Wall clock time and date at job start Tue Mar 31 2020 20:43:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34230 * 117.00084 * 2 1 4 4 O 1.20829 * 120.00068 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00318 * 180.02562 * 3 2 1 6 6 C 1.53003 * 109.47293 * 180.02562 * 5 3 2 7 7 N 1.46501 * 109.46827 * 179.97438 * 6 5 3 8 8 C 1.36935 * 119.99793 * 264.02168 * 7 6 5 9 9 H 1.08002 * 119.99724 * 188.78240 * 8 7 6 10 10 C 1.38814 * 120.00437 * 8.78558 * 8 7 6 11 11 N 1.31624 * 119.99682 * 24.74253 * 10 8 7 12 12 Si 1.86797 * 120.00328 * 204.74478 * 10 8 7 13 13 H 1.48495 * 109.47281 * 84.97964 * 12 10 8 14 14 H 1.48503 * 109.46940 * 204.98423 * 12 10 8 15 15 H 1.48500 * 109.46835 * 324.97841 * 12 10 8 16 16 C 1.46492 * 119.99932 * 84.03033 * 7 6 5 17 17 C 1.50707 * 109.47118 * 269.99411 * 16 7 6 18 18 C 1.35116 * 126.40740 * 94.96131 * 17 16 7 19 19 N 1.33501 * 108.62188 * 180.02562 * 18 17 16 20 20 C 1.32589 * 109.15495 * 359.97438 * 19 18 17 21 21 C 1.40924 * 132.30809 * 180.02562 * 20 19 18 22 22 C 1.36010 * 119.35043 * 180.02562 * 21 20 19 23 23 C 1.40557 * 119.68948 * 359.97438 * 22 21 20 24 24 Cl 1.73602 * 119.86384 * 180.02562 * 23 22 21 25 25 C 1.35043 * 120.27252 * 359.97438 * 23 22 21 26 26 N 1.36539 * 120.58945 * 0.02562 * 25 23 22 27 27 H 1.08998 * 109.46694 * 180.02562 * 1 2 3 28 28 H 1.09007 * 109.46750 * 299.99770 * 1 2 3 29 29 H 1.08997 * 109.47305 * 59.99663 * 1 2 3 30 30 H 1.08994 * 109.47292 * 59.99473 * 5 3 2 31 31 H 1.09005 * 109.46499 * 299.99620 * 5 3 2 32 32 H 1.08996 * 109.46976 * 60.00029 * 6 5 3 33 33 H 1.08996 * 109.47062 * 299.99859 * 6 5 3 34 34 H 0.97002 * 120.00112 * 180.02562 * 11 10 8 35 35 H 1.09003 * 109.47648 * 149.99627 * 16 7 6 36 36 H 1.08997 * 109.47342 * 29.99649 * 16 7 6 37 37 H 1.07999 * 125.68936 * 0.02562 * 18 17 16 38 38 H 1.08004 * 120.32517 * 0.02562 * 21 20 19 39 39 H 1.07997 * 120.15743 * 180.27685 * 22 21 20 40 40 H 1.07997 * 119.70417 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2749 -0.0006 6 6 4.0002 2.7422 0.0002 7 7 5.4632 2.8188 0.0002 8 6 6.1404 2.9773 1.1798 9 1 7.2020 3.1757 1.1705 10 6 5.4625 2.8830 2.3875 11 7 4.3458 2.1904 2.4630 12 14 6.1352 3.7389 3.9055 13 1 5.6770 5.1513 3.9213 14 1 5.6438 3.0454 5.1233 15 1 7.6194 3.7001 3.8787 16 6 6.2015 2.7260 -1.2616 17 6 6.5287 1.2829 -1.5472 18 6 5.8119 0.4353 -2.3176 19 7 6.4217 -0.7523 -2.3261 20 6 7.5147 -0.6855 -1.5785 21 6 8.5024 -1.6372 -1.2552 22 6 9.5345 -1.2781 -0.4455 23 6 9.6023 0.0332 0.0560 24 17 10.9181 0.4966 1.0893 25 6 8.6487 0.9344 -0.2637 26 7 7.6077 0.5861 -1.0756 27 1 -0.3632 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 3.9558 0.7810 -0.8907 31 1 3.9564 0.7807 0.8892 32 1 3.6108 3.2356 0.8906 33 1 3.6101 3.2368 -0.8893 34 1 3.8719 2.1248 3.3068 35 1 7.1252 3.2997 -1.1852 36 1 5.5907 3.1270 -2.0704 37 1 4.8981 0.6781 -2.8394 38 1 8.4404 -2.6420 -1.6466 39 1 10.3011 -1.9958 -0.1929 40 1 8.7101 1.9396 0.1264 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000877709267.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:43:20 Heat of formation + Delta-G solvation = 28.787400 kcal Electronic energy + Delta-G solvation = -27411.087939 eV Core-core repulsion = 23447.614018 eV Total energy + Delta-G solvation = -3963.473922 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.43924 -39.68078 -37.61349 -36.52635 -35.99697 -35.58767 -33.44512 -31.76592 -30.68737 -29.71583 -28.81916 -27.27481 -25.66911 -24.28831 -23.36047 -22.27073 -21.49837 -20.51967 -19.78027 -17.30055 -17.14822 -16.76158 -16.54582 -16.02951 -15.85542 -15.70256 -15.59337 -14.99938 -14.44087 -13.83614 -13.66019 -13.50363 -13.37661 -13.04556 -12.86014 -12.75059 -12.54451 -12.01824 -11.77458 -11.72268 -11.64617 -11.15082 -11.00812 -10.96345 -10.88685 -10.81439 -10.61115 -10.29998 -10.27145 -10.10150 -9.75363 -9.69788 -9.62731 -8.65011 -8.33918 -7.46512 -7.19492 -6.04181 -3.35302 0.91019 1.45592 1.92553 3.03933 3.08368 3.22624 3.27994 3.35802 3.37545 3.46406 3.75726 4.33065 4.47431 4.74490 4.85785 5.07920 5.22160 5.27220 5.41742 5.42511 5.48273 5.61830 5.68251 5.72152 5.81670 5.94929 5.98277 6.09315 6.22772 6.24814 6.37942 6.56135 6.63620 6.75570 7.00417 7.01772 7.33378 7.37256 7.52759 7.65724 8.08259 8.21439 8.54757 8.94552 9.56352 9.99881 11.00515 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.009930 B = 0.004983 C = 0.003742 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2819.190456 B = 5618.198238 C = 7480.304579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.369 6.369 3 C 0.471 3.529 4 O -0.524 6.524 5 C -0.121 4.121 6 C 0.185 3.815 7 N -0.579 5.579 8 C -0.264 4.264 9 H 0.075 0.925 10 C 0.009 3.991 11 N -0.891 5.891 12 Si 0.902 3.098 13 H -0.285 1.285 14 H -0.291 1.291 15 H -0.279 1.279 16 C 0.208 3.792 17 C -0.035 4.035 18 C 0.015 3.985 19 N -0.485 5.485 20 C 0.196 3.804 21 C -0.066 4.066 22 C -0.104 4.104 23 C -0.080 4.080 24 Cl -0.051 7.051 25 C 0.107 3.893 26 N -0.345 5.345 27 H 0.091 0.909 28 H 0.057 0.943 29 H 0.055 0.945 30 H 0.072 0.928 31 H 0.135 0.865 32 H 0.101 0.899 33 H 0.022 0.978 34 H 0.258 0.742 35 H 0.059 0.941 36 H 0.076 0.924 37 H 0.173 0.827 38 H 0.152 0.848 39 H 0.144 0.856 40 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.573 -4.880 -6.383 9.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.286 6.286 3 C 0.316 3.684 4 O -0.413 6.413 5 C -0.161 4.161 6 C 0.059 3.941 7 N -0.297 5.297 8 C -0.392 4.392 9 H 0.093 0.907 10 C -0.190 4.190 11 N -0.535 5.535 12 Si 0.731 3.269 13 H -0.212 1.212 14 H -0.218 1.218 15 H -0.205 1.205 16 C 0.079 3.921 17 C -0.151 4.151 18 C -0.136 4.136 19 N -0.205 5.205 20 C -0.047 4.047 21 C -0.086 4.086 22 C -0.129 4.129 23 C -0.110 4.110 24 Cl -0.022 7.022 25 C -0.017 4.017 26 N -0.018 5.018 27 H 0.109 0.891 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.090 0.910 31 H 0.153 0.847 32 H 0.119 0.881 33 H 0.040 0.960 34 H 0.069 0.931 35 H 0.077 0.923 36 H 0.094 0.906 37 H 0.191 0.809 38 H 0.169 0.831 39 H 0.162 0.838 40 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 5.015 -5.149 -6.549 9.724 hybrid contribution 0.300 0.839 1.625 1.853 sum 5.316 -4.310 -4.924 8.431 Atomic orbital electron populations 1.23079 0.78334 1.02579 1.01874 1.86598 1.22039 1.35239 1.84734 1.24632 0.92981 0.80345 0.70483 1.90559 1.67668 1.36419 1.46609 1.22503 0.83970 1.04302 1.05292 1.20735 0.81530 0.91219 1.00629 1.44537 1.01714 1.81752 1.01721 1.19197 0.93635 1.43122 0.83281 0.90748 1.24753 0.97611 0.98975 0.97645 1.69996 1.19007 1.38725 1.25739 0.86316 0.78406 0.79918 0.82262 1.21172 1.21756 1.20473 1.19589 0.96725 0.85734 0.90069 1.23367 0.88956 1.00653 1.02166 1.22134 1.00793 0.88813 1.01817 1.70642 1.05305 1.23851 1.20669 1.20868 0.98198 0.85215 1.00377 1.20059 0.91385 0.98544 0.98621 1.20739 0.99415 0.94430 0.98270 1.19869 0.93923 0.94985 1.02225 1.98366 1.45721 1.92415 1.65724 1.21307 0.86307 1.00948 0.93167 1.42581 1.16558 1.11696 1.30992 0.89074 0.92468 0.92618 0.90955 0.84699 0.88084 0.96001 0.93139 0.92282 0.90573 0.80939 0.83064 0.83841 0.81261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.52 10.56 101.05 1.07 1.58 16 2 O -0.37 -7.01 10.57 -39.26 -0.41 -7.43 16 3 C 0.47 9.95 7.96 36.01 0.29 10.24 16 4 O -0.52 -11.92 15.73 -18.75 -0.29 -12.22 16 5 C -0.12 -2.61 5.47 -27.88 -0.15 -2.76 16 6 C 0.18 4.11 4.21 -4.04 -0.02 4.09 16 7 N -0.58 -12.50 2.52 -174.61 -0.44 -12.94 16 8 C -0.26 -6.26 9.70 -15.06 -0.15 -6.41 16 9 H 0.07 1.71 7.22 -52.49 -0.38 1.33 16 10 C 0.01 0.23 4.90 -17.43 -0.09 0.14 16 11 N -0.89 -23.18 8.57 55.49 0.48 -22.70 16 12 Si 0.90 20.33 29.62 -169.99 -5.04 15.29 16 13 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 14 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 15 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 16 C 0.21 3.68 6.13 -5.19 -0.03 3.65 16 17 C -0.03 -0.62 6.21 -81.47 -0.51 -1.13 16 18 C 0.02 0.27 9.77 -17.94 -0.18 0.09 16 19 N -0.49 -9.01 11.32 -12.78 -0.14 -9.16 16 20 C 0.20 3.44 7.81 -156.04 -1.22 2.22 16 21 C -0.07 -0.91 10.10 -39.37 -0.40 -1.31 16 22 C -0.10 -1.32 9.86 -39.51 -0.39 -1.71 16 23 C -0.08 -1.13 6.28 -39.84 -0.25 -1.38 16 24 Cl -0.05 -0.65 28.94 -51.86 -1.50 -2.15 16 25 C 0.11 1.73 10.60 -16.59 -0.18 1.55 16 26 N -0.35 -6.10 2.95 -58.43 -0.17 -6.27 16 27 H 0.09 1.01 8.14 -51.93 -0.42 0.58 16 28 H 0.06 0.83 8.14 -51.92 -0.42 0.41 16 29 H 0.06 0.76 8.13 -51.93 -0.42 0.33 16 30 H 0.07 1.47 5.39 -51.93 -0.28 1.19 16 31 H 0.14 3.37 6.29 -51.93 -0.33 3.04 16 32 H 0.10 2.61 5.83 -51.93 -0.30 2.31 16 33 H 0.02 0.46 7.94 -51.93 -0.41 0.05 16 34 H 0.26 6.74 8.31 -40.82 -0.34 6.40 16 35 H 0.06 0.99 8.03 -51.93 -0.42 0.57 16 36 H 0.08 1.18 7.95 -51.93 -0.41 0.77 16 37 H 0.17 2.66 7.82 -52.49 -0.41 2.25 16 38 H 0.15 1.69 8.06 -52.48 -0.42 1.27 16 39 H 0.14 1.37 8.06 -52.49 -0.42 0.94 16 40 H 0.17 2.70 7.35 -52.49 -0.39 2.32 16 LS Contribution 353.75 15.07 5.33 5.33 Total: -1.00 -28.92 353.75 -8.96 -37.88 By element: Atomic # 1 Polarization: 10.06 SS G_CDS: -4.57 Total: 5.49 kcal Atomic # 6 Polarization: 11.06 SS G_CDS: -2.19 Total: 8.87 kcal Atomic # 7 Polarization: -50.79 SS G_CDS: -0.28 Total: -51.08 kcal Atomic # 8 Polarization: -18.93 SS G_CDS: -0.71 Total: -19.64 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -5.04 Total: 15.29 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -1.50 Total: -2.15 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -28.92 -8.96 -37.88 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000877709267.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.669 kcal (2) G-P(sol) polarization free energy of solvation -28.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.882 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds