Wall clock time and date at job start Tue Mar 31 2020 19:44:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53007 * 109.46922 * 2 1 4 4 O 1.42892 * 109.47493 * 119.99839 * 2 1 3 5 5 C 1.50705 * 109.47386 * 240.00436 * 2 1 3 6 6 C 1.35344 * 126.75508 * 184.99903 * 5 2 1 7 7 N 1.35315 * 106.17602 * 179.97438 * 6 5 2 8 8 C 1.46502 * 125.86683 * 180.02562 * 7 6 5 9 9 C 1.50694 * 109.47146 * 124.99947 * 8 7 6 10 10 C 1.38105 * 120.03268 * 265.00168 * 9 8 7 11 11 C 1.38387 * 120.06069 * 180.02562 * 10 9 8 12 12 Cl 1.73603 * 119.94441 * 179.97438 * 11 10 9 13 13 C 1.38423 * 120.11134 * 359.97438 * 11 10 9 14 14 C 1.38070 * 120.05530 * 359.96372 * 13 11 10 15 15 C 1.38865 * 120.02626 * 84.72268 * 9 8 7 16 16 O 1.35765 * 120.05397 * 0.02562 * 15 9 8 17 17 C 1.34826 * 116.99683 * 174.14483 * 16 15 9 18 18 H 1.08008 * 119.99944 * 5.06617 * 17 16 15 19 19 C 1.38648 * 119.99951 * 185.06376 * 17 16 15 20 20 N 1.31556 * 119.99815 * 0.02562 * 19 17 16 21 21 Si 1.86801 * 119.99748 * 180.02562 * 19 17 16 22 22 H 1.48504 * 109.47302 * 60.00490 * 21 19 17 23 23 H 1.48503 * 109.46692 * 179.97438 * 21 19 17 24 24 H 1.48494 * 109.47388 * 299.99865 * 21 19 17 25 25 N 1.28707 * 108.26395 * 359.97438 * 7 6 5 26 26 N 1.28644 * 110.17972 * 359.72062 * 25 7 6 27 27 H 1.08997 * 109.47295 * 60.00345 * 1 2 3 28 28 H 1.08997 * 109.47155 * 299.99837 * 1 2 3 29 29 H 1.09005 * 109.46866 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47073 * 60.00112 * 3 2 1 31 31 H 1.08998 * 109.46981 * 179.97438 * 3 2 1 32 32 H 1.08997 * 109.46854 * 299.99925 * 3 2 1 33 33 H 0.96699 * 114.00594 * 179.97438 * 4 2 1 34 34 H 1.08002 * 126.90978 * 0.03360 * 6 5 2 35 35 H 1.08998 * 109.46769 * 245.00180 * 8 7 6 36 36 H 1.09002 * 109.47153 * 5.00303 * 8 7 6 37 37 H 1.08008 * 119.97150 * 359.97157 * 10 9 8 38 38 H 1.08000 * 119.97531 * 179.97438 * 13 11 10 39 39 H 1.08008 * 120.02882 * 180.02562 * 14 13 11 40 40 H 0.96997 * 119.99774 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 8 2.0064 -0.6736 1.1667 5 6 2.0324 -0.7103 -1.2305 6 6 3.3209 -0.9939 -1.5327 7 7 3.2964 -1.6345 -2.7243 8 6 4.4639 -2.1373 -3.4527 9 6 4.2806 -3.6043 -3.7442 10 6 4.8165 -4.5505 -2.8929 11 6 4.6490 -5.8979 -3.1604 12 17 5.3246 -7.0848 -2.0886 13 6 3.9436 -6.3009 -4.2812 14 6 3.4046 -5.3590 -5.1348 15 6 3.5675 -4.0060 -4.8661 16 8 3.0352 -3.0778 -5.7018 17 6 2.4608 -3.5314 -6.8341 18 1 2.3661 -4.5939 -7.0034 19 6 1.9918 -2.6339 -7.7811 20 7 2.1076 -1.3398 -7.5750 21 14 1.1953 -3.2624 -9.3495 22 1 0.0026 -4.0781 -9.0067 23 1 0.7814 -2.1105 -10.1904 24 1 2.1680 -4.0981 -10.0982 25 7 2.0712 -1.7272 -3.1074 26 7 1.2919 -1.1911 -2.2355 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.6766 1.9564 0.8900 31 1 3.1300 1.4426 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 2.9704 -0.7121 1.2327 34 1 4.1930 -0.7573 -0.9412 35 1 4.5703 -1.5910 -4.3899 36 1 5.3587 -1.9965 -2.8464 37 1 5.3678 -4.2387 -2.0180 38 1 3.8145 -7.3531 -4.4880 39 1 2.8539 -5.6739 -6.0089 40 1 1.7791 -0.7119 -8.2373 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000881303350.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:44:23 Heat of formation + Delta-G solvation = 37.278613 kcal Electronic energy + Delta-G solvation = -26735.193825 eV Core-core repulsion = 22772.088110 eV Total energy + Delta-G solvation = -3963.105715 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.83587 -39.47936 -37.98850 -36.98517 -35.78369 -34.46049 -32.51442 -32.41842 -31.01952 -29.88767 -28.99557 -27.42168 -26.45131 -25.54521 -23.15352 -22.17401 -21.78346 -20.90614 -19.96834 -18.26009 -17.80036 -17.12450 -16.36809 -15.89701 -15.47631 -15.05348 -14.84494 -14.71840 -14.56964 -14.33055 -13.94207 -13.73520 -13.13810 -12.99495 -12.69439 -12.49633 -12.46862 -12.22521 -12.09212 -11.91453 -11.71921 -11.44361 -11.40254 -11.19050 -11.14381 -10.90638 -10.60276 -10.56441 -10.49866 -10.34537 -10.19809 -9.77953 -9.45922 -8.96598 -8.83913 -8.57146 -7.42850 -6.63346 -4.20323 1.60680 1.93939 2.06025 2.68900 2.91727 2.94697 3.05054 3.06554 3.09129 3.82177 4.20269 4.30898 4.41829 4.72177 4.86612 4.93129 4.97524 4.98085 5.03637 5.04711 5.39787 5.43009 5.56166 5.60256 5.65428 5.80461 5.88343 5.91776 5.95814 6.07322 6.18439 6.22317 6.40149 6.42977 6.47523 6.67383 6.70640 6.96092 7.01163 7.10378 7.36851 7.57751 7.77709 8.80407 9.05640 9.41652 10.51983 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.007561 B = 0.004776 C = 0.003142 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3702.239979 B = 5860.819710 C = 8908.066048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C 0.217 3.783 3 C -0.170 4.170 4 O -0.553 6.553 5 C -0.058 4.058 6 C -0.063 4.063 7 N -0.271 5.271 8 C 0.175 3.825 9 C -0.199 4.199 10 C -0.035 4.035 11 C -0.136 4.136 12 Cl -0.103 7.103 13 C -0.045 4.045 14 C -0.224 4.224 15 C 0.182 3.818 16 O -0.141 6.141 17 C -0.394 4.394 18 H 0.095 0.905 19 C 0.048 3.952 20 N -0.844 5.844 21 Si 0.942 3.058 22 H -0.267 1.267 23 H -0.276 1.276 24 H -0.268 1.268 25 N -0.030 5.030 26 N -0.272 5.272 27 H 0.076 0.924 28 H 0.060 0.940 29 H 0.066 0.934 30 H 0.068 0.932 31 H 0.058 0.942 32 H 0.069 0.931 33 H 0.373 0.627 34 H 0.180 0.820 35 H 0.113 0.887 36 H 0.103 0.897 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.139 0.861 40 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.536 1.114 10.827 12.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.175 3.825 3 C -0.229 4.229 4 O -0.357 6.357 5 C -0.198 4.198 6 C -0.214 4.214 7 N -0.065 5.065 8 C 0.056 3.944 9 C -0.202 4.202 10 C -0.055 4.055 11 C -0.163 4.163 12 Cl -0.075 7.075 13 C -0.064 4.064 14 C -0.244 4.244 15 C 0.123 3.877 16 O -0.041 6.041 17 C -0.469 4.469 18 H 0.112 0.888 19 C -0.160 4.160 20 N -0.476 5.476 21 Si 0.766 3.234 22 H -0.192 1.192 23 H -0.201 1.201 24 H -0.193 1.193 25 N -0.011 5.011 26 N -0.139 5.139 27 H 0.095 0.905 28 H 0.079 0.921 29 H 0.085 0.915 30 H 0.087 0.913 31 H 0.077 0.923 32 H 0.088 0.912 33 H 0.220 0.780 34 H 0.197 0.803 35 H 0.131 0.869 36 H 0.121 0.879 37 H 0.139 0.861 38 H 0.138 0.862 39 H 0.157 0.843 40 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 3.930 0.961 9.759 10.564 hybrid contribution 1.245 -0.185 -0.111 1.264 sum 5.175 0.776 9.648 10.975 Atomic orbital electron populations 1.21605 0.91299 1.03518 1.02094 1.19214 0.95278 0.88789 0.79231 1.22464 1.01384 0.95907 1.03095 1.86612 1.26431 1.79968 1.42721 1.22521 0.90630 1.06670 0.99933 1.23153 1.00325 1.06188 0.91756 1.47800 1.08561 1.35954 1.14145 1.20665 0.82955 0.92752 0.98007 1.18421 1.09949 0.92949 0.98895 1.20349 0.97434 0.90544 0.97140 1.20155 1.10148 0.88924 0.97041 1.98284 1.85054 1.58479 1.65683 1.20713 0.94376 0.99302 0.91995 1.21119 1.07878 0.92162 1.03233 1.19054 0.89647 0.88858 0.90103 1.83987 1.60355 1.31267 1.28463 1.21348 1.38217 0.93854 0.93485 0.88805 1.25316 0.96753 0.94882 0.99015 1.70019 1.41384 1.01053 1.35113 0.85761 0.79540 0.78511 0.79601 1.19220 1.20115 1.19335 1.78716 0.86443 1.16673 1.19231 1.75135 1.26294 1.11848 1.00594 0.90501 0.92128 0.91470 0.91285 0.92286 0.91162 0.78017 0.80316 0.86895 0.87899 0.86079 0.86164 0.84335 0.91615 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.70 8.38 37.16 0.31 -1.39 16 2 C 0.22 2.81 1.32 -91.77 -0.12 2.69 16 3 C -0.17 -1.73 8.75 37.16 0.32 -1.41 16 4 O -0.55 -6.74 12.97 -35.23 -0.46 -7.19 16 5 C -0.06 -0.95 5.83 -82.78 -0.48 -1.43 16 6 C -0.06 -0.91 11.15 -17.05 -0.19 -1.10 16 7 N -0.27 -4.87 3.43 -62.44 -0.21 -5.08 16 8 C 0.18 2.85 6.30 -5.20 -0.03 2.81 16 9 C -0.20 -3.68 5.26 -104.44 -0.55 -4.23 16 10 C -0.04 -0.58 9.46 -39.57 -0.37 -0.95 16 11 C -0.14 -2.28 6.32 -39.46 -0.25 -2.53 16 12 Cl -0.10 -1.52 28.95 -51.86 -1.50 -3.02 16 13 C -0.04 -0.78 9.82 -39.57 -0.39 -1.17 16 14 C -0.22 -4.50 9.17 -39.40 -0.36 -4.87 16 15 C 0.18 3.97 6.60 -39.11 -0.26 3.71 16 16 O -0.14 -3.62 8.90 0.01 0.00 -3.62 16 17 C -0.39 -10.17 9.49 30.88 0.29 -9.87 16 18 H 0.09 2.24 5.20 -52.48 -0.27 1.96 16 19 C 0.05 1.23 5.49 -17.52 -0.10 1.13 16 20 N -0.84 -23.27 13.67 55.48 0.76 -22.51 16 21 Si 0.94 19.51 29.55 -169.99 -5.02 14.49 16 22 H -0.27 -5.45 7.11 56.52 0.40 -5.05 16 23 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 24 H -0.27 -5.34 7.11 56.52 0.40 -4.94 16 25 N -0.03 -0.68 12.91 60.35 0.78 0.10 16 26 N -0.27 -5.64 11.79 33.29 0.39 -5.25 16 27 H 0.08 1.04 8.14 -51.93 -0.42 0.62 16 28 H 0.06 0.68 8.14 -51.93 -0.42 0.25 16 29 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 30 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 31 H 0.06 0.50 8.12 -51.93 -0.42 0.08 16 32 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 33 H 0.37 3.02 8.81 45.56 0.40 3.43 16 34 H 0.18 1.65 8.06 -52.49 -0.42 1.23 16 35 H 0.11 2.03 7.70 -51.93 -0.40 1.63 16 36 H 0.10 1.16 7.98 -51.93 -0.41 0.74 16 37 H 0.12 1.65 8.06 -52.48 -0.42 1.23 16 38 H 0.12 1.82 8.06 -52.49 -0.42 1.40 16 39 H 0.14 2.75 5.64 -52.48 -0.30 2.45 16 40 H 0.27 7.01 8.31 -40.82 -0.34 6.67 16 LS Contribution 363.48 15.07 5.48 5.48 Total: -1.00 -31.78 363.48 -5.88 -37.67 By element: Atomic # 1 Polarization: 11.49 SS G_CDS: -3.92 Total: 7.57 kcal Atomic # 6 Polarization: -16.44 SS G_CDS: -2.17 Total: -18.62 kcal Atomic # 7 Polarization: -34.46 SS G_CDS: 1.72 Total: -32.75 kcal Atomic # 8 Polarization: -10.35 SS G_CDS: -0.46 Total: -10.81 kcal Atomic # 14 Polarization: 19.51 SS G_CDS: -5.02 Total: 14.49 kcal Atomic # 17 Polarization: -1.52 SS G_CDS: -1.50 Total: -3.02 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -31.78 -5.88 -37.67 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000881303350.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.947 kcal (2) G-P(sol) polarization free energy of solvation -31.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.668 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds