Wall clock time and date at job start Tue Mar 31 2020 20:40:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42906 * 113.99622 * 2 1 4 4 C 1.53002 * 109.46889 * 179.97438 * 3 2 1 5 5 N 1.46494 * 109.47024 * 64.99683 * 4 3 2 6 6 C 1.36941 * 120.00243 * 271.08322 * 5 4 3 7 7 H 1.07999 * 119.99834 * 146.13506 * 6 5 4 8 8 C 1.38809 * 120.00188 * 326.14111 * 6 5 4 9 9 N 1.31627 * 119.99614 * 336.79294 * 8 6 5 10 10 Si 1.86798 * 120.00255 * 156.79379 * 8 6 5 11 11 H 1.48501 * 109.47030 * 359.97438 * 10 8 6 12 12 H 1.48500 * 109.47278 * 119.99754 * 10 8 6 13 13 H 1.48500 * 109.47326 * 240.00259 * 10 8 6 14 14 C 1.46498 * 120.00089 * 91.08957 * 5 4 3 15 15 C 1.50713 * 109.46963 * 269.99920 * 14 5 4 16 16 N 1.30971 * 126.43371 * 89.99950 * 15 14 5 17 17 C 1.35225 * 105.57317 * 180.02562 * 16 15 14 18 18 C 1.48401 * 126.41386 * 179.97438 * 17 16 15 19 19 C 1.39344 * 120.10614 * 359.71715 * 18 17 16 20 20 C 1.37987 * 119.89223 * 179.79315 * 19 18 17 21 21 C 1.38453 * 120.10600 * 0.48595 * 20 19 18 22 22 Cl 1.73600 * 119.88992 * 179.76813 * 21 20 19 23 23 C 1.38442 * 120.21453 * 359.74317 * 21 20 19 24 24 C 1.37987 * 120.10762 * 0.02577 * 23 21 20 25 25 N 1.30774 * 107.17111 * 359.97438 * 17 16 15 26 26 O 1.21287 * 110.09449 * 0.02562 * 25 17 16 27 27 H 1.08998 * 109.47282 * 300.00744 * 1 2 3 28 28 H 1.09000 * 109.46761 * 59.99916 * 1 2 3 29 29 H 1.08994 * 109.46797 * 179.97438 * 1 2 3 30 30 H 1.09007 * 109.47271 * 59.99873 * 3 2 1 31 31 H 1.08996 * 109.47285 * 299.99419 * 3 2 1 32 32 H 1.09007 * 109.46822 * 305.00017 * 4 3 2 33 33 H 1.08995 * 109.47454 * 184.99943 * 4 3 2 34 34 H 0.96996 * 119.99514 * 179.97438 * 9 8 6 35 35 H 1.09001 * 109.47998 * 150.00105 * 14 5 4 36 36 H 1.08996 * 109.47395 * 29.99276 * 14 5 4 37 37 H 1.08001 * 120.05160 * 0.02562 * 19 18 17 38 38 H 1.08003 * 119.94665 * 180.23353 * 20 19 18 39 39 H 1.08001 * 119.95164 * 180.02562 * 23 21 20 40 40 H 1.08005 * 120.05428 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1848 0.0006 5 7 3.9767 0.5641 -1.2508 6 6 4.0766 -0.7987 -1.3412 7 1 3.8585 -1.2953 -2.2751 8 6 4.4579 -1.5418 -0.2325 9 7 5.1472 -0.9743 0.7346 10 14 3.9928 -3.3470 -0.1130 11 1 3.2236 -3.7410 -1.3206 12 1 5.2250 -4.1705 -0.0199 13 1 3.1595 -3.5645 1.0967 14 6 4.3112 1.4012 -2.4056 15 6 3.0769 1.6187 -3.2427 16 7 2.2124 2.5942 -3.1148 17 6 1.2813 2.3818 -4.0721 18 6 0.0852 3.2189 -4.3388 19 6 -0.1665 4.3466 -3.5599 20 6 -1.2777 5.1241 -3.8145 21 6 -2.1472 4.7797 -4.8354 22 17 -3.5467 5.7586 -5.1469 23 6 -1.9040 3.6576 -5.6089 24 6 -0.7930 2.8764 -5.3651 25 7 1.6321 1.3008 -4.7189 26 8 2.6590 0.8523 -4.2548 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 1.6885 1.8465 0.8900 31 1 1.6887 1.8464 -0.8900 32 1 3.8508 0.5686 0.8428 33 1 3.9785 2.1766 0.0902 34 1 5.4134 -1.4935 1.5095 35 1 5.0741 0.9050 -3.0054 36 1 4.6896 2.3630 -2.0596 37 1 0.5090 4.6137 -2.7608 38 1 -1.4716 6.0005 -3.2138 39 1 -2.5849 3.3931 -6.4044 40 1 -0.6043 2.0009 -5.9688 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459544822.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:40:02 Heat of formation + Delta-G solvation = 70.062367 kcal Electronic energy + Delta-G solvation = -26823.200689 eV Core-core repulsion = 22861.516584 eV Total energy + Delta-G solvation = -3961.684105 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -44.99212 -39.49903 -37.34221 -36.82592 -35.77240 -35.17202 -32.83346 -31.47013 -31.24684 -30.39542 -29.10018 -26.54811 -25.71535 -24.53324 -23.72103 -23.02796 -22.25409 -21.12845 -20.31561 -17.80633 -17.60686 -16.88087 -16.78566 -15.84711 -15.74819 -15.46954 -15.06418 -14.78208 -14.36982 -14.17134 -13.89440 -13.86411 -13.78720 -13.55611 -13.35356 -12.53412 -12.25263 -12.00119 -11.95298 -11.81370 -11.65300 -11.27379 -11.13287 -11.12786 -10.93783 -10.89412 -10.76698 -10.61202 -10.32472 -10.07836 -9.85233 -9.73177 -9.35838 -8.81022 -8.66525 -8.57637 -6.90571 -5.90392 -3.45836 0.49448 1.01332 1.77237 1.80293 2.63913 3.35962 3.45259 3.47340 3.51687 3.53971 3.73945 4.26809 4.45687 4.58470 4.63131 4.66202 5.00902 5.10723 5.24168 5.30504 5.34885 5.43112 5.67513 5.73203 5.78733 5.84671 5.90925 5.96767 6.05688 6.11703 6.15545 6.20872 6.30330 6.34101 6.40760 6.50977 6.54606 6.58437 7.55427 7.74983 8.01014 8.36645 8.60217 9.00461 9.64724 10.11419 11.12256 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.019175 B = 0.002931 C = 0.002830 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1459.851768 B = 9551.248541 C = 9890.730770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.356 6.356 3 C 0.040 3.960 4 C 0.136 3.864 5 N -0.551 5.551 6 C -0.262 4.262 7 H 0.066 0.934 8 C 0.030 3.970 9 N -0.884 5.884 10 Si 0.904 3.096 11 H -0.276 1.276 12 H -0.292 1.292 13 H -0.287 1.287 14 C 0.215 3.785 15 C 0.204 3.796 16 N -0.494 5.494 17 C 0.189 3.811 18 C 0.001 3.999 19 C -0.066 4.066 20 C -0.113 4.113 21 C -0.026 4.026 22 Cl -0.071 7.071 23 C -0.112 4.112 24 C -0.077 4.077 25 N -0.388 5.388 26 O 0.080 5.920 27 H 0.027 0.973 28 H 0.024 0.976 29 H 0.074 0.926 30 H 0.025 0.975 31 H 0.040 0.960 32 H 0.114 0.886 33 H 0.047 0.953 34 H 0.256 0.744 35 H 0.093 0.907 36 H 0.090 0.910 37 H 0.146 0.854 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.847 11.679 -7.911 17.794 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.273 6.273 3 C -0.039 4.039 4 C 0.010 3.990 5 N -0.268 5.268 6 C -0.390 4.390 7 H 0.083 0.917 8 C -0.171 4.171 9 N -0.526 5.526 10 Si 0.733 3.267 11 H -0.201 1.201 12 H -0.219 1.219 13 H -0.213 1.213 14 C 0.082 3.918 15 C -0.019 4.019 16 N -0.228 5.228 17 C -0.081 4.081 18 C -0.001 4.001 19 C -0.086 4.086 20 C -0.131 4.131 21 C -0.053 4.053 22 Cl -0.042 7.042 23 C -0.131 4.131 24 C -0.097 4.097 25 N -0.097 5.097 26 O 0.022 5.978 27 H 0.046 0.954 28 H 0.043 0.957 29 H 0.093 0.907 30 H 0.043 0.957 31 H 0.058 0.942 32 H 0.132 0.868 33 H 0.066 0.934 34 H 0.066 0.934 35 H 0.111 0.889 36 H 0.108 0.892 37 H 0.164 0.836 38 H 0.157 0.843 39 H 0.156 0.844 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -11.344 11.509 -8.225 18.133 hybrid contribution -0.865 -0.654 0.204 1.104 sum -12.209 10.855 -8.021 18.200 Atomic orbital electron populations 1.22595 0.84261 1.01377 0.98294 1.88194 1.16512 1.27743 1.94880 1.23409 0.98421 0.84243 0.97800 1.21301 0.87979 0.97090 0.92630 1.43854 1.73300 1.03027 1.06625 1.18976 1.41185 0.80481 0.98374 0.91656 1.24928 0.96146 0.98176 0.97870 1.69952 1.35667 1.36502 1.10467 0.86236 0.77802 0.84587 0.78052 1.20055 1.21886 1.21308 1.19738 0.85375 0.97936 0.88701 1.31887 0.99704 0.83341 0.86989 1.71936 1.03937 1.25218 1.21704 1.23725 0.97548 0.93821 0.92960 1.17482 0.91187 0.94295 0.97090 1.21220 0.96397 0.92543 0.98476 1.21006 0.93984 1.00866 0.97277 1.21077 0.90879 0.94675 0.98695 1.98374 1.40563 1.70021 1.95238 1.20942 0.98171 0.93860 1.00135 1.21169 0.92742 0.99426 0.96356 1.74770 1.00875 1.12450 1.21637 1.85286 1.28478 1.45613 1.38450 0.95397 0.95745 0.90742 0.95703 0.94182 0.86823 0.93432 0.93376 0.88861 0.89181 0.83639 0.84262 0.84353 0.84243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.58 11.01 101.05 1.11 1.69 16 2 O -0.36 -8.01 10.13 -35.23 -0.36 -8.37 16 3 C 0.04 0.82 6.28 37.16 0.23 1.06 16 4 C 0.14 2.97 5.78 -4.04 -0.02 2.95 16 5 N -0.55 -12.43 2.42 -174.61 -0.42 -12.85 16 6 C -0.26 -6.68 8.93 -15.06 -0.13 -6.82 16 7 H 0.07 1.71 7.93 -52.49 -0.42 1.29 16 8 C 0.03 0.78 4.96 -17.43 -0.09 0.69 16 9 N -0.88 -23.88 11.31 55.49 0.63 -23.25 16 10 Si 0.90 21.56 29.61 -169.99 -5.03 16.52 16 11 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 12 H -0.29 -6.90 7.11 56.52 0.40 -6.50 16 13 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 14 C 0.22 3.95 6.33 -5.19 -0.03 3.92 16 15 C 0.20 3.79 7.69 -12.99 -0.10 3.69 16 16 N -0.49 -8.88 9.95 -9.88 -0.10 -8.97 16 17 C 0.19 3.28 7.80 -156.11 -1.22 2.06 16 18 C 0.00 0.02 5.88 -104.89 -0.62 -0.60 16 19 C -0.07 -0.82 9.70 -39.26 -0.38 -1.20 16 20 C -0.11 -1.17 9.81 -39.59 -0.39 -1.55 16 21 C -0.03 -0.27 6.32 -39.43 -0.25 -0.52 16 22 Cl -0.07 -0.65 28.95 -51.86 -1.50 -2.16 16 23 C -0.11 -1.16 9.81 -39.60 -0.39 -1.55 16 24 C -0.08 -0.94 9.69 -39.26 -0.38 -1.32 16 25 N -0.39 -7.19 11.86 30.97 0.37 -6.83 16 26 O 0.08 1.55 11.29 18.06 0.20 1.75 16 27 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.02 0.43 8.14 -51.93 -0.42 0.00 16 29 H 0.07 1.24 8.14 -51.93 -0.42 0.81 16 30 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 31 H 0.04 0.82 6.34 -51.93 -0.33 0.49 16 32 H 0.11 2.87 5.31 -51.93 -0.28 2.60 16 33 H 0.05 0.93 7.88 -51.93 -0.41 0.52 16 34 H 0.26 6.73 8.31 -40.82 -0.34 6.39 16 35 H 0.09 1.61 8.04 -51.93 -0.42 1.19 16 36 H 0.09 1.46 7.88 -51.93 -0.41 1.05 16 37 H 0.15 1.76 7.88 -52.49 -0.41 1.35 16 38 H 0.14 1.14 8.06 -52.48 -0.42 0.71 16 39 H 0.14 1.12 8.06 -52.49 -0.42 0.70 16 40 H 0.14 1.67 7.87 -52.48 -0.41 1.26 16 LS Contribution 362.97 15.07 5.47 5.47 Total: -1.00 -28.87 362.97 -8.15 -37.02 By element: Atomic # 1 Polarization: 3.92 SS G_CDS: -4.76 Total: -0.84 kcal Atomic # 6 Polarization: 5.16 SS G_CDS: -2.65 Total: 2.50 kcal Atomic # 7 Polarization: -52.38 SS G_CDS: 0.47 Total: -51.91 kcal Atomic # 8 Polarization: -6.47 SS G_CDS: -0.15 Total: -6.62 kcal Atomic # 14 Polarization: 21.56 SS G_CDS: -5.03 Total: 16.52 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -1.50 Total: -2.16 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -28.87 -8.15 -37.02 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459544822.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.082 kcal (2) G-P(sol) polarization free energy of solvation -28.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds