Wall clock time and date at job start Tue Mar 31 2020 19:39:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38485 * 120.81637 * 2 1 4 4 C 1.38393 * 119.23521 * 180.29696 * 3 2 1 5 5 Cl 1.73601 * 119.55271 * 179.70117 * 4 3 2 6 6 N 1.31975 * 120.89508 * 359.72660 * 4 3 2 7 7 C 1.31807 * 121.78712 * 359.97438 * 6 4 3 8 8 C 1.38900 * 120.67024 * 0.02659 * 7 6 4 9 9 N 1.39797 * 120.48108 * 179.97438 * 8 7 6 10 10 C 1.34776 * 119.99713 * 332.56512 * 9 8 7 11 11 O 1.21384 * 120.00205 * 4.40818 * 10 9 8 12 12 C 1.49351 * 119.99922 * 184.40441 * 10 9 8 13 13 O 1.21355 * 119.99983 * 5.13511 * 12 10 9 14 14 N 1.34778 * 119.99893 * 185.13284 * 12 10 9 15 15 C 1.46504 * 119.99834 * 185.08122 * 14 12 10 16 16 C 1.52999 * 109.46887 * 184.69269 * 15 14 12 17 17 C 1.50699 * 115.55099 * 303.89186 * 16 15 14 18 18 H 1.08002 * 119.99949 * 95.27214 * 17 16 15 19 19 C 1.37875 * 120.00046 * 274.99246 * 17 16 15 20 20 N 1.31512 * 119.99692 * 355.55788 * 19 17 16 21 21 Si 1.86797 * 120.00400 * 175.55500 * 19 17 16 22 22 H 1.48491 * 109.47258 * 89.99757 * 21 19 17 23 23 H 1.48492 * 109.47511 * 210.00310 * 21 19 17 24 24 H 1.48506 * 109.46659 * 330.00264 * 21 19 17 25 25 C 1.53004 * 117.49788 * 89.56198 * 16 15 14 26 26 C 1.53003 * 117.49776 * 158.22002 * 16 15 14 27 27 H 1.09002 * 109.46688 * 270.22643 * 1 2 3 28 28 H 1.09002 * 109.47159 * 30.22088 * 1 2 3 29 29 H 1.08993 * 109.47125 * 150.22713 * 1 2 3 30 30 H 1.08005 * 120.38445 * 0.02562 * 3 2 1 31 31 H 1.07994 * 119.66684 * 179.97438 * 7 6 4 32 32 H 0.96997 * 120.00050 * 152.57001 * 9 8 7 33 33 H 0.96996 * 120.00137 * 5.07582 * 14 12 10 34 34 H 1.08998 * 109.47232 * 64.69102 * 15 14 12 35 35 H 1.09001 * 109.46844 * 304.68828 * 15 14 12 36 36 H 0.97002 * 119.99850 * 184.99933 * 20 19 17 37 37 H 1.08998 * 117.50014 * 214.99914 * 25 16 15 38 38 H 1.09001 * 117.49903 * 0.02562 * 25 16 15 39 39 H 1.08997 * 117.49560 * 359.97438 * 26 16 15 40 40 H 1.08999 * 117.49750 * 144.97236 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2165 1.1893 0.0000 4 6 3.5999 1.1511 -0.0063 5 17 4.4974 2.6371 -0.0142 6 7 4.2460 0.0004 -0.0068 7 6 3.6091 -1.1535 -0.0009 8 6 2.2208 -1.1965 0.0055 9 7 1.5492 -2.4226 0.0112 10 6 2.1317 -3.5123 -0.5270 11 8 3.2698 -3.4486 -0.9442 12 6 1.3769 -4.7984 -0.6099 13 8 0.2099 -4.8394 -0.2793 14 7 1.9917 -5.9134 -1.0519 15 6 1.2247 -7.1475 -1.2390 16 6 2.1728 -8.2825 -1.6312 17 6 3.0176 -8.0307 -2.8535 18 1 4.0216 -7.6476 -2.7464 19 6 2.5107 -8.2950 -4.1082 20 7 1.3243 -8.8481 -4.2349 21 14 3.5091 -7.8675 -5.6280 22 1 4.3625 -9.0239 -6.0011 23 1 2.5904 -7.5478 -6.7500 24 1 4.3681 -6.6906 -5.3409 25 6 2.7930 -9.1071 -0.5014 26 6 1.6994 -9.7161 -1.3826 27 1 -0.3633 0.0041 1.0277 28 1 -0.3633 0.8880 -0.5173 29 1 -0.3633 -0.8920 -0.5103 30 1 1.6962 2.1358 0.0004 31 1 4.1723 -2.0750 -0.0020 32 1 0.6641 -2.4890 0.4023 33 1 2.9419 -5.8986 -1.2462 34 1 0.4874 -7.0009 -2.0282 35 1 0.7162 -7.4037 -0.3096 36 1 0.9982 -9.1005 -5.1129 37 1 3.8120 -9.4676 -0.6422 38 1 2.5252 -8.8413 0.5212 39 1 0.7128 -9.8505 -0.9393 40 1 1.9987 -10.4770 -2.1034 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000797539616.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:39:54 Heat of formation + Delta-G solvation = -13.317959 kcal Electronic energy + Delta-G solvation = -25867.488696 eV Core-core repulsion = 21902.188949 eV Total energy + Delta-G solvation = -3965.299747 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.48497 -40.03838 -38.46559 -36.95604 -36.84066 -35.74326 -33.97530 -33.38545 -32.05070 -30.40156 -28.39032 -27.19611 -25.60626 -24.71613 -23.17365 -22.18630 -21.22800 -20.30982 -19.70238 -18.59159 -17.78594 -17.10640 -16.92564 -16.27648 -16.14197 -15.67281 -15.06826 -14.80228 -14.70940 -14.60577 -14.11424 -13.85373 -13.67821 -13.56182 -13.31794 -13.25025 -12.81574 -12.39839 -12.12580 -12.01538 -11.71647 -11.57886 -11.46987 -11.06318 -11.02935 -11.00173 -10.57606 -10.31055 -10.00584 -9.80828 -9.72072 -9.43747 -9.16612 -8.68081 -8.56098 -8.50532 -8.23378 -6.15931 -4.26483 0.46284 0.75909 1.51304 1.55804 2.25800 3.18933 3.22860 3.31148 3.35039 3.39414 3.68042 4.13593 4.24084 4.30233 4.47071 4.52993 4.68137 4.87881 5.10370 5.11818 5.22665 5.25130 5.37126 5.44540 5.66771 5.75387 5.86708 6.18207 6.29820 6.31666 6.36802 6.56335 6.66776 6.70850 6.90588 7.01260 7.21058 7.35387 7.43640 7.54648 7.74142 7.89498 8.22161 8.31863 8.76294 9.42388 10.90883 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.015502 B = 0.002574 C = 0.002396 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1805.816942 B =10876.463973 C =11681.619299 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.058 4.058 3 C -0.136 4.136 4 C 0.156 3.844 5 Cl -0.035 7.035 6 N -0.460 5.460 7 C 0.115 3.885 8 C 0.100 3.900 9 N -0.641 5.641 10 C 0.510 3.490 11 O -0.490 6.490 12 C 0.499 3.501 13 O -0.537 6.537 14 N -0.657 5.657 15 C 0.158 3.842 16 C 0.020 3.980 17 C -0.504 4.504 18 H 0.063 0.937 19 C 0.075 3.925 20 N -0.874 5.874 21 Si 0.889 3.111 22 H -0.280 1.280 23 H -0.286 1.286 24 H -0.271 1.271 25 C -0.210 4.210 26 C -0.140 4.140 27 H 0.084 0.916 28 H 0.081 0.919 29 H 0.077 0.923 30 H 0.149 0.851 31 H 0.192 0.808 32 H 0.426 0.574 33 H 0.417 0.583 34 H 0.075 0.925 35 H 0.050 0.950 36 H 0.262 0.738 37 H 0.080 0.920 38 H 0.065 0.935 39 H 0.064 0.936 40 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.959 17.760 10.029 20.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.068 4.068 3 C -0.157 4.157 4 C -0.009 4.009 5 Cl -0.006 7.006 6 N -0.171 5.171 7 C -0.044 4.044 8 C 0.002 3.998 9 N -0.288 5.288 10 C 0.293 3.707 11 O -0.363 6.363 12 C 0.278 3.722 13 O -0.416 6.416 14 N -0.306 5.306 15 C 0.036 3.964 16 C 0.019 3.981 17 C -0.542 4.542 18 H 0.081 0.919 19 C -0.129 4.129 20 N -0.510 5.510 21 Si 0.717 3.283 22 H -0.206 1.206 23 H -0.212 1.212 24 H -0.195 1.195 25 C -0.247 4.247 26 C -0.178 4.178 27 H 0.102 0.898 28 H 0.100 0.900 29 H 0.096 0.904 30 H 0.167 0.833 31 H 0.209 0.791 32 H 0.265 0.735 33 H 0.254 0.746 34 H 0.093 0.907 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.098 0.902 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.172 17.777 9.743 20.306 hybrid contribution -0.306 0.286 -0.929 1.019 sum -1.478 18.063 8.815 20.153 Atomic orbital electron populations 1.20838 0.88899 1.04411 1.03559 1.20099 0.97336 0.90721 0.98675 1.21523 0.92238 0.99123 1.02842 1.21651 0.88888 0.88787 1.01555 1.98400 1.76616 1.29049 1.96578 1.67168 1.40621 0.97098 1.12198 1.23423 0.90119 0.96094 0.94808 1.18829 0.93185 0.85410 1.02351 1.43144 1.21856 1.06164 1.57620 1.20882 0.86885 0.85530 0.77406 1.90726 1.17127 1.84049 1.44390 1.19510 0.87151 0.84548 0.81030 1.90741 1.16116 1.85284 1.49445 1.45903 1.14603 1.09351 1.60758 1.21229 0.93954 0.82083 0.99141 1.19020 0.96821 0.88333 0.93911 1.20368 0.99431 1.45582 0.88782 0.91913 1.24982 0.94648 0.94346 0.98940 1.69980 1.17358 1.39756 1.23905 0.86626 0.79994 0.79130 0.82597 1.20568 1.21153 1.19524 1.23070 0.98144 1.08996 0.94481 1.22475 0.95553 0.98772 1.00970 0.89767 0.89977 0.90430 0.83323 0.79135 0.73512 0.74580 0.90673 0.93137 0.92785 0.90182 0.91599 0.91697 0.89358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.73 9.53 36.01 0.34 -0.39 16 2 C -0.06 -0.53 5.93 -104.13 -0.62 -1.15 16 3 C -0.14 -1.22 9.57 -39.43 -0.38 -1.60 16 4 C 0.16 1.77 7.27 -17.43 -0.13 1.65 16 5 Cl -0.03 -0.35 29.10 -51.86 -1.51 -1.86 16 6 N -0.46 -6.21 10.33 -10.19 -0.11 -6.32 16 7 C 0.12 1.52 9.95 -17.32 -0.17 1.35 16 8 C 0.10 1.15 6.43 -83.58 -0.54 0.61 16 9 N -0.64 -7.34 4.94 -10.19 -0.05 -7.39 16 10 C 0.51 7.43 7.77 -11.63 -0.09 7.34 16 11 O -0.49 -8.00 13.53 5.47 0.07 -7.92 16 12 C 0.50 8.40 7.88 -11.63 -0.09 8.31 16 13 O -0.54 -9.70 16.48 5.49 0.09 -9.60 16 14 N -0.66 -12.14 5.40 -60.76 -0.33 -12.47 16 15 C 0.16 3.28 5.58 -4.04 -0.02 3.25 16 16 C 0.02 0.44 1.60 -155.66 -0.25 0.19 16 17 C -0.50 -12.54 8.15 -34.44 -0.28 -12.82 16 18 H 0.06 1.55 7.82 -52.49 -0.41 1.14 16 19 C 0.08 1.94 5.43 -17.82 -0.10 1.84 16 20 N -0.87 -23.33 12.65 55.43 0.70 -22.63 16 21 Si 0.89 20.29 29.54 -169.99 -5.02 15.27 16 22 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 23 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 24 H -0.27 -6.18 7.11 56.52 0.40 -5.77 16 25 C -0.21 -4.17 9.93 -26.69 -0.27 -4.43 16 26 C -0.14 -3.03 9.18 -26.69 -0.25 -3.27 16 27 H 0.08 0.39 8.14 -51.93 -0.42 -0.04 16 28 H 0.08 0.39 8.10 -51.93 -0.42 -0.03 16 29 H 0.08 0.51 7.16 -51.93 -0.37 0.14 16 30 H 0.15 0.91 8.06 -52.48 -0.42 0.48 16 31 H 0.19 2.67 5.66 -52.49 -0.30 2.37 16 32 H 0.43 4.05 7.15 -40.82 -0.29 3.76 16 33 H 0.42 7.71 7.51 -40.82 -0.31 7.40 16 34 H 0.08 1.74 8.14 -51.93 -0.42 1.32 16 35 H 0.05 0.99 8.06 -51.93 -0.42 0.57 16 36 H 0.26 6.76 8.32 -40.82 -0.34 6.42 16 37 H 0.08 1.59 8.14 -51.93 -0.42 1.16 16 38 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 39 H 0.06 1.32 8.14 -51.93 -0.42 0.89 16 40 H 0.09 2.07 8.14 -51.93 -0.42 1.65 16 LS Contribution 364.20 15.07 5.49 5.49 Total: -1.00 -28.34 364.20 -8.10 -36.44 By element: Atomic # 1 Polarization: 14.72 SS G_CDS: -4.61 Total: 10.11 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: -2.83 Total: 0.89 kcal Atomic # 7 Polarization: -49.02 SS G_CDS: 0.22 Total: -48.81 kcal Atomic # 8 Polarization: -17.69 SS G_CDS: 0.16 Total: -17.53 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.02 Total: 15.27 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.51 Total: -1.86 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -28.34 -8.10 -36.44 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000797539616.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.124 kcal (2) G-P(sol) polarization free energy of solvation -28.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.216 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds