Wall clock time and date at job start Tue Mar 31 2020 19:35:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.31840 * 119.66269 * 2 1 4 4 C 1.31946 * 121.78030 * 180.02562 * 3 2 1 5 5 Cl 1.73607 * 119.54780 * 180.02562 * 4 3 2 6 6 C 1.38434 * 120.90020 * 0.02576 * 4 3 2 7 7 C 1.38438 * 119.22825 * 359.69558 * 6 4 3 8 8 C 1.38854 * 119.66036 * 180.02562 * 2 1 3 9 9 N 1.39792 * 120.48408 * 359.95553 * 8 2 1 10 10 C 1.34774 * 119.99916 * 154.75629 * 9 8 2 11 11 O 1.21375 * 120.00149 * 4.37763 * 10 9 8 12 12 C 1.49352 * 119.99694 * 184.37472 * 10 9 8 13 13 O 1.21355 * 120.00126 * 5.11667 * 12 10 9 14 14 N 1.34775 * 120.00100 * 185.11745 * 12 10 9 15 15 C 1.46500 * 120.00317 * 185.05697 * 14 12 10 16 16 C 1.52999 * 109.47102 * 184.73739 * 15 14 12 17 17 C 1.50694 * 115.55365 * 304.21310 * 16 15 14 18 18 H 1.08004 * 120.00120 * 95.26758 * 17 16 15 19 19 C 1.37875 * 119.99909 * 274.99518 * 17 16 15 20 20 N 1.31509 * 120.00371 * 355.49737 * 19 17 16 21 21 Si 1.86805 * 119.99810 * 175.49752 * 19 17 16 22 22 H 1.48505 * 109.47010 * 90.00175 * 21 19 17 23 23 H 1.48503 * 109.47012 * 209.99737 * 21 19 17 24 24 H 1.48497 * 109.47366 * 329.99921 * 21 19 17 25 25 C 1.53003 * 117.49822 * 89.88436 * 16 15 14 26 26 C 1.52999 * 117.49649 * 158.54428 * 16 15 14 27 27 H 1.08999 * 109.47665 * 269.97785 * 1 2 3 28 28 H 1.09007 * 109.47219 * 29.97893 * 1 2 3 29 29 H 1.09005 * 109.47332 * 149.97514 * 1 2 3 30 30 H 1.08002 * 120.38415 * 179.97438 * 6 4 3 31 31 H 1.08004 * 120.81332 * 180.27652 * 7 6 4 32 32 H 0.96998 * 119.99527 * 334.76506 * 9 8 2 33 33 H 0.97005 * 119.99960 * 5.05927 * 14 12 10 34 34 H 1.09002 * 109.46873 * 64.73851 * 15 14 12 35 35 H 1.09000 * 109.47048 * 304.73473 * 15 14 12 36 36 H 0.96999 * 120.00514 * 184.99694 * 20 19 17 37 37 H 1.09000 * 117.49929 * 215.00138 * 25 16 15 38 38 H 1.08995 * 117.49753 * 0.02670 * 25 16 15 39 39 H 1.08996 * 117.50363 * 359.97436 * 26 16 15 40 40 H 1.08998 * 117.50103 * 144.97567 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1594 1.1456 0.0000 4 6 3.4780 1.1944 -0.0005 5 17 4.2778 2.7353 0.0002 6 6 4.2323 0.0336 -0.0016 7 6 3.5877 -1.1915 0.0043 8 6 2.1941 -1.2066 -0.0005 9 7 1.4982 -2.4190 -0.0001 10 6 2.0780 -3.5289 -0.4984 11 8 3.2316 -3.4945 -0.8742 12 6 1.3010 -4.8013 -0.5880 13 8 0.1223 -4.8140 -0.2998 14 7 1.9090 -5.9354 -0.9888 15 6 1.1249 -7.1575 -1.1833 16 6 2.0638 -8.3175 -1.5208 17 6 2.9631 -8.1008 -2.7104 18 1 3.9699 -7.7370 -2.5672 19 6 2.5025 -8.3724 -3.9813 20 7 1.3113 -8.9035 -4.1495 21 14 3.5707 -7.9859 -5.4643 22 1 4.4148 -9.1644 -5.7869 23 1 2.7053 -7.6637 -6.6272 24 1 4.4412 -6.8225 -5.1577 25 6 2.6194 -9.1386 -0.3555 26 6 1.5501 -9.7371 -1.2728 27 1 -0.3634 -0.0004 1.0276 28 1 -0.3634 0.8902 -0.5135 29 1 -0.3634 -0.8898 -0.5142 30 1 5.3112 0.0832 -0.0024 31 1 4.1509 -2.1130 0.0081 32 1 0.5980 -2.4613 0.3586 33 1 2.8658 -5.9424 -1.1485 34 1 0.4202 -7.0106 -2.0018 35 1 0.5775 -7.3874 -0.2692 36 1 1.0161 -9.1615 -5.0368 37 1 3.6354 -9.5221 -0.4493 38 1 2.3157 -8.8527 0.6515 39 1 0.5435 -9.8448 -0.8689 40 1 1.8623 -10.5144 -1.9703 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000797539097.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:35:45 Heat of formation + Delta-G solvation = -11.599874 kcal Electronic energy + Delta-G solvation = -25872.104483 eV Core-core repulsion = 21906.879238 eV Total energy + Delta-G solvation = -3965.225245 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.48924 -40.06922 -38.49356 -36.97299 -36.85152 -35.58388 -33.58053 -33.37048 -32.06597 -31.16354 -28.11593 -27.15726 -25.61719 -24.70456 -23.07060 -22.34061 -21.23711 -20.27164 -19.72460 -18.73648 -17.63725 -17.25324 -16.70174 -16.26613 -16.15775 -15.79687 -15.16359 -14.88981 -14.74199 -14.31702 -14.18418 -13.97743 -13.70972 -13.32575 -13.26840 -12.82878 -12.74958 -12.57067 -12.11061 -11.95941 -11.73329 -11.58409 -11.48363 -11.07908 -11.05839 -11.01827 -10.59341 -10.32853 -10.17198 -9.95521 -9.68304 -9.35819 -9.17989 -8.69187 -8.52748 -8.50192 -8.24493 -6.17306 -4.28049 0.43549 0.83954 1.51648 1.53040 2.26392 3.16289 3.21207 3.29735 3.32817 3.38348 3.66165 3.97136 4.28509 4.30919 4.52526 4.57188 4.78619 5.06069 5.10381 5.19685 5.23550 5.24331 5.41979 5.62633 5.72571 5.78911 5.85565 6.16992 6.27451 6.30660 6.35572 6.55310 6.65384 6.70349 6.89925 7.00164 7.19856 7.35900 7.39776 7.49046 7.72422 7.88493 8.20685 8.31013 8.74583 9.40822 10.89504 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.015875 B = 0.002555 C = 0.002377 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1763.354095 B =10957.123705 C =11775.867561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C 0.124 3.876 3 N -0.459 5.459 4 C 0.156 3.844 5 Cl -0.035 7.035 6 C -0.136 4.136 7 C -0.077 4.077 8 C 0.105 3.895 9 N -0.640 5.640 10 C 0.510 3.490 11 O -0.493 6.493 12 C 0.498 3.502 13 O -0.536 6.536 14 N -0.657 5.657 15 C 0.158 3.842 16 C 0.020 3.980 17 C -0.505 4.505 18 H 0.062 0.938 19 C 0.076 3.924 20 N -0.874 5.874 21 Si 0.889 3.111 22 H -0.280 1.280 23 H -0.286 1.286 24 H -0.271 1.271 25 C -0.210 4.210 26 C -0.139 4.139 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.080 0.920 30 H 0.150 0.850 31 H 0.176 0.824 32 H 0.427 0.573 33 H 0.417 0.583 34 H 0.075 0.925 35 H 0.050 0.950 36 H 0.263 0.737 37 H 0.079 0.921 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.346 15.996 9.764 18.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.018 4.018 3 N -0.170 5.170 4 C -0.009 4.009 5 Cl -0.006 7.006 6 C -0.157 4.157 7 C -0.104 4.104 8 C 0.007 3.993 9 N -0.286 5.286 10 C 0.294 3.706 11 O -0.366 6.366 12 C 0.277 3.723 13 O -0.415 6.415 14 N -0.307 5.307 15 C 0.036 3.964 16 C 0.019 3.981 17 C -0.542 4.542 18 H 0.080 0.920 19 C -0.129 4.129 20 N -0.509 5.509 21 Si 0.717 3.283 22 H -0.206 1.206 23 H -0.211 1.211 24 H -0.196 1.196 25 C -0.247 4.247 26 C -0.178 4.178 27 H 0.104 0.896 28 H 0.106 0.894 29 H 0.098 0.902 30 H 0.168 0.832 31 H 0.193 0.807 32 H 0.266 0.734 33 H 0.254 0.746 34 H 0.093 0.907 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.098 0.902 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.749 16.788 9.482 19.295 hybrid contribution 1.092 -0.448 -0.910 1.490 sum 1.841 16.340 8.572 18.544 Atomic orbital electron populations 1.20783 0.87662 1.04498 1.03781 1.20931 0.97048 0.85531 0.98276 1.66785 1.08459 1.28701 1.13056 1.21573 0.89738 0.87563 1.02008 1.98400 1.76817 1.28794 1.96614 1.21809 1.01942 0.90381 1.01598 1.22173 0.92702 0.99948 0.95626 1.18686 0.92433 0.86084 1.02106 1.43167 1.20037 1.06047 1.59398 1.20868 0.87202 0.85351 0.77225 1.90694 1.16498 1.84461 1.44911 1.19539 0.87343 0.84538 0.80925 1.90744 1.15396 1.85504 1.49843 1.45897 1.13855 1.08815 1.62085 1.21227 0.93516 0.82365 0.99313 1.19018 0.96977 0.88234 0.93846 1.20357 0.98370 1.46384 0.89092 0.91951 1.24983 0.94739 0.94325 0.98861 1.69974 1.17936 1.40034 1.22997 0.86629 0.80342 0.79007 0.82362 1.20570 1.21129 1.19568 1.23070 0.98604 1.08881 0.94156 1.22474 0.95415 0.98945 1.00930 0.89635 0.89410 0.90155 0.83218 0.80742 0.73372 0.74630 0.90671 0.93132 0.92757 0.90201 0.91608 0.91683 0.89356 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.87 9.62 36.00 0.35 -0.52 16 2 C 0.12 1.35 6.80 -82.36 -0.56 0.79 16 3 N -0.46 -5.52 10.25 -6.45 -0.07 -5.58 16 4 C 0.16 1.77 7.27 -17.43 -0.13 1.64 16 5 Cl -0.03 -0.35 29.10 -51.86 -1.51 -1.85 16 6 C -0.14 -1.40 9.87 -39.44 -0.39 -1.79 16 7 C -0.08 -0.89 8.90 -39.09 -0.35 -1.24 16 8 C 0.11 1.21 6.45 -83.58 -0.54 0.68 16 9 N -0.64 -7.38 4.95 -10.19 -0.05 -7.43 16 10 C 0.51 7.36 7.78 -11.63 -0.09 7.27 16 11 O -0.49 -7.79 13.46 5.47 0.07 -7.71 16 12 C 0.50 8.34 7.88 -11.63 -0.09 8.25 16 13 O -0.54 -9.68 16.48 5.49 0.09 -9.59 16 14 N -0.66 -12.05 5.40 -60.76 -0.33 -12.38 16 15 C 0.16 3.26 5.58 -4.04 -0.02 3.23 16 16 C 0.02 0.44 1.60 -155.66 -0.25 0.19 16 17 C -0.50 -12.44 8.14 -34.44 -0.28 -12.72 16 18 H 0.06 1.53 7.82 -52.48 -0.41 1.12 16 19 C 0.08 1.93 5.43 -17.82 -0.10 1.83 16 20 N -0.87 -23.21 12.65 55.43 0.70 -22.51 16 21 Si 0.89 20.11 29.54 -169.99 -5.02 15.09 16 22 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 23 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 24 H -0.27 -6.11 7.11 56.52 0.40 -5.70 16 25 C -0.21 -4.14 9.93 -26.69 -0.27 -4.40 16 26 C -0.14 -3.01 9.18 -26.69 -0.24 -3.25 16 27 H 0.09 0.53 8.14 -51.93 -0.42 0.11 16 28 H 0.09 0.67 8.14 -51.92 -0.42 0.25 16 29 H 0.08 0.59 6.99 -51.93 -0.36 0.23 16 30 H 0.15 1.18 8.06 -52.49 -0.42 0.76 16 31 H 0.18 2.11 5.62 -52.48 -0.29 1.82 16 32 H 0.43 4.13 6.93 -40.82 -0.28 3.85 16 33 H 0.42 7.60 7.49 -40.82 -0.31 7.30 16 34 H 0.08 1.74 8.14 -51.93 -0.42 1.32 16 35 H 0.05 0.99 8.06 -51.93 -0.42 0.57 16 36 H 0.26 6.74 8.32 -40.82 -0.34 6.40 16 37 H 0.08 1.57 8.14 -51.93 -0.42 1.14 16 38 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 39 H 0.06 1.31 8.14 -51.93 -0.42 0.89 16 40 H 0.09 2.06 8.14 -51.93 -0.42 1.64 16 LS Contribution 363.85 15.07 5.48 5.48 Total: -1.00 -27.95 363.85 -8.18 -36.13 By element: Atomic # 1 Polarization: 15.00 SS G_CDS: -4.59 Total: 10.40 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -2.96 Total: -0.04 kcal Atomic # 7 Polarization: -48.16 SS G_CDS: 0.26 Total: -47.90 kcal Atomic # 8 Polarization: -17.47 SS G_CDS: 0.16 Total: -17.30 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.02 Total: 15.09 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.51 Total: -1.85 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -27.95 -8.18 -36.13 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000797539097.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.528 kcal (2) G-P(sol) polarization free energy of solvation -27.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds