Wall clock time and date at job start Tue Mar 31 2020 19:38:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38568 * 120.74695 * 2 1 4 4 C 1.38733 * 119.33704 * 180.02562 * 3 2 1 5 5 Cl 1.73598 * 119.56253 * 179.97438 * 4 3 2 6 6 N 1.31616 * 120.87329 * 359.74097 * 4 3 2 7 7 C 1.32749 * 121.62145 * 0.52686 * 6 4 3 8 8 C 1.48158 * 119.71595 * 179.75724 * 7 6 4 9 9 O 1.21518 * 120.00053 * 153.56598 * 8 7 6 10 10 N 1.34776 * 119.99883 * 333.56210 * 8 7 6 11 11 C 1.46962 * 120.59662 * 6.29628 * 10 8 7 12 12 C 1.53370 * 108.63682 * 235.25228 * 11 10 8 13 13 N 1.46965 * 108.63275 * 310.57146 * 12 11 10 14 14 C 1.34778 * 120.59094 * 235.20472 * 13 12 11 15 15 O 1.21683 * 120.00670 * 6.96849 * 14 13 12 16 16 C 1.46374 * 119.99613 * 186.96537 * 14 13 12 17 17 H 1.08003 * 120.00246 * 354.77739 * 16 14 13 18 18 C 1.40054 * 119.99918 * 174.77870 * 16 14 13 19 19 N 1.30670 * 120.00056 * 0.02562 * 18 16 14 20 20 Si 1.86797 * 119.99815 * 180.02562 * 18 16 14 21 21 H 1.48502 * 109.46982 * 180.02562 * 20 18 16 22 22 H 1.48505 * 109.47203 * 299.99590 * 20 18 16 23 23 H 1.48502 * 109.47565 * 59.99816 * 20 18 16 24 24 C 1.46965 * 118.81202 * 55.48101 * 13 12 11 25 25 C 1.46965 * 120.59587 * 186.32308 * 10 8 7 26 26 C 1.38625 * 120.74681 * 180.02562 * 2 1 3 27 27 H 1.08998 * 109.47671 * 269.98472 * 1 2 3 28 28 H 1.09005 * 109.46801 * 29.98031 * 1 2 3 29 29 H 1.09002 * 109.47391 * 149.97808 * 1 2 3 30 30 H 1.07997 * 120.33393 * 0.03623 * 3 2 1 31 31 H 1.08999 * 109.61178 * 115.49780 * 11 10 8 32 32 H 1.09000 * 109.60781 * 354.99703 * 11 10 8 33 33 H 1.09001 * 109.60769 * 190.83071 * 12 11 10 34 34 H 1.08993 * 109.61552 * 70.31796 * 12 11 10 35 35 H 0.97000 * 119.99915 * 180.02562 * 19 18 16 36 36 H 1.08997 * 109.60842 * 64.26245 * 24 13 12 37 37 H 1.08999 * 109.61106 * 184.77731 * 24 13 12 38 38 H 1.09007 * 109.60735 * 244.49856 * 25 10 8 39 39 H 1.09003 * 109.60806 * 5.00077 * 25 10 8 40 40 H 1.07995 * 120.45574 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2154 1.1909 0.0000 4 6 3.6023 1.1568 -0.0005 5 17 4.4957 2.6452 -0.0012 6 7 4.2496 0.0108 0.0041 7 6 3.6078 -1.1512 -0.0010 8 6 4.3791 -2.4162 -0.0010 9 8 3.8890 -3.4266 0.4633 10 7 5.6242 -2.4463 -0.5160 11 6 6.2823 -1.2077 -0.9548 12 6 6.7155 -1.3742 -2.4166 13 7 7.4392 -2.6463 -2.5499 14 6 8.6840 -2.6764 -3.0658 15 8 9.2677 -1.6365 -3.3081 16 6 9.3339 -3.9601 -3.3346 17 1 8.8517 -4.8812 -3.0422 18 6 10.5810 -3.9940 -3.9709 19 7 11.1647 -2.8796 -4.3243 20 14 11.4100 -5.6323 -4.3146 21 1 12.7109 -5.3965 -4.9909 22 1 11.6410 -6.3484 -3.0343 23 1 10.5376 -6.4544 -5.1911 24 6 6.7790 -3.8856 -2.1164 25 6 6.3479 -3.7184 -0.6494 26 6 2.2156 -1.1914 -0.0005 27 1 -0.3634 -0.0003 1.0276 28 1 -0.3633 0.8902 -0.5136 29 1 -0.3634 -0.8898 -0.5142 30 1 1.6931 2.1362 0.0006 31 1 7.1574 -1.0184 -0.3331 32 1 5.5850 -0.3740 -0.8725 33 1 7.3695 -0.5497 -2.7005 34 1 5.8357 -1.3846 -3.0600 35 1 12.0283 -2.9030 -4.7653 36 1 5.9036 -4.0707 -2.7388 37 1 7.4749 -4.7201 -2.2020 38 1 7.2278 -3.7079 -0.0060 39 1 5.6939 -4.5429 -0.3655 40 1 1.6954 -2.1378 -0.0014 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000934787379.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:38:44 Heat of formation + Delta-G solvation = -12.836122 kcal Electronic energy + Delta-G solvation = -26688.552610 eV Core-core repulsion = 22723.273757 eV Total energy + Delta-G solvation = -3965.278853 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.19838 -39.43278 -37.90487 -36.96160 -35.89156 -34.67396 -32.98942 -32.51387 -31.63225 -30.73740 -28.45660 -27.62163 -26.00546 -24.76342 -23.18344 -23.06004 -21.78288 -20.17040 -18.85423 -17.73842 -17.09523 -16.66903 -16.38507 -15.82825 -15.73806 -15.50690 -15.21413 -14.61901 -14.47062 -14.18032 -14.08157 -13.83029 -13.60589 -13.43249 -13.09290 -12.89382 -12.53927 -12.31043 -11.99421 -11.82138 -11.70718 -11.56185 -11.44963 -11.18963 -10.96708 -10.87182 -10.72569 -10.40908 -10.27772 -10.12332 -10.03382 -9.39750 -9.23205 -8.89379 -8.62897 -7.62513 -7.20282 -6.22840 -4.68472 0.24484 0.59606 1.42106 2.48511 2.92674 3.14038 3.19341 3.20706 3.34532 3.84168 4.06454 4.15660 4.38844 4.47178 4.52163 4.57230 4.64206 4.77733 5.06675 5.13593 5.25065 5.40028 5.44416 5.47713 5.61324 5.67142 5.71141 5.83511 5.90225 6.00617 6.04650 6.30815 6.38386 6.47701 6.59243 6.74196 7.09712 7.41816 7.49006 7.54734 8.07958 8.09824 8.29758 8.98619 9.37692 10.53560 10.71980 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.018647 B = 0.002976 C = 0.002660 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1501.208700 B = 9404.987753 C =10521.947143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.032 4.032 3 C -0.140 4.140 4 C 0.172 3.828 5 Cl -0.019 7.019 6 N -0.446 5.446 7 C 0.114 3.886 8 C 0.567 3.433 9 O -0.540 6.540 10 N -0.578 5.578 11 C 0.057 3.943 12 C 0.107 3.893 13 N -0.644 5.644 14 C 0.560 3.440 15 O -0.575 6.575 16 C -0.545 4.545 17 H 0.073 0.927 18 C 0.088 3.912 19 N -0.767 5.767 20 Si 0.907 3.093 21 H -0.280 1.280 22 H -0.267 1.267 23 H -0.268 1.268 24 C 0.111 3.889 25 C 0.093 3.907 26 C -0.114 4.114 27 H 0.083 0.917 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.150 0.850 31 H 0.071 0.929 32 H 0.142 0.858 33 H 0.095 0.905 34 H 0.041 0.959 35 H 0.269 0.731 36 H 0.047 0.953 37 H 0.106 0.894 38 H 0.075 0.925 39 H 0.093 0.907 40 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.727 6.568 8.764 23.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.040 4.040 3 C -0.161 4.161 4 C 0.007 3.993 5 Cl 0.009 6.991 6 N -0.161 5.161 7 C -0.023 4.023 8 C 0.353 3.647 9 O -0.418 6.418 10 N -0.308 5.308 11 C -0.067 4.067 12 C -0.018 4.018 13 N -0.383 5.383 14 C 0.366 3.634 15 O -0.458 6.458 16 C -0.582 4.582 17 H 0.091 0.909 18 C -0.132 4.132 19 N -0.396 5.396 20 Si 0.731 3.269 21 H -0.205 1.205 22 H -0.192 1.192 23 H -0.192 1.192 24 C -0.014 4.014 25 C -0.030 4.030 26 C -0.135 4.135 27 H 0.102 0.898 28 H 0.096 0.904 29 H 0.098 0.902 30 H 0.168 0.832 31 H 0.089 0.911 32 H 0.158 0.842 33 H 0.114 0.886 34 H 0.059 0.941 35 H 0.080 0.920 36 H 0.065 0.935 37 H 0.124 0.876 38 H 0.093 0.907 39 H 0.112 0.888 40 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -19.454 6.815 8.771 22.402 hybrid contribution -0.183 -0.618 -0.204 0.676 sum -19.637 6.197 8.567 22.302 Atomic orbital electron populations 1.20867 0.88774 1.04089 1.03555 1.20335 0.97501 0.91713 0.94490 1.21907 0.92374 1.00053 1.01745 1.21819 0.89234 0.88854 0.99375 1.98441 1.76461 1.27814 1.96347 1.67002 1.39144 0.97340 1.12607 1.21172 0.91813 0.91042 0.98305 1.17766 0.81464 0.86391 0.79098 1.90775 1.69812 1.33983 1.47212 1.47994 1.13796 1.09974 1.59000 1.23448 0.99636 0.87306 0.96260 1.21545 0.95948 0.90551 0.93752 1.48214 1.17267 1.04352 1.68470 1.18266 0.78008 0.90819 0.76330 1.90591 1.63134 1.35426 1.56640 1.20930 1.04126 0.91745 1.41363 0.90945 1.25725 0.96691 0.97170 0.93613 1.69998 1.13686 1.27256 1.28629 0.86444 0.78647 0.82536 0.79223 1.20549 1.19190 1.19235 1.21887 0.97575 0.90359 0.91576 1.22360 0.96488 0.85282 0.98907 1.22053 0.93329 0.99936 0.98177 0.89820 0.90403 0.90250 0.83210 0.91052 0.84193 0.88649 0.94068 0.91976 0.93494 0.87564 0.90671 0.88824 0.82800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.51 10.06 36.00 0.36 -0.14 16 2 C -0.03 -0.25 5.91 -104.36 -0.62 -0.87 16 3 C -0.14 -1.13 9.59 -39.28 -0.38 -1.51 16 4 C 0.17 1.87 7.27 -17.46 -0.13 1.75 16 5 Cl -0.02 -0.20 29.10 -51.86 -1.51 -1.71 16 6 N -0.45 -5.89 6.39 -6.94 -0.04 -5.94 16 7 C 0.11 1.53 6.45 -83.01 -0.54 0.99 16 8 C 0.57 9.06 7.57 -12.19 -0.09 8.97 16 9 O -0.54 -9.49 16.05 5.35 0.09 -9.40 16 10 N -0.58 -9.69 2.95 -173.21 -0.51 -10.20 16 11 C 0.06 0.97 6.30 -3.60 -0.02 0.95 16 12 C 0.11 2.14 6.60 -3.60 -0.02 2.11 16 13 N -0.64 -14.67 2.94 -173.88 -0.51 -15.18 16 14 C 0.56 15.77 7.61 -12.99 -0.10 15.67 16 15 O -0.58 -18.43 14.46 5.20 0.08 -18.36 16 16 C -0.55 -15.03 8.86 -35.63 -0.32 -15.34 16 17 H 0.07 1.80 5.69 -52.48 -0.30 1.50 16 18 C 0.09 2.42 5.50 -17.37 -0.10 2.32 16 19 N -0.77 -22.77 11.84 55.55 0.66 -22.11 16 20 Si 0.91 19.85 29.56 -169.99 -5.02 14.82 16 21 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 22 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 23 H -0.27 -5.69 7.11 56.52 0.40 -5.28 16 24 C 0.11 2.09 6.50 -3.37 -0.02 2.07 16 25 C 0.09 1.55 6.59 -3.37 -0.02 1.53 16 26 C -0.11 -1.18 9.33 -39.05 -0.36 -1.54 16 27 H 0.08 0.29 8.14 -51.93 -0.42 -0.13 16 28 H 0.08 0.24 8.10 -51.93 -0.42 -0.18 16 29 H 0.08 0.31 8.10 -51.93 -0.42 -0.12 16 30 H 0.15 0.78 8.06 -52.49 -0.42 0.36 16 31 H 0.07 1.31 8.14 -51.93 -0.42 0.88 16 32 H 0.14 2.21 3.78 -84.05 -0.32 1.89 16 33 H 0.10 2.10 6.99 -51.93 -0.36 1.74 16 34 H 0.04 0.77 8.14 -51.93 -0.42 0.35 16 35 H 0.27 7.28 8.29 -40.82 -0.34 6.94 16 36 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 37 H 0.11 2.02 5.37 -51.93 -0.28 1.74 16 38 H 0.07 1.28 8.14 -51.92 -0.42 0.86 16 39 H 0.09 1.46 7.03 -51.93 -0.36 1.09 16 40 H 0.15 1.43 7.86 -52.49 -0.41 1.02 16 LS Contribution 348.73 15.07 5.26 5.26 Total: -1.00 -35.27 348.73 -8.42 -43.69 By element: Atomic # 1 Polarization: 6.71 SS G_CDS: -4.55 Total: 2.17 kcal Atomic # 6 Polarization: 19.30 SS G_CDS: -2.35 Total: 16.95 kcal Atomic # 7 Polarization: -53.02 SS G_CDS: -0.41 Total: -53.42 kcal Atomic # 8 Polarization: -27.92 SS G_CDS: 0.16 Total: -27.76 kcal Atomic # 14 Polarization: 19.85 SS G_CDS: -5.02 Total: 14.82 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.51 Total: -1.71 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -35.27 -8.42 -43.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000934787379.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.857 kcal (2) G-P(sol) polarization free energy of solvation -35.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds