Wall clock time and date at job start Tue Mar 31 2020 20:40:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42895 * 113.99853 * 2 1 4 4 C 1.53001 * 109.47310 * 179.97438 * 3 2 1 5 5 N 1.46504 * 109.46795 * 65.00075 * 4 3 2 6 6 C 1.36932 * 119.99862 * 270.00142 * 5 4 3 7 7 H 1.07999 * 119.99890 * 142.57363 * 6 5 4 8 8 C 1.38810 * 120.00206 * 322.56932 * 6 5 4 9 9 N 1.31617 * 120.00064 * 157.37311 * 8 6 5 10 10 Si 1.86797 * 119.99934 * 337.37647 * 8 6 5 11 11 H 1.48494 * 109.47191 * 95.36786 * 10 8 6 12 12 H 1.48504 * 109.46920 * 215.36832 * 10 8 6 13 13 H 1.48502 * 109.47192 * 335.36622 * 10 8 6 14 14 C 1.46505 * 120.00081 * 89.99977 * 5 4 3 15 15 C 1.50699 * 109.46871 * 270.13794 * 14 5 4 16 16 N 1.30368 * 126.18823 * 89.69358 * 15 14 5 17 17 N 1.28664 * 109.52861 * 179.97438 * 16 15 14 18 18 C 1.31239 * 109.24938 * 359.97438 * 17 16 15 19 19 C 1.47834 * 126.38112 * 179.97438 * 18 17 16 20 20 C 1.39574 * 120.13050 * 179.74973 * 19 18 17 21 21 C 1.37936 * 119.86513 * 179.79131 * 20 19 18 22 22 C 1.38476 * 120.13103 * 0.49040 * 21 20 19 23 23 Cl 1.73602 * 119.86751 * 179.76660 * 22 21 20 24 24 C 1.38480 * 120.26624 * 359.73952 * 22 21 20 25 25 C 1.37938 * 120.12421 * 0.02562 * 24 22 21 26 26 O 1.34422 * 126.18466 * 269.68252 * 15 14 5 27 27 H 1.09005 * 109.46724 * 179.97438 * 1 2 3 28 28 H 1.08989 * 109.47654 * 300.00351 * 1 2 3 29 29 H 1.08998 * 109.46763 * 60.00693 * 1 2 3 30 30 H 1.09003 * 109.46960 * 59.99489 * 3 2 1 31 31 H 1.09000 * 109.47552 * 299.99921 * 3 2 1 32 32 H 1.08997 * 109.47248 * 305.00360 * 4 3 2 33 33 H 1.09001 * 109.47256 * 184.99668 * 4 3 2 34 34 H 0.97003 * 120.00195 * 180.02562 * 9 8 6 35 35 H 1.08993 * 109.47338 * 150.13249 * 14 5 4 36 36 H 1.09000 * 109.46600 * 30.13466 * 14 5 4 37 37 H 1.07992 * 120.06419 * 0.02733 * 20 19 18 38 38 H 1.07999 * 119.92725 * 180.22951 * 21 20 19 39 39 H 1.08001 * 119.93704 * 180.02562 * 24 22 21 40 40 H 1.08000 * 120.05791 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5355 1.1847 0.0006 5 7 3.9767 0.5640 -1.2509 6 6 4.0978 -0.7974 -1.3345 7 1 3.8254 -1.3088 -2.2459 8 6 4.5708 -1.5201 -0.2479 9 7 4.2853 -2.7999 -0.1342 10 14 5.6123 -0.6763 1.0531 11 1 4.7449 -0.2451 2.1785 12 1 6.6402 -1.6233 1.5550 13 1 6.2799 0.5101 0.4598 14 6 4.2882 1.3999 -2.4131 15 6 3.0432 1.5954 -3.2394 16 7 2.1701 2.5536 -3.1011 17 7 1.2352 2.4128 -3.9738 18 6 1.4823 1.3516 -4.7052 19 6 0.6528 0.8404 -5.8170 20 6 1.0436 -0.3039 -6.5141 21 6 0.2633 -0.7785 -7.5478 22 6 -0.9004 -0.1163 -7.9009 23 17 -1.8742 -0.7163 -9.2069 24 6 -1.2909 1.0222 -7.2161 25 6 -0.5212 1.5035 -6.1775 26 8 2.6323 0.8134 -4.2526 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8898 29 1 -0.3633 0.5137 -0.8900 30 1 1.6885 1.8464 0.8900 31 1 1.6886 1.8464 -0.8900 32 1 3.8508 0.5685 0.8426 33 1 3.9784 2.1766 0.0902 34 1 4.6155 -3.3049 0.6254 35 1 5.0525 0.9116 -3.0175 36 1 4.6561 2.3688 -2.0755 37 1 1.9532 -0.8187 -6.2422 38 1 0.5629 -1.6660 -8.0854 39 1 -2.1998 1.5342 -7.4957 40 1 -0.8270 2.3913 -5.6439 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459538795.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:40:05 Heat of formation + Delta-G solvation = 48.855086 kcal Electronic energy + Delta-G solvation = -26727.021320 eV Core-core repulsion = 22764.417599 eV Total energy + Delta-G solvation = -3962.603721 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -43.67867 -39.48120 -37.49679 -36.79643 -35.79337 -35.71329 -32.79019 -31.78032 -31.45099 -30.34921 -28.88577 -26.65134 -25.72054 -24.19616 -23.59255 -22.90875 -21.93149 -21.63897 -20.76122 -18.00475 -17.06808 -16.80330 -16.70081 -16.01717 -15.94198 -15.65609 -15.29566 -14.81636 -14.44870 -14.38442 -14.15544 -13.86962 -13.85256 -13.68516 -13.00942 -12.43473 -12.35558 -12.14008 -12.04714 -11.97030 -11.89712 -11.63829 -11.47883 -11.36252 -11.12791 -11.07177 -10.73622 -10.68101 -10.44905 -9.93531 -9.85914 -9.66969 -9.40359 -8.88493 -8.67939 -8.36250 -7.18869 -6.05036 -3.52320 0.32697 0.97543 1.78061 1.81234 2.56978 2.72724 3.27503 3.41192 3.42975 3.43732 4.00357 4.44112 4.45202 4.54127 4.54890 4.74356 4.82125 4.92278 5.01560 5.29151 5.29898 5.44902 5.52752 5.66669 5.70445 5.77501 5.85282 5.87957 5.92768 5.96531 5.99626 6.03507 6.12037 6.13410 6.15969 6.24191 6.25876 6.36135 6.65224 7.81535 8.00942 8.25364 8.65604 8.78187 9.59165 9.85995 11.09338 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.016875 B = 0.002950 C = 0.002877 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1658.836115 B = 9489.297793 C = 9730.381639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.038 3.962 4 C 0.129 3.871 5 N -0.572 5.572 6 C -0.278 4.278 7 H 0.078 0.922 8 C 0.056 3.944 9 N -0.885 5.885 10 Si 0.875 3.125 11 H -0.284 1.284 12 H -0.299 1.299 13 H -0.267 1.267 14 C 0.222 3.778 15 C 0.191 3.809 16 N -0.308 5.308 17 N -0.273 5.273 18 C 0.170 3.830 19 C -0.001 4.001 20 C -0.073 4.073 21 C -0.109 4.109 22 C -0.022 4.022 23 Cl -0.067 7.067 24 C -0.112 4.112 25 C -0.063 4.063 26 O -0.210 6.210 27 H 0.078 0.922 28 H 0.028 0.972 29 H 0.026 0.974 30 H 0.030 0.970 31 H 0.051 0.949 32 H 0.069 0.931 33 H 0.063 0.937 34 H 0.264 0.736 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.145 0.855 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.198 7.697 -12.639 16.918 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.268 6.268 3 C -0.041 4.041 4 C 0.004 3.996 5 N -0.292 5.292 6 C -0.405 4.405 7 H 0.096 0.904 8 C -0.147 4.147 9 N -0.523 5.523 10 Si 0.705 3.295 11 H -0.212 1.212 12 H -0.227 1.227 13 H -0.192 1.192 14 C 0.090 3.910 15 C -0.022 4.022 16 N -0.155 5.155 17 N -0.122 5.122 18 C -0.038 4.038 19 C -0.003 4.003 20 C -0.093 4.093 21 C -0.128 4.128 22 C -0.049 4.049 23 Cl -0.038 7.038 24 C -0.130 4.130 25 C -0.082 4.082 26 O -0.088 6.088 27 H 0.096 0.904 28 H 0.046 0.954 29 H 0.045 0.955 30 H 0.048 0.952 31 H 0.069 0.931 32 H 0.087 0.913 33 H 0.081 0.919 34 H 0.074 0.926 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.163 0.837 38 H 0.160 0.840 39 H 0.160 0.840 40 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -8.663 8.324 -12.132 17.074 hybrid contribution 0.476 -0.582 0.356 0.832 sum -8.187 7.742 -11.777 16.299 Atomic orbital electron populations 1.22611 0.83694 1.01726 0.98337 1.88257 1.17016 1.26585 1.94902 1.23270 0.96780 0.85220 0.98824 1.21529 0.90914 0.96990 0.90173 1.44144 1.74318 1.04158 1.06537 1.18565 1.40354 0.79067 1.02535 0.90409 1.25240 0.97167 0.94816 0.97456 1.69879 1.43668 1.08367 1.30431 0.86979 0.80897 0.79531 0.82069 1.21153 1.22730 1.19166 1.19684 0.85687 0.97670 0.87931 1.30986 1.00834 0.84550 0.85797 1.74298 1.00728 1.22630 1.17878 1.74531 1.19716 1.14687 1.03247 1.25155 0.86981 0.92729 0.98971 1.17317 0.93929 0.96512 0.92526 1.21318 0.99960 0.94287 0.93746 1.20982 0.93308 1.00607 0.97862 1.21137 0.94200 0.96678 0.92909 1.98381 1.70309 1.87635 1.47521 1.20967 1.00853 0.95445 0.95755 1.21131 0.91967 0.99539 0.95582 1.84938 1.33598 1.49144 1.41082 0.90361 0.95378 0.95518 0.95153 0.93093 0.91342 0.91870 0.92568 0.88565 0.88669 0.83749 0.83983 0.84001 0.83470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.62 11.01 101.05 1.11 1.74 16 2 O -0.35 -8.14 10.18 -35.23 -0.36 -8.50 16 3 C 0.04 0.78 6.28 37.16 0.23 1.02 16 4 C 0.13 2.71 4.98 -4.04 -0.02 2.69 16 5 N -0.57 -12.78 2.04 -174.61 -0.36 -13.13 16 6 C -0.28 -7.39 9.42 -15.06 -0.14 -7.53 16 7 H 0.08 2.29 8.06 -52.49 -0.42 1.87 16 8 C 0.06 1.54 5.30 -17.43 -0.09 1.45 16 9 N -0.88 -26.27 13.97 55.49 0.78 -25.50 16 10 Si 0.88 21.06 25.06 -169.99 -4.26 16.80 16 11 H -0.28 -6.77 6.66 56.52 0.38 -6.39 16 12 H -0.30 -7.35 7.11 56.52 0.40 -6.95 16 13 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 14 C 0.22 4.03 6.33 -5.19 -0.03 4.00 16 15 C 0.19 3.63 7.65 -12.90 -0.10 3.54 16 16 N -0.31 -5.91 10.79 32.58 0.35 -5.56 16 17 N -0.27 -5.02 11.92 32.07 0.38 -4.64 16 18 C 0.17 2.93 7.99 -13.88 -0.11 2.82 16 19 C 0.00 -0.01 5.87 -104.98 -0.62 -0.63 16 20 C -0.07 -0.88 9.73 -39.19 -0.38 -1.26 16 21 C -0.11 -1.10 9.81 -39.60 -0.39 -1.49 16 22 C -0.02 -0.22 6.32 -39.40 -0.25 -0.47 16 23 Cl -0.07 -0.60 28.95 -51.86 -1.50 -2.10 16 24 C -0.11 -1.06 9.81 -39.60 -0.39 -1.45 16 25 C -0.06 -0.71 9.70 -39.19 -0.38 -1.09 16 26 O -0.21 -3.98 10.67 4.02 0.04 -3.93 16 27 H 0.08 1.37 8.14 -51.93 -0.42 0.95 16 28 H 0.03 0.45 8.14 -51.94 -0.42 0.03 16 29 H 0.03 0.48 8.14 -51.93 -0.42 0.06 16 30 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 31 H 0.05 1.05 6.19 -51.93 -0.32 0.73 16 32 H 0.07 1.59 3.27 -51.93 -0.17 1.42 16 33 H 0.06 1.11 7.89 -51.93 -0.41 0.70 16 34 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 35 H 0.10 1.63 8.04 -51.93 -0.42 1.21 16 36 H 0.10 1.44 7.90 -51.93 -0.41 1.03 16 37 H 0.14 1.71 7.93 -52.49 -0.42 1.30 16 38 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 39 H 0.14 1.02 8.06 -52.49 -0.42 0.59 16 40 H 0.15 1.58 7.86 -52.49 -0.41 1.17 16 LS Contribution 358.79 15.07 5.41 5.41 Total: -1.00 -32.04 358.79 -5.75 -37.79 By element: Atomic # 1 Polarization: 4.71 SS G_CDS: -4.68 Total: 0.03 kcal Atomic # 6 Polarization: 4.88 SS G_CDS: -1.55 Total: 3.33 kcal Atomic # 7 Polarization: -49.98 SS G_CDS: 1.15 Total: -48.83 kcal Atomic # 8 Polarization: -12.12 SS G_CDS: -0.32 Total: -12.43 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -4.26 Total: 16.80 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.50 Total: -2.10 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -32.04 -5.75 -37.79 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459538795.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.646 kcal (2) G-P(sol) polarization free energy of solvation -32.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.791 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.855 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds