0.33 2.01 16 37 H 0.40 4.58 8.81 -40.82 -0.36 4.22 16 38 H 0.14 1.05 8.06 -52.49 -0.42 0.63 16 39 H 0.14 1.06 8.06 -52.49 -0.42 0.63 16 40 H 0.17 3.66 6.36 -52.49 -0.33 3.33 16 LS Contribution 366.08 15.07 5.52 5.52 Total: -1.00 -30.60 366.08 -6.98 -37.58 By element: Atomic # 1 Polarization: 6.35 SS G_CDS: -4.79 Total: 1.56 kcal Atomic # 6 Polarization: 14.06 SS G_CDS: -1.81 Total: 12.25 kcal Atomic # 7 Polarization: -52.68 SS G_CDS: 0.88 Total: -51.80 kcal Atomic # 8 Polarization: -18.51 SS G_CDS: -0.29 Total: -18.80 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.04 Total: 16.08 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.45 Total: -2.38 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -30.60 -6.98 -37.58 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459532334.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.348 kcal (2) G-P(sol) polarization free energy of solvation -30.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds