Wall clock time and date at job start Tue Mar 31 2020 19:38:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38512 * 120.86050 * 2 1 4 4 Cl 1.73602 * 120.36309 * 359.97438 * 3 2 1 5 5 C 1.38432 * 119.27722 * 179.75229 * 3 2 1 6 6 N 1.31949 * 121.06070 * 0.53051 * 5 3 2 7 7 C 1.31669 * 121.89392 * 359.72287 * 6 5 3 8 8 C 1.39561 * 120.59305 * 0.02562 * 7 6 5 9 9 C 1.47840 * 120.55179 * 180.02562 * 8 7 6 10 10 O 1.21554 * 120.00317 * 230.05002 * 9 8 7 11 11 N 1.34778 * 120.00237 * 50.04137 * 9 8 7 12 12 C 1.46963 * 120.59040 * 5.59775 * 11 9 8 13 13 C 1.53818 * 108.39789 * 124.75360 * 12 11 9 14 14 N 1.46968 * 108.57747 * 49.63853 * 13 12 11 15 15 C 1.34777 * 120.59741 * 124.62593 * 14 13 12 16 16 O 1.21684 * 120.00097 * 174.83498 * 15 14 13 17 17 C 1.46376 * 119.99421 * 354.83436 * 15 14 13 18 18 H 1.07994 * 120.00181 * 6.30966 * 17 15 14 19 19 C 1.40055 * 119.99608 * 186.30351 * 17 15 14 20 20 N 1.30668 * 119.99736 * 0.02562 * 19 17 15 21 21 Si 1.86795 * 119.99962 * 180.02562 * 19 17 15 22 22 H 1.48499 * 109.46968 * 60.00380 * 21 19 17 23 23 H 1.48502 * 109.47115 * 180.02562 * 21 19 17 24 24 H 1.48502 * 109.47114 * 300.00214 * 21 19 17 25 25 C 1.46966 * 118.80809 * 304.64133 * 14 13 12 26 26 C 1.46969 * 120.59658 * 185.87095 * 11 9 8 27 27 H 1.08996 * 109.46919 * 264.51675 * 1 2 3 28 28 H 1.09002 * 109.47065 * 144.51658 * 1 2 3 29 29 H 1.09003 * 109.46764 * 24.51695 * 1 2 3 30 30 H 1.08000 * 119.46629 * 180.25325 * 5 3 2 31 31 H 1.07997 * 119.70202 * 179.97438 * 7 6 5 32 32 H 1.09002 * 109.60580 * 244.53295 * 12 11 9 33 33 H 1.08994 * 109.61271 * 5.04530 * 12 11 9 34 34 H 1.08993 * 109.74242 * 289.84995 * 13 12 11 35 35 H 1.09000 * 109.52816 * 169.29976 * 13 12 11 36 36 H 0.97004 * 120.00159 * 179.97438 * 20 19 17 37 37 H 1.08994 * 109.61444 * 295.48537 * 25 14 13 38 38 H 1.09005 * 109.74654 * 175.05654 * 25 14 13 39 39 H 1.09003 * 109.60314 * 354.95377 * 26 11 9 40 40 H 1.08993 * 109.60648 * 115.46472 * 26 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2175 1.1890 0.0000 4 17 1.3818 2.7106 -0.0007 5 6 3.6013 1.1508 0.0052 6 7 4.2506 0.0021 -0.0003 7 6 3.6198 -1.1536 -0.0055 8 6 2.2250 -1.2015 -0.0059 9 6 1.5176 -2.4997 -0.0112 10 8 0.6334 -2.7068 -0.8192 11 7 1.8533 -3.4537 0.8797 12 6 2.8331 -3.1761 1.9392 13 6 2.1847 -3.4976 3.2965 14 7 1.5819 -4.8359 3.2221 15 6 1.9181 -5.7902 4.1125 16 8 1.3447 -6.8634 4.0998 17 6 2.9730 -5.5355 5.0948 18 1 3.4111 -4.5515 5.1739 19 6 3.4141 -6.5678 5.9322 20 7 2.8842 -7.7584 5.8362 21 14 4.7598 -6.2427 7.1862 22 1 4.3144 -5.1834 8.1268 23 1 5.0437 -7.4890 7.9421 24 1 5.9915 -5.7973 6.4864 25 6 0.6062 -5.1151 2.1591 26 6 1.2504 -4.7920 0.8053 27 1 -0.3633 -0.0982 1.0229 28 1 -0.3633 -0.8368 -0.5965 29 1 -0.3633 0.9351 -0.4265 30 1 4.1583 2.0760 0.0094 31 1 4.1868 -2.0727 -0.0104 32 1 3.7147 -3.8006 1.7949 33 1 3.1177 -2.1244 1.9080 34 1 1.4131 -2.7608 3.5196 35 1 2.9457 -3.4820 4.0767 36 1 3.1900 -8.4735 6.4159 37 1 -0.2777 -4.4934 2.3013 38 1 0.3219 -6.1671 2.1871 39 1 0.4895 -4.8075 0.0250 40 1 2.0219 -5.5288 0.5822 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000565184390.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:38:40 Heat of formation + Delta-G solvation = -24.913349 kcal Electronic energy + Delta-G solvation = -26936.528344 eV Core-core repulsion = 22970.725783 eV Total energy + Delta-G solvation = -3965.802561 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.21950 -39.55007 -38.01392 -37.05972 -36.01729 -34.16419 -33.31093 -32.56897 -31.96298 -30.71745 -28.44690 -27.46145 -26.21570 -24.65960 -23.53222 -22.62348 -22.10329 -20.25362 -18.87561 -17.86954 -17.33301 -16.78769 -16.45094 -16.08433 -15.73202 -15.36388 -15.03495 -14.74247 -14.58289 -14.29005 -14.14889 -13.96367 -13.40622 -13.29311 -13.20296 -12.80898 -12.71878 -12.40573 -12.22532 -12.01943 -11.75162 -11.53550 -11.49571 -11.26577 -11.09373 -11.03407 -10.84637 -10.42745 -10.33683 -10.16679 -9.82600 -9.67946 -9.30718 -8.98237 -8.81334 -7.72746 -7.36230 -6.31122 -4.77381 0.29618 0.61800 1.58151 2.48931 2.84802 3.08277 3.14281 3.15367 3.25413 3.93072 3.98764 4.16463 4.17994 4.25743 4.37555 4.44133 4.75466 4.84772 5.08956 5.15247 5.20858 5.32026 5.35020 5.42494 5.47396 5.52009 5.67736 5.78559 5.82860 5.87261 5.94394 6.04647 6.18420 6.25313 6.42006 6.56915 7.30156 7.33777 7.36494 7.40716 7.96637 7.99424 8.18735 8.90422 9.26377 10.44306 10.62823 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.016350 B = 0.003057 C = 0.002780 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1712.143870 B = 9157.677839 C =10068.425249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.018 3.982 3 C -0.100 4.100 4 Cl -0.047 7.047 5 C 0.133 3.867 6 N -0.472 5.472 7 C 0.141 3.859 8 C -0.167 4.167 9 C 0.565 3.435 10 O -0.535 6.535 11 N -0.593 5.593 12 C 0.084 3.916 13 C 0.110 3.890 14 N -0.643 5.643 15 C 0.559 3.441 16 O -0.574 6.574 17 C -0.546 4.546 18 H 0.073 0.927 19 C 0.088 3.912 20 N -0.766 5.766 21 Si 0.907 3.093 22 H -0.267 1.267 23 H -0.280 1.280 24 H -0.267 1.267 25 C 0.108 3.892 26 C 0.099 3.901 27 H 0.085 0.915 28 H 0.101 0.899 29 H 0.080 0.920 30 H 0.169 0.831 31 H 0.170 0.830 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.047 0.953 35 H 0.108 0.892 36 H 0.270 0.730 37 H 0.047 0.953 38 H 0.098 0.902 39 H 0.095 0.905 40 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.973 17.885 -10.481 20.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.010 3.990 3 C -0.129 4.129 4 Cl -0.018 7.018 5 C -0.024 4.024 6 N -0.181 5.181 7 C -0.016 4.016 8 C -0.172 4.172 9 C 0.352 3.648 10 O -0.413 6.413 11 N -0.325 5.325 12 C -0.040 4.040 13 C -0.015 4.015 14 N -0.381 5.381 15 C 0.366 3.634 16 O -0.456 6.456 17 C -0.582 4.582 18 H 0.091 0.909 19 C -0.132 4.132 20 N -0.394 5.394 21 Si 0.731 3.269 22 H -0.192 1.192 23 H -0.205 1.205 24 H -0.192 1.192 25 C -0.017 4.017 26 C -0.024 4.024 27 H 0.103 0.897 28 H 0.120 0.880 29 H 0.099 0.901 30 H 0.187 0.813 31 H 0.187 0.813 32 H 0.100 0.900 33 H 0.101 0.899 34 H 0.065 0.935 35 H 0.126 0.874 36 H 0.081 0.919 37 H 0.065 0.935 38 H 0.116 0.884 39 H 0.113 0.887 40 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.004 17.063 -10.817 20.228 hybrid contribution -0.127 0.466 0.660 0.818 sum 0.878 17.529 -10.156 20.278 Atomic orbital electron populations 1.21171 0.88621 1.05453 1.04291 1.20228 0.97888 0.89816 0.91111 1.21887 0.94002 0.87923 1.09120 1.98379 1.78123 1.28441 1.96863 1.22972 0.89310 0.97393 0.92753 1.67898 1.39329 0.97714 1.13116 1.23173 0.90224 0.96910 0.91340 1.20853 0.95263 0.94137 1.06994 1.17932 0.82646 0.82997 0.81222 1.90747 1.30887 1.80147 1.39486 1.48059 1.42835 1.12456 1.29151 1.22609 0.91908 1.01272 0.88227 1.21864 0.98141 0.85860 0.95642 1.48210 1.45490 1.12208 1.32232 1.18282 0.83164 0.81904 0.80075 1.90604 1.56220 1.25150 1.73660 1.20898 1.20644 0.97540 1.19128 0.90924 1.25721 0.96296 0.94446 0.96736 1.69986 1.35484 1.01319 1.32652 0.86442 0.81304 0.78478 0.80644 1.19195 1.20497 1.19163 1.21495 0.91508 1.02723 0.85960 1.22194 0.98803 0.81701 0.99654 0.89663 0.88024 0.90143 0.81349 0.81267 0.90023 0.89946 0.93506 0.87390 0.91868 0.93484 0.88409 0.88654 0.90751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.44 9.32 36.01 0.34 -1.10 16 2 C 0.02 0.20 5.95 -103.87 -0.62 -0.41 16 3 C -0.10 -0.97 6.33 -39.41 -0.25 -1.22 16 4 Cl -0.05 -0.39 27.37 -51.86 -1.42 -1.81 16 5 C 0.13 1.23 10.97 -17.43 -0.19 1.03 16 6 N -0.47 -5.05 10.34 -12.88 -0.13 -5.19 16 7 C 0.14 1.52 8.76 -17.13 -0.15 1.37 16 8 C -0.17 -1.99 4.78 -104.83 -0.50 -2.49 16 9 C 0.57 7.93 6.76 -12.33 -0.08 7.85 16 10 O -0.53 -8.78 14.43 5.32 0.08 -8.70 16 11 N -0.59 -8.41 2.94 -173.33 -0.51 -8.92 16 12 C 0.08 1.11 5.59 -3.36 -0.02 1.10 16 13 C 0.11 1.83 6.52 -3.36 -0.02 1.81 16 14 N -0.64 -13.46 2.95 -173.87 -0.51 -13.98 16 15 C 0.56 14.93 7.61 -12.99 -0.10 14.83 16 16 O -0.57 -17.69 14.48 5.20 0.08 -17.62 16 17 C -0.55 -14.27 8.87 -35.63 -0.32 -14.59 16 18 H 0.07 1.69 5.64 -52.49 -0.30 1.40 16 19 C 0.09 2.33 5.50 -17.37 -0.10 2.24 16 20 N -0.77 -21.98 11.85 55.55 0.66 -21.32 16 21 Si 0.91 19.01 29.56 -169.99 -5.02 13.99 16 22 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 23 H -0.28 -5.81 7.11 56.52 0.40 -5.41 16 24 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 25 C 0.11 1.99 6.58 -3.60 -0.02 1.96 16 26 C 0.10 1.53 6.60 -3.60 -0.02 1.51 16 27 H 0.08 0.84 8.14 -51.93 -0.42 0.41 16 28 H 0.10 1.23 5.90 -51.93 -0.31 0.93 16 29 H 0.08 0.72 6.81 -51.93 -0.35 0.36 16 30 H 0.17 1.09 8.06 -52.49 -0.42 0.67 16 31 H 0.17 1.58 7.47 -52.49 -0.39 1.19 16 32 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 33 H 0.08 0.92 5.12 -51.93 -0.27 0.66 16 34 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 35 H 0.11 1.84 5.29 -51.93 -0.27 1.57 16 36 H 0.27 7.08 8.29 -40.82 -0.34 6.74 16 37 H 0.05 0.83 8.14 -51.93 -0.42 0.40 16 38 H 0.10 1.99 7.03 -51.93 -0.36 1.63 16 39 H 0.10 1.41 6.99 -51.93 -0.36 1.05 16 40 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 LS Contribution 342.69 15.07 5.16 5.16 Total: -1.00 -33.30 342.69 -7.97 -41.27 By element: Atomic # 1 Polarization: 7.53 SS G_CDS: -4.29 Total: 3.24 kcal Atomic # 6 Polarization: 15.93 SS G_CDS: -2.06 Total: 13.87 kcal Atomic # 7 Polarization: -48.91 SS G_CDS: -0.50 Total: -49.41 kcal Atomic # 8 Polarization: -26.47 SS G_CDS: 0.15 Total: -26.32 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.02 Total: 13.99 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -1.42 Total: -1.81 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -33.30 -7.97 -41.27 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000565184390.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.357 kcal (2) G-P(sol) polarization free energy of solvation -33.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds