Wall clock time and date at job start Tue Mar 31 2020 20:40:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42902 * 113.99659 * 2 1 4 4 C 1.53008 * 109.47132 * 179.97438 * 3 2 1 5 5 N 1.46504 * 109.46652 * 65.00225 * 4 3 2 6 6 C 1.36933 * 120.00115 * 264.83521 * 5 4 3 7 7 H 1.08005 * 119.99829 * 8.70433 * 6 5 4 8 8 C 1.38812 * 120.00291 * 188.70183 * 6 5 4 9 9 N 1.31615 * 119.99713 * 24.98065 * 8 6 5 10 10 Si 1.86802 * 120.00107 * 204.98569 * 8 6 5 11 11 H 1.48495 * 109.47083 * 59.99597 * 10 8 6 12 12 H 1.48493 * 109.46895 * 179.97438 * 10 8 6 13 13 H 1.48498 * 109.47181 * 299.99928 * 10 8 6 14 14 C 1.46499 * 119.99852 * 84.84033 * 5 4 3 15 15 C 1.50700 * 109.47380 * 89.99783 * 14 5 4 16 16 O 1.21283 * 119.99739 * 359.97438 * 15 14 5 17 17 N 1.34772 * 120.00398 * 179.97438 * 15 14 5 18 18 C 1.39399 * 120.00380 * 184.44264 * 17 15 14 19 19 C 1.38742 * 120.15524 * 331.63847 * 18 17 15 20 20 C 1.38211 * 120.06723 * 179.97438 * 19 18 17 21 21 Cl 1.73595 * 119.81202 * 179.97438 * 20 19 18 22 22 C 1.38681 * 120.37484 * 0.02562 * 20 19 18 23 23 C 1.37783 * 120.31528 * 359.67038 * 22 20 19 24 24 C 1.39723 * 119.92421 * 0.62985 * 23 22 20 25 25 C 1.43199 * 120.18350 * 179.67460 * 24 23 22 26 26 N 9.18808 * 123.80376 * 294.01564 * 2 1 3 27 27 H 1.08999 * 109.47123 * 60.00045 * 1 2 3 28 28 H 1.09000 * 109.46615 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47229 * 299.99436 * 1 2 3 30 30 H 1.08999 * 109.47073 * 60.00193 * 3 2 1 31 31 H 1.08993 * 109.47467 * 299.99756 * 3 2 1 32 32 H 1.08993 * 109.47164 * 305.00711 * 4 3 2 33 33 H 1.08994 * 109.47079 * 185.00389 * 4 3 2 34 34 H 0.97004 * 120.00019 * 179.97438 * 9 8 6 35 35 H 1.09002 * 109.47257 * 329.99800 * 14 5 4 36 36 H 1.09006 * 109.47086 * 209.99569 * 14 5 4 37 37 H 0.97008 * 119.99686 * 4.44032 * 17 15 14 38 38 H 1.08002 * 119.96669 * 359.97438 * 19 18 17 39 39 H 1.08007 * 119.84010 * 179.97438 * 22 20 19 40 40 H 1.08001 * 120.03624 * 180.32454 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1848 0.0006 5 7 3.9766 0.5641 -1.2510 6 6 4.1997 -0.7858 -1.3044 7 1 3.9181 -1.4130 -0.4714 8 6 4.7876 -1.3483 -2.4290 9 7 5.5598 -0.6162 -3.2036 10 14 4.4825 -3.1441 -2.8433 11 1 3.0287 -3.3643 -3.0503 12 1 5.2179 -3.4977 -4.0839 13 1 4.9581 -3.9977 -1.7250 14 6 4.1793 1.3879 -2.4454 15 6 5.6034 1.8793 -2.4810 16 8 6.3733 1.5721 -1.5956 17 7 6.0217 2.6601 -3.4968 18 6 7.3608 3.0384 -3.5794 19 6 8.1256 3.1511 -2.4273 20 6 9.4533 3.5258 -2.5114 21 17 10.4040 3.6653 -1.0656 22 6 10.0301 3.7920 -3.7442 23 6 9.2868 3.6789 -4.8988 24 6 7.9417 3.3072 -4.8282 25 6 7.1621 3.1947 -6.0241 26 7 6.5408 3.1073 -6.9739 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3632 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8900 30 1 1.6885 1.8464 0.8900 31 1 1.6886 1.8464 -0.8899 32 1 3.8508 0.5686 0.8426 33 1 3.9784 2.1766 0.0903 34 1 5.9710 -1.0093 -3.9894 35 1 3.5012 2.2409 -2.4178 36 1 3.9781 0.7923 -3.3359 37 1 5.3908 2.9589 -4.1704 38 1 7.6831 2.9458 -1.4638 39 1 11.0683 4.0845 -3.7999 40 1 9.7419 3.8822 -5.8569 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459538831.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:40:38 Heat of formation + Delta-G solvation = 11.085182 kcal Electronic energy + Delta-G solvation = -26734.457867 eV Core-core repulsion = 22770.216320 eV Total energy + Delta-G solvation = -3964.241547 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -40.20068 -38.25230 -37.35977 -36.69208 -35.94924 -35.25350 -33.95973 -31.61772 -30.99105 -30.05392 -28.75189 -26.77747 -25.84319 -23.74118 -23.54214 -22.72873 -20.78106 -19.68352 -18.93595 -17.50835 -16.81211 -16.31819 -15.91833 -15.55685 -15.26751 -15.22674 -14.74476 -14.41530 -14.18994 -13.91775 -13.75913 -13.40667 -13.20160 -13.07222 -12.92196 -12.88862 -12.76223 -12.11345 -11.94596 -11.70388 -11.61111 -11.36317 -11.25868 -11.02624 -10.91415 -10.82290 -10.53535 -10.45900 -10.13413 -9.93875 -9.80421 -9.11111 -8.97885 -8.68595 -8.37609 -7.84011 -7.04010 -5.87082 -3.09830 0.72996 1.39737 2.15260 2.74789 2.97937 3.42413 3.48657 3.49966 3.55283 3.72097 3.99354 4.13228 4.38150 4.51954 4.81720 5.11178 5.21820 5.31368 5.36431 5.43220 5.55625 5.62716 5.67619 5.84597 5.90508 5.94662 5.98163 6.04163 6.06699 6.24166 6.29056 6.33733 6.45163 6.54710 6.75971 6.97552 7.16609 7.59073 7.74131 7.83114 7.99059 8.23255 9.09563 9.24443 9.76455 10.17448 11.24849 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.011101 B = 0.003709 C = 0.003448 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2521.631080 B = 7548.082921 C = 8117.608206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.365 6.365 3 C 0.044 3.956 4 C 0.148 3.852 5 N -0.562 5.562 6 C -0.225 4.225 7 H 0.082 0.918 8 C -0.006 4.006 9 N -0.909 5.909 10 Si 0.904 3.096 11 H -0.286 1.286 12 H -0.294 1.294 13 H -0.285 1.285 14 C 0.164 3.836 15 C 0.527 3.473 16 O -0.495 6.495 17 N -0.682 5.682 18 C 0.250 3.750 19 C -0.133 4.133 20 C 0.016 3.984 21 Cl -0.066 7.066 22 C -0.155 4.155 23 C -0.037 4.037 24 C -0.085 4.085 25 C 0.262 3.738 26 N -0.423 5.423 27 H 0.032 0.968 28 H 0.077 0.923 29 H 0.029 0.971 30 H 0.033 0.967 31 H 0.038 0.962 32 H 0.063 0.937 33 H 0.053 0.947 34 H 0.254 0.746 35 H 0.042 0.958 36 H 0.110 0.890 37 H 0.402 0.598 38 H 0.170 0.830 39 H 0.137 0.863 40 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.084 12.070 1.004 12.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C -0.036 4.036 4 C 0.021 3.979 5 N -0.280 5.280 6 C -0.353 4.353 7 H 0.100 0.900 8 C -0.201 4.201 9 N -0.556 5.556 10 Si 0.735 3.265 11 H -0.213 1.213 12 H -0.221 1.221 13 H -0.212 1.212 14 C 0.033 3.967 15 C 0.316 3.684 16 O -0.366 6.366 17 N -0.325 5.325 18 C 0.146 3.854 19 C -0.154 4.154 20 C -0.012 4.012 21 Cl -0.037 7.037 22 C -0.175 4.175 23 C -0.058 4.058 24 C -0.092 4.092 25 C -0.053 4.053 26 N -0.099 5.099 27 H 0.051 0.949 28 H 0.096 0.904 29 H 0.047 0.953 30 H 0.051 0.949 31 H 0.056 0.944 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.064 0.936 35 H 0.059 0.941 36 H 0.128 0.872 37 H 0.237 0.763 38 H 0.187 0.813 39 H 0.155 0.845 40 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.808 11.345 0.279 11.491 hybrid contribution -0.089 -0.704 -0.350 0.791 sum 1.719 10.640 -0.070 10.778 Atomic orbital electron populations 1.22643 0.83300 1.01855 0.98736 1.88110 1.17506 1.27669 1.94977 1.23393 0.97719 0.84520 0.97950 1.20845 0.89568 0.97236 0.90249 1.43830 1.74886 1.04530 1.04746 1.19237 1.32714 0.81462 1.01930 0.90043 1.24632 0.98112 0.98003 0.99402 1.69763 1.31566 1.36134 1.18120 0.86294 0.77779 0.85066 0.77370 1.21288 1.22063 1.21156 1.20766 0.88229 0.93553 0.94149 1.22907 0.93517 0.73130 0.78871 1.90470 1.55483 1.53043 1.37600 1.44378 1.06258 1.51083 1.30774 1.17708 0.86148 0.90619 0.90888 1.21461 0.92269 1.01244 1.00456 1.20992 0.92309 1.00142 0.87757 1.98371 1.71720 1.96165 1.37483 1.20740 1.00860 1.05758 0.90099 1.20776 0.90710 0.95677 0.98625 1.15863 0.93199 1.13996 0.86160 1.25557 0.93543 0.93251 0.92933 1.81332 1.08227 1.09810 1.10568 0.94892 0.90433 0.95284 0.94899 0.94386 0.91869 0.92884 0.93571 0.94053 0.87243 0.76306 0.81256 0.84506 0.84395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 11.01 101.05 1.11 1.56 16 2 O -0.36 -6.82 10.42 -35.23 -0.37 -7.18 16 3 C 0.04 0.72 6.28 37.16 0.23 0.96 16 4 C 0.15 2.85 6.07 -4.04 -0.02 2.83 16 5 N -0.56 -12.90 1.98 -174.60 -0.34 -13.25 16 6 C -0.22 -5.90 9.44 -15.06 -0.14 -6.04 16 7 H 0.08 2.20 7.94 -52.48 -0.42 1.78 16 8 C -0.01 -0.15 4.89 -17.43 -0.09 -0.23 16 9 N -0.91 -24.61 8.96 55.49 0.50 -24.12 16 10 Si 0.90 21.96 29.62 -169.99 -5.04 16.93 16 11 H -0.29 -6.93 7.11 56.52 0.40 -6.52 16 12 H -0.29 -7.30 7.11 56.52 0.40 -6.90 16 13 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 14 C 0.16 3.45 5.45 -5.19 -0.03 3.42 16 15 C 0.53 11.00 5.76 -10.99 -0.06 10.94 16 16 O -0.50 -11.94 13.19 5.56 0.07 -11.87 16 17 N -0.68 -11.74 5.11 -9.67 -0.05 -11.79 16 18 C 0.25 4.04 6.42 -83.45 -0.54 3.51 16 19 C -0.13 -2.17 8.52 -39.40 -0.34 -2.51 16 20 C 0.02 0.22 6.32 -39.43 -0.25 -0.03 16 21 Cl -0.07 -0.86 28.94 -51.86 -1.50 -2.36 16 22 C -0.15 -1.75 9.80 -39.58 -0.39 -2.13 16 23 C -0.04 -0.41 9.75 -39.19 -0.38 -0.80 16 24 C -0.08 -1.19 5.75 -106.63 -0.61 -1.81 16 25 C 0.26 3.94 14.31 -22.40 -0.32 3.62 16 26 N -0.42 -7.03 18.55 41.93 0.78 -6.25 16 27 H 0.03 0.43 8.14 -51.93 -0.42 0.01 16 28 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 29 H 0.03 0.34 8.14 -51.93 -0.42 -0.08 16 30 H 0.03 0.46 8.14 -51.93 -0.42 0.04 16 31 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 32 H 0.06 1.28 8.00 -51.93 -0.42 0.86 16 33 H 0.05 0.93 8.11 -51.93 -0.42 0.51 16 34 H 0.25 6.99 8.31 -40.82 -0.34 6.65 16 35 H 0.04 0.72 8.07 -51.93 -0.42 0.30 16 36 H 0.11 2.55 6.31 -51.93 -0.33 2.22 16 37 H 0.40 6.06 7.99 -40.82 -0.33 5.73 16 38 H 0.17 3.15 5.71 -52.49 -0.30 2.85 16 39 H 0.14 1.18 8.06 -52.48 -0.42 0.76 16 40 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 LS Contribution 365.14 15.07 5.50 5.50 Total: -1.00 -30.97 365.14 -6.99 -37.96 By element: Atomic # 1 Polarization: 7.86 SS G_CDS: -4.72 Total: 3.14 kcal Atomic # 6 Polarization: 15.11 SS G_CDS: -1.82 Total: 13.29 kcal Atomic # 7 Polarization: -56.29 SS G_CDS: 0.88 Total: -55.40 kcal Atomic # 8 Polarization: -18.76 SS G_CDS: -0.29 Total: -19.05 kcal Atomic # 14 Polarization: 21.96 SS G_CDS: -5.04 Total: 16.93 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.50 Total: -2.36 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -30.97 -6.99 -37.96 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459538831.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.045 kcal (2) G-P(sol) polarization free energy of solvation -30.970 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.960 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds