Wall clock time and date at job start Tue Mar 31 2020 20:39:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 114.00080 * 2 1 4 4 C 1.52996 * 109.47015 * 179.97438 * 3 2 1 5 5 N 1.46501 * 109.46905 * 65.00593 * 4 3 2 6 6 C 1.36943 * 119.99943 * 269.99478 * 5 4 3 7 7 H 1.07993 * 119.99637 * 146.28635 * 6 5 4 8 8 C 1.38807 * 119.99918 * 326.29257 * 6 5 4 9 9 N 1.31623 * 119.99752 * 336.44436 * 8 6 5 10 10 Si 1.86795 * 120.00244 * 156.44695 * 8 6 5 11 11 H 1.48509 * 109.47060 * 359.97438 * 10 8 6 12 12 H 1.48502 * 109.47314 * 119.99429 * 10 8 6 13 13 H 1.48495 * 109.47303 * 239.99877 * 10 8 6 14 14 C 1.46496 * 120.00194 * 89.99709 * 5 4 3 15 15 C 1.50698 * 109.47258 * 266.65361 * 14 5 4 16 16 C 1.38145 * 119.97766 * 114.99846 * 15 14 5 17 17 C 1.39951 * 118.92178 * 179.97438 * 16 15 14 18 18 O 1.22101 * 120.51525 * 180.02562 * 17 16 15 19 19 N 1.35016 * 118.96852 * 359.97438 * 17 16 15 20 20 C 1.36219 * 119.65430 * 179.97438 * 19 17 16 21 21 C 1.35299 * 120.72829 * 180.02562 * 20 19 17 22 22 Cl 1.73601 * 119.93667 * 179.97438 * 21 20 19 23 23 C 1.40279 * 120.12672 * 359.97438 * 21 20 19 24 24 C 1.36259 * 119.55339 * 0.02562 * 23 21 20 25 25 C 1.36686 * 119.87626 * 359.97438 * 19 17 16 26 26 N 1.32367 * 119.97310 * 294.93280 * 15 14 5 27 27 H 1.08994 * 109.47431 * 59.99714 * 1 2 3 28 28 H 1.09000 * 109.47207 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.46873 * 299.99402 * 1 2 3 30 30 H 1.09005 * 109.46731 * 60.00088 * 3 2 1 31 31 H 1.09001 * 109.47160 * 300.00439 * 3 2 1 32 32 H 1.08999 * 109.47315 * 305.00366 * 4 3 2 33 33 H 1.08998 * 109.47111 * 185.00205 * 4 3 2 34 34 H 0.97006 * 119.99616 * 179.97438 * 9 8 6 35 35 H 1.09005 * 109.47280 * 146.65371 * 14 5 4 36 36 H 1.09002 * 109.47388 * 26.65399 * 14 5 4 37 37 H 1.07996 * 120.53286 * 0.25682 * 16 15 14 38 38 H 1.07998 * 119.63663 * 0.02562 * 20 19 17 39 39 H 1.08003 * 120.22551 * 179.97438 * 23 21 20 40 40 H 1.08007 * 120.26173 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5354 1.1846 0.0006 5 7 3.9766 0.5640 -1.2510 6 6 4.0978 -0.7975 -1.3346 7 1 3.8827 -1.3025 -2.2646 8 6 4.4969 -1.5283 -0.2240 9 7 5.1882 -0.9463 0.7330 10 14 4.0531 -3.3376 -0.0877 11 1 3.2780 -3.7488 -1.2859 12 1 5.2952 -4.1467 0.0005 13 1 3.2328 -3.5556 1.1307 14 6 4.2882 1.3999 -2.4130 15 6 3.0650 1.5250 -3.2843 16 6 2.4602 2.7556 -3.4524 17 6 1.3257 2.8466 -4.2668 18 8 0.7684 3.9197 -4.4360 19 7 0.8577 1.7294 -4.8634 20 6 -0.2459 1.8019 -5.6586 21 6 -0.7338 0.6960 -6.2665 22 17 -2.1420 0.8117 -7.2751 23 6 -0.1039 -0.5440 -6.0834 24 6 1.0006 -0.6260 -5.2896 25 6 1.4927 0.5352 -4.6661 26 7 2.5717 0.4558 -3.8890 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8900 30 1 1.6886 1.8463 0.8901 31 1 1.6886 1.8464 -0.8899 32 1 3.8508 0.5684 0.8426 33 1 3.9785 2.1764 0.0902 34 1 5.4668 -1.4569 1.5093 35 1 5.0958 0.9417 -2.9841 36 1 4.5973 2.3895 -2.0764 37 1 2.8592 3.6339 -2.9669 38 1 -0.7369 2.7525 -5.8054 39 1 -0.4922 -1.4279 -6.5675 40 1 1.4949 -1.5748 -5.1410 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459537629.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:39:51 Heat of formation + Delta-G solvation = 27.184818 kcal Electronic energy + Delta-G solvation = -27583.343509 eV Core-core repulsion = 23619.800094 eV Total energy + Delta-G solvation = -3963.543415 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.58379 -38.46910 -37.82979 -37.17801 -36.73326 -35.11268 -33.98441 -32.07106 -30.86131 -29.73800 -29.05072 -26.58020 -25.69834 -25.13418 -23.95399 -23.29190 -22.16260 -20.43315 -19.08716 -18.45291 -17.62465 -16.76230 -16.49155 -16.16097 -15.77166 -15.50460 -15.05834 -14.79357 -14.62213 -14.09872 -14.04806 -13.71017 -13.66251 -13.54694 -13.16603 -12.86136 -12.72933 -12.47064 -11.94522 -11.80072 -11.46873 -11.43903 -11.12197 -10.84674 -10.78595 -10.68212 -10.62533 -10.23831 -10.14935 -9.95924 -9.74686 -9.63399 -9.22558 -8.81019 -8.39394 -7.66426 -6.65195 -5.71643 -3.22878 0.06658 0.37593 1.39874 2.08049 2.32121 2.49257 3.46370 3.54692 3.57998 3.88544 3.98189 4.14477 4.27045 4.51134 4.58757 4.66939 4.77523 5.15042 5.34770 5.36747 5.43699 5.53870 5.60145 5.71335 5.74069 5.76129 5.86502 5.98650 6.03196 6.12756 6.23286 6.26175 6.41872 6.54814 6.59735 6.64121 6.67947 7.64607 7.79061 7.98373 8.03997 8.06978 8.56514 9.22742 9.86322 10.35935 11.31762 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.013960 B = 0.004015 C = 0.003688 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2005.286093 B = 6971.521031 C = 7591.198211 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.351 6.351 3 C 0.046 3.954 4 C 0.136 3.864 5 N -0.559 5.559 6 C -0.233 4.233 7 H 0.072 0.928 8 C 0.015 3.985 9 N -0.894 5.894 10 Si 0.900 3.100 11 H -0.277 1.277 12 H -0.296 1.296 13 H -0.291 1.291 14 C 0.180 3.820 15 C 0.215 3.785 16 C -0.334 4.334 17 C 0.507 3.493 18 O -0.550 6.550 19 N -0.427 5.427 20 C 0.110 3.890 21 C -0.093 4.093 22 Cl -0.039 7.039 23 C -0.051 4.051 24 C -0.101 4.101 25 C 0.372 3.628 26 N -0.484 5.484 27 H 0.021 0.979 28 H 0.075 0.925 29 H 0.027 0.973 30 H 0.025 0.975 31 H 0.024 0.976 32 H 0.114 0.886 33 H 0.043 0.957 34 H 0.252 0.748 35 H 0.077 0.923 36 H 0.065 0.935 37 H 0.154 0.846 38 H 0.183 0.817 39 H 0.157 0.843 40 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.052 2.682 -12.349 16.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.268 6.268 3 C -0.033 4.033 4 C 0.009 3.991 5 N -0.276 5.276 6 C -0.362 4.362 7 H 0.089 0.911 8 C -0.183 4.183 9 N -0.538 5.538 10 Si 0.730 3.270 11 H -0.202 1.202 12 H -0.223 1.223 13 H -0.217 1.217 14 C 0.051 3.949 15 C 0.084 3.916 16 C -0.359 4.359 17 C 0.315 3.685 18 O -0.432 6.432 19 N -0.133 5.133 20 C -0.014 4.014 21 C -0.124 4.124 22 Cl -0.010 7.010 23 C -0.075 4.075 24 C -0.121 4.121 25 C 0.127 3.873 26 N -0.205 5.205 27 H 0.040 0.960 28 H 0.093 0.907 29 H 0.045 0.955 30 H 0.043 0.957 31 H 0.042 0.958 32 H 0.131 0.869 33 H 0.061 0.939 34 H 0.062 0.938 35 H 0.095 0.905 36 H 0.083 0.917 37 H 0.172 0.828 38 H 0.200 0.800 39 H 0.175 0.825 40 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges -10.687 2.509 -12.046 16.298 hybrid contribution -1.406 0.183 0.014 1.417 sum -12.093 2.691 -12.031 17.270 Atomic orbital electron populations 1.22592 0.84470 1.01341 0.98135 1.88220 1.16285 1.27539 1.94778 1.23419 0.98929 0.84152 0.96812 1.21242 0.87487 0.97004 0.93340 1.43687 1.74559 1.03224 1.06119 1.19084 1.38126 0.80784 0.98188 0.91057 1.24928 0.97132 0.97689 0.98573 1.69975 1.36672 1.36125 1.11050 0.86285 0.77546 0.85422 0.77718 1.20209 1.22337 1.21735 1.20016 0.89595 0.96312 0.88970 1.23479 0.95714 0.86331 0.86096 1.22688 1.00897 1.01093 1.11233 1.17326 0.86852 0.82130 0.82173 1.90949 1.61539 1.25601 1.65063 1.44492 1.21819 1.11837 1.35111 1.21930 0.88190 1.00790 0.90524 1.20130 0.95284 0.94440 1.02497 1.98395 1.37677 1.98374 1.66563 1.21305 0.93637 0.96689 0.95892 1.21051 0.96702 0.97580 0.96758 1.20997 0.89391 0.84339 0.92611 1.69062 1.09443 1.30408 1.11623 0.96006 0.90690 0.95451 0.95722 0.95809 0.86851 0.93909 0.93848 0.90451 0.91710 0.82822 0.79971 0.82491 0.80704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.57 11.01 101.05 1.11 1.68 16 2 O -0.35 -7.85 10.18 -35.23 -0.36 -8.21 16 3 C 0.05 0.95 6.28 37.16 0.23 1.19 16 4 C 0.14 3.05 5.77 -4.04 -0.02 3.03 16 5 N -0.56 -12.98 2.42 -174.62 -0.42 -13.40 16 6 C -0.23 -6.04 8.89 -15.06 -0.13 -6.18 16 7 H 0.07 1.90 7.84 -52.49 -0.41 1.49 16 8 C 0.02 0.41 4.94 -17.43 -0.09 0.33 16 9 N -0.89 -25.01 11.33 55.49 0.63 -24.38 16 10 Si 0.90 21.90 29.61 -169.99 -5.03 16.86 16 11 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 12 H -0.30 -7.20 7.11 56.52 0.40 -6.80 16 13 H -0.29 -7.23 7.11 56.52 0.40 -6.83 16 14 C 0.18 3.50 6.11 -5.20 -0.03 3.47 16 15 C 0.22 3.95 5.87 -82.40 -0.48 3.47 16 16 C -0.33 -5.79 9.39 -38.97 -0.37 -6.16 16 17 C 0.51 8.87 7.36 -15.51 -0.11 8.75 16 18 O -0.55 -10.58 16.69 4.83 0.08 -10.50 16 19 N -0.43 -6.43 2.76 -65.34 -0.18 -6.61 16 20 C 0.11 1.33 9.84 -16.65 -0.16 1.17 16 21 C -0.09 -0.91 6.28 -39.86 -0.25 -1.16 16 22 Cl -0.04 -0.32 28.94 -51.86 -1.50 -1.83 16 23 C -0.05 -0.45 9.87 -39.53 -0.39 -0.84 16 24 C -0.10 -1.15 9.96 -39.37 -0.39 -1.54 16 25 C 0.37 5.66 7.33 -155.95 -1.14 4.52 16 26 N -0.48 -8.80 10.06 -8.56 -0.09 -8.88 16 27 H 0.02 0.37 8.14 -51.93 -0.42 -0.06 16 28 H 0.07 1.21 8.14 -51.93 -0.42 0.78 16 29 H 0.03 0.43 8.14 -51.93 -0.42 0.00 16 30 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 31 H 0.02 0.49 7.32 -51.93 -0.38 0.11 16 32 H 0.11 2.96 5.32 -51.93 -0.28 2.68 16 33 H 0.04 0.87 7.87 -51.93 -0.41 0.46 16 34 H 0.25 6.87 8.31 -40.82 -0.34 6.53 16 35 H 0.08 1.52 8.07 -51.93 -0.42 1.10 16 36 H 0.06 1.12 7.61 -51.93 -0.40 0.72 16 37 H 0.15 2.48 7.97 -52.49 -0.42 2.06 16 38 H 0.18 2.09 7.34 -52.49 -0.39 1.70 16 39 H 0.16 0.89 8.06 -52.48 -0.42 0.47 16 40 H 0.18 1.78 8.06 -52.48 -0.42 1.35 16 LS Contribution 358.55 15.07 5.40 5.40 Total: -1.00 -31.77 358.55 -8.47 -40.24 By element: Atomic # 1 Polarization: 4.36 SS G_CDS: -4.77 Total: -0.40 kcal Atomic # 6 Polarization: 13.94 SS G_CDS: -2.23 Total: 11.71 kcal Atomic # 7 Polarization: -53.21 SS G_CDS: -0.06 Total: -53.27 kcal Atomic # 8 Polarization: -18.43 SS G_CDS: -0.28 Total: -18.71 kcal Atomic # 14 Polarization: 21.90 SS G_CDS: -5.03 Total: 16.86 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -1.50 Total: -1.83 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -31.77 -8.47 -40.24 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459537629.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.420 kcal (2) G-P(sol) polarization free energy of solvation -31.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.235 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds