Wall clock time and date at job start Tue Mar 31 2020 20:40:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42896 * 113.99948 * 2 1 4 4 C 1.53004 * 109.47065 * 179.97438 * 3 2 1 5 5 N 1.46497 * 109.47239 * 64.99913 * 4 3 2 6 6 C 1.46506 * 119.99671 * 270.00400 * 5 4 3 7 7 C 1.50702 * 109.46485 * 274.78447 * 6 5 4 8 8 H 1.07995 * 120.00610 * 355.08503 * 7 6 5 9 9 C 1.37880 * 119.99732 * 175.08854 * 7 6 5 10 10 N 1.31508 * 120.00150 * 185.05382 * 9 7 6 11 11 Si 1.86809 * 119.99927 * 5.04766 * 9 7 6 12 12 H 1.48498 * 109.46645 * 94.92062 * 11 9 7 13 13 H 1.48500 * 109.47024 * 214.91960 * 11 9 7 14 14 H 1.48498 * 109.47109 * 334.92351 * 11 9 7 15 15 C 1.34774 * 120.00492 * 89.99546 * 5 4 3 16 16 O 1.21798 * 119.99557 * 5.20883 * 15 5 4 17 17 C 1.41657 * 120.00340 * 185.20315 * 15 5 4 18 18 C 1.38719 * 126.80382 * 260.26069 * 17 15 5 19 19 Cl 1.73603 * 125.91539 * 0.02562 * 18 17 15 20 20 N 1.32412 * 108.16841 * 180.02562 * 18 17 15 21 21 C 1.33207 * 109.83748 * 0.02562 * 20 18 17 22 22 C 1.40651 * 131.78179 * 179.97438 * 21 20 18 23 23 C 1.36291 * 119.39191 * 180.02562 * 22 21 20 24 24 C 1.40177 * 119.60203 * 0.02562 * 23 22 21 25 25 C 1.35259 * 120.12675 * 359.97438 * 24 23 22 26 26 N 1.35951 * 120.63605 * 0.02562 * 25 24 23 27 27 H 1.09003 * 109.46669 * 300.00281 * 1 2 3 28 28 H 1.08998 * 109.46525 * 60.00288 * 1 2 3 29 29 H 1.08997 * 109.46824 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47382 * 59.99596 * 3 2 1 31 31 H 1.09000 * 109.46938 * 299.99952 * 3 2 1 32 32 H 1.09001 * 109.46894 * 304.99607 * 4 3 2 33 33 H 1.09001 * 109.47042 * 184.99659 * 4 3 2 34 34 H 1.09000 * 109.47456 * 34.78520 * 6 5 4 35 35 H 1.09002 * 109.46651 * 154.78952 * 6 5 4 36 36 H 0.96999 * 120.00488 * 179.97438 * 10 9 7 37 37 H 1.07997 * 120.30744 * 359.97438 * 22 21 20 38 38 H 1.07994 * 120.20075 * 180.27293 * 23 22 21 39 39 H 1.08000 * 119.93450 * 180.02562 * 24 23 22 40 40 H 1.07998 * 119.68353 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 0.0006 5 7 3.9768 0.5639 -1.2508 6 6 4.1063 -0.8927 -1.3401 7 6 5.4619 -1.3085 -0.8297 8 1 6.1866 -0.5587 -0.5489 9 6 5.7769 -2.6465 -0.7212 10 7 6.9202 -3.0113 -0.1835 11 14 4.5795 -3.9410 -1.3380 12 1 4.9423 -4.3301 -2.7244 13 1 4.6431 -5.1341 -0.4562 14 1 3.2016 -3.3876 -1.3236 15 6 4.2634 1.3327 -2.3200 16 8 4.2476 2.5464 -2.2191 17 6 4.5831 0.7293 -3.5611 18 6 5.8513 0.5361 -4.0890 19 17 7.3477 0.9952 -3.3381 20 7 5.7229 -0.0592 -5.2648 21 6 4.4334 -0.2630 -5.5297 22 6 3.7843 -0.8494 -6.6312 23 6 2.4238 -0.9292 -6.6410 24 6 1.6928 -0.4263 -5.5559 25 6 2.3353 0.1341 -4.5058 26 7 3.6921 0.2175 -4.4881 27 1 -0.3633 0.5139 0.8900 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.6886 1.8464 0.8899 31 1 1.6886 1.8463 -0.8900 32 1 3.8508 0.5685 0.8428 33 1 3.9785 2.1765 0.0902 34 1 3.3305 -1.3641 -0.7369 35 1 3.9981 -1.2039 -2.3792 36 1 7.1418 -3.9526 -0.1068 37 1 4.3587 -1.2321 -7.4618 38 1 1.9122 -1.3807 -7.4781 39 1 0.6145 -0.4871 -5.5579 40 1 1.7650 0.5196 -3.6736 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000748318763.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:40:26 Heat of formation + Delta-G solvation = 22.222910 kcal Electronic energy + Delta-G solvation = -28040.953001 eV Core-core repulsion = 24077.194422 eV Total energy + Delta-G solvation = -3963.758579 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.79786 -39.35964 -37.69952 -37.32349 -36.07329 -35.13743 -33.70678 -32.54120 -30.63249 -30.13937 -28.87489 -27.60652 -26.17115 -24.33757 -23.48732 -22.64005 -22.42796 -21.65190 -19.43511 -17.50944 -17.11485 -16.90700 -16.74852 -16.34030 -16.12478 -15.87913 -15.44297 -15.27655 -14.89435 -14.71189 -14.21508 -14.15314 -13.79421 -13.19184 -12.63223 -12.56155 -12.51213 -12.25218 -12.00125 -11.94308 -11.78773 -11.73033 -11.06946 -11.04633 -10.94688 -10.88818 -10.85529 -10.63193 -10.24009 -10.11148 -9.69070 -9.58237 -9.45428 -8.62531 -8.58262 -7.92310 -7.72127 -6.13403 -4.12768 0.68352 1.07611 1.92974 2.43708 2.69540 3.11127 3.22796 3.29883 3.31190 3.49282 3.75557 3.93475 4.23538 4.34325 4.54644 4.70165 4.86008 5.00318 5.17659 5.18338 5.21059 5.29119 5.39193 5.42833 5.46513 5.52483 5.64367 5.70533 5.89652 5.93345 6.02563 6.22916 6.25206 6.38065 6.44170 6.76012 6.95595 7.18879 7.26432 7.51931 7.72575 7.95402 8.41602 8.58052 8.94214 9.46653 10.99306 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.007835 B = 0.006720 C = 0.005723 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3572.894851 B = 4165.654813 C = 4891.089019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.379 6.379 3 C 0.048 3.952 4 C 0.118 3.882 5 N -0.566 5.566 6 C 0.214 3.786 7 C -0.534 4.534 8 H 0.082 0.918 9 C 0.082 3.918 10 N -0.887 5.887 11 Si 0.861 3.139 12 H -0.276 1.276 13 H -0.282 1.282 14 H -0.262 1.262 15 C 0.595 3.405 16 O -0.548 6.548 17 C -0.077 4.077 18 C 0.179 3.821 19 Cl 0.026 6.974 20 N -0.482 5.482 21 C 0.242 3.758 22 C -0.078 4.078 23 C -0.098 4.098 24 C -0.142 4.142 25 C 0.069 3.931 26 N -0.331 5.331 27 H 0.038 0.962 28 H 0.035 0.965 29 H 0.083 0.917 30 H 0.057 0.943 31 H 0.046 0.954 32 H 0.097 0.903 33 H 0.096 0.904 34 H 0.050 0.950 35 H 0.017 0.983 36 H 0.265 0.735 37 H 0.155 0.845 38 H 0.145 0.855 39 H 0.153 0.847 40 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.167 5.220 -8.006 17.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.297 6.297 3 C -0.030 4.030 4 C -0.005 4.005 5 N -0.295 5.295 6 C 0.093 3.907 7 C -0.573 4.573 8 H 0.100 0.900 9 C -0.122 4.122 10 N -0.525 5.525 11 Si 0.688 3.312 12 H -0.202 1.202 13 H -0.208 1.208 14 H -0.187 1.187 15 C 0.381 3.619 16 O -0.427 6.427 17 C -0.194 4.194 18 C 0.015 3.985 19 Cl 0.054 6.946 20 N -0.204 5.204 21 C 0.001 3.999 22 C -0.098 4.098 23 C -0.122 4.122 24 C -0.163 4.163 25 C -0.055 4.055 26 N -0.004 5.004 27 H 0.056 0.944 28 H 0.053 0.947 29 H 0.101 0.899 30 H 0.075 0.925 31 H 0.064 0.936 32 H 0.116 0.884 33 H 0.114 0.886 34 H 0.068 0.932 35 H 0.035 0.965 36 H 0.075 0.925 37 H 0.173 0.827 38 H 0.163 0.837 39 H 0.171 0.829 40 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -13.166 5.360 -8.228 16.425 hybrid contribution -1.149 -0.580 0.348 1.333 sum -14.316 4.780 -7.880 17.026 Atomic orbital electron populations 1.22704 0.82016 1.02429 0.99400 1.88049 1.18797 1.27632 1.95255 1.23057 0.95065 0.84832 1.00055 1.21474 0.90897 1.00365 0.87785 1.47980 1.62039 1.09305 1.10146 1.19896 0.98980 0.74781 0.97005 1.21283 0.98130 0.93349 1.44497 0.90008 1.24765 0.95013 0.98077 0.94306 1.69881 1.22572 1.16803 1.43209 0.87078 0.82465 0.82272 0.79432 1.20178 1.20765 1.18651 1.15470 0.77817 0.86005 0.82638 1.90795 1.53176 1.13338 1.85410 1.19439 0.88690 1.15483 0.95746 1.21045 0.87213 0.98839 0.91425 1.98407 1.28004 1.89583 1.78573 1.70084 1.14256 1.20400 1.15630 1.20686 0.86169 1.01931 0.91123 1.20293 0.94207 0.99411 0.95876 1.21039 0.93137 0.99150 0.98852 1.20806 1.01164 1.01008 0.93318 1.21629 0.80893 1.01668 1.01288 1.42450 1.06110 1.36496 1.15300 0.94363 0.94667 0.89892 0.92480 0.93600 0.88426 0.88607 0.93225 0.96549 0.92507 0.82731 0.83696 0.82917 0.82193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.35 11.01 101.05 1.11 1.46 16 2 O -0.38 -5.92 9.46 -35.23 -0.33 -6.25 16 3 C 0.05 0.69 6.28 37.16 0.23 0.92 16 4 C 0.12 2.07 5.87 -4.04 -0.02 2.05 16 5 N -0.57 -11.76 2.42 -178.45 -0.43 -12.19 16 6 C 0.21 4.99 3.98 -5.19 -0.02 4.97 16 7 C -0.53 -14.57 9.93 -34.44 -0.34 -14.91 16 8 H 0.08 2.46 8.06 -52.49 -0.42 2.03 16 9 C 0.08 2.31 5.47 -17.82 -0.10 2.21 16 10 N -0.89 -26.54 13.96 55.43 0.77 -25.76 16 11 Si 0.86 21.01 27.59 -169.99 -4.69 16.32 16 12 H -0.28 -6.81 7.11 56.52 0.40 -6.40 16 13 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 14 H -0.26 -6.06 6.39 56.52 0.36 -5.70 16 15 C 0.60 12.66 7.02 -14.96 -0.11 12.56 16 16 O -0.55 -12.23 16.64 5.10 0.08 -12.15 16 17 C -0.08 -1.63 4.63 -83.42 -0.39 -2.01 16 18 C 0.18 3.89 7.77 -17.12 -0.13 3.76 16 19 Cl 0.03 0.54 29.11 -51.86 -1.51 -0.97 16 20 N -0.48 -9.93 11.25 -9.39 -0.11 -10.03 16 21 C 0.24 4.28 7.77 -156.06 -1.21 3.07 16 22 C -0.08 -0.99 10.10 -39.37 -0.40 -1.38 16 23 C -0.10 -0.95 10.07 -39.55 -0.40 -1.34 16 24 C -0.14 -1.43 10.00 -39.92 -0.40 -1.83 16 25 C 0.07 0.95 10.82 -16.79 -0.18 0.77 16 26 N -0.33 -5.94 2.70 -60.11 -0.16 -6.10 16 27 H 0.04 0.36 8.14 -51.93 -0.42 -0.06 16 28 H 0.03 0.34 8.14 -51.93 -0.42 -0.08 16 29 H 0.08 0.85 8.14 -51.93 -0.42 0.42 16 30 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 31 H 0.05 0.66 8.14 -51.93 -0.42 0.23 16 32 H 0.10 1.76 8.07 -51.93 -0.42 1.34 16 33 H 0.10 1.61 7.35 -51.93 -0.38 1.23 16 34 H 0.05 1.17 5.97 -51.93 -0.31 0.86 16 35 H 0.02 0.40 5.98 -51.93 -0.31 0.09 16 36 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 37 H 0.16 1.57 8.06 -52.49 -0.42 1.15 16 38 H 0.15 0.85 8.06 -52.49 -0.42 0.43 16 39 H 0.15 0.96 8.06 -52.49 -0.42 0.53 16 40 H 0.16 2.00 8.06 -52.49 -0.42 1.58 16 LS Contribution 361.14 15.07 5.44 5.44 Total: -1.00 -34.68 361.14 -8.11 -42.79 By element: Atomic # 1 Polarization: 3.46 SS G_CDS: -4.83 Total: -1.37 kcal Atomic # 6 Polarization: 12.63 SS G_CDS: -2.35 Total: 10.28 kcal Atomic # 7 Polarization: -54.17 SS G_CDS: 0.07 Total: -54.09 kcal Atomic # 8 Polarization: -18.15 SS G_CDS: -0.25 Total: -18.40 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -4.69 Total: 16.32 kcal Atomic # 17 Polarization: 0.54 SS G_CDS: -1.51 Total: -0.97 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -34.68 -8.11 -42.79 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000748318763.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.011 kcal (2) G-P(sol) polarization free energy of solvation -34.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.788 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.223 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds