Wall clock time and date at job start Tue Mar 31 2020 20:25:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31000 * 1 3 3 C 1.50709 * 119.99839 * 2 1 4 4 H 1.09005 * 115.55755 * 25.68955 * 3 2 1 5 5 C 1.52998 * 117.50013 * 171.38120 * 3 2 1 6 6 C 1.52991 * 59.99992 * 107.48767 * 5 3 2 7 7 N 1.46501 * 117.49847 * 107.48901 * 6 5 3 8 8 C 1.38538 * 120.00053 * 66.30896 * 7 6 5 9 9 C 1.40043 * 120.44724 * 4.40069 * 8 7 6 10 10 C 1.38803 * 118.58904 * 179.97438 * 9 8 7 11 11 Cl 1.73599 * 120.33574 * 179.97438 * 10 9 8 12 12 N 1.32207 * 119.32995 * 359.72930 * 10 9 8 13 13 C 1.33424 * 120.85466 * 0.54675 * 12 10 9 14 14 C 1.41574 * 119.23230 * 179.71824 * 13 12 10 15 15 H 1.08003 * 119.99888 * 185.23731 * 14 13 12 16 16 C 1.40053 * 120.00326 * 5.22542 * 14 13 12 17 17 N 1.30692 * 120.00082 * 173.73906 * 16 14 13 18 18 Si 1.86800 * 119.99999 * 353.74333 * 16 14 13 19 19 H 1.48498 * 109.47480 * 179.97438 * 18 16 14 20 20 H 1.48500 * 109.47227 * 300.00092 * 18 16 14 21 21 H 1.48501 * 109.47102 * 59.99685 * 18 16 14 22 22 N 1.32566 * 120.45090 * 184.37984 * 8 7 6 23 23 C 1.50703 * 117.50376 * 252.48427 * 6 5 3 24 24 O 1.20825 * 119.99492 * 71.51987 * 23 6 5 25 25 O 1.34225 * 120.00276 * 251.52699 * 23 6 5 26 26 C 1.45199 * 117.00108 * 174.36615 * 25 23 6 27 27 C 1.53001 * 109.46954 * 181.12600 * 26 25 23 28 28 H 1.07998 * 119.99856 * 359.97438 * 1 2 3 29 29 H 1.07994 * 119.99597 * 180.02562 * 1 2 3 30 30 H 1.07993 * 120.00523 * 180.02562 * 2 1 3 31 31 H 1.09007 * 117.49742 * 359.97438 * 5 3 2 32 32 H 1.08995 * 117.51569 * 214.97324 * 5 3 2 33 33 H 0.97002 * 120.00497 * 246.31397 * 7 6 5 34 34 H 1.08000 * 120.70493 * 359.97438 * 9 8 7 35 35 H 0.97001 * 119.99945 * 355.49330 * 17 16 14 36 36 H 1.09000 * 109.46579 * 301.12296 * 26 25 23 37 37 H 1.08998 * 109.47306 * 61.12583 * 26 25 23 38 38 H 1.08995 * 109.47165 * 304.34638 * 27 26 25 39 39 H 1.09003 * 109.47129 * 64.34520 * 27 26 25 40 40 H 1.08997 * 109.46633 * 184.34727 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3052 0.0000 4 1 1.5312 2.1555 0.4263 5 6 3.5788 1.2462 0.2034 6 6 3.0043 1.5777 -1.1753 7 7 3.1208 2.9616 -1.6417 8 6 4.3688 3.4984 -1.9129 9 6 5.5171 2.7007 -1.8333 10 6 6.7478 3.2781 -2.1136 11 17 8.2003 2.3314 -2.0281 12 7 6.8021 4.5552 -2.4512 13 6 5.6929 5.2941 -2.5144 14 6 5.7915 6.6599 -2.8738 15 1 4.9147 7.2900 -2.8469 16 6 7.0259 7.1940 -3.2641 17 7 7.0953 8.4197 -3.7124 18 14 8.5733 6.1545 -3.1439 19 1 9.7387 6.9451 -3.6151 20 1 8.7884 5.7484 -1.7318 21 1 8.4229 4.9433 -3.9898 22 7 4.4922 4.7741 -2.2519 23 6 3.1071 0.5208 -2.2446 24 8 2.4213 -0.4719 -2.1806 25 8 3.9606 0.6821 -3.2679 26 6 4.0994 -0.4293 -4.1920 27 6 5.1282 -0.0732 -5.2671 28 1 -0.5400 0.9353 0.0004 29 1 -0.5399 -0.9353 0.0004 30 1 1.8501 -0.9352 -0.0004 31 1 4.0306 0.2633 0.3376 32 1 4.0437 2.0575 0.7633 33 1 2.3242 3.5022 -1.7604 34 1 5.4465 1.6584 -1.5595 35 1 6.2843 8.9372 -3.8366 36 1 4.4326 -1.3137 -3.6490 37 1 3.1376 -0.6327 -4.6627 38 1 4.8342 0.8544 -5.7582 39 1 6.1071 0.0547 -4.8050 40 1 5.1760 -0.8750 -6.0038 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001170914073.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:25:24 Heat of formation + Delta-G solvation = -4.772689 kcal Electronic energy + Delta-G solvation = -27203.882539 eV Core-core repulsion = 23238.953342 eV Total energy + Delta-G solvation = -3964.929196 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -40.95560 -39.49551 -38.32777 -36.45089 -36.03763 -34.78390 -33.64535 -32.40588 -31.64094 -31.16508 -29.73145 -26.41664 -25.37582 -23.29189 -22.94295 -22.36644 -21.74868 -20.39186 -19.90090 -18.70683 -17.95907 -16.90721 -16.78832 -16.44610 -16.17343 -15.55768 -14.68839 -14.54561 -14.21576 -14.03251 -13.86480 -13.79457 -13.39861 -13.34024 -12.90681 -12.81915 -12.48717 -12.23219 -11.98767 -11.90898 -11.58686 -11.52378 -11.33854 -11.16005 -11.04464 -10.74992 -10.65498 -10.56019 -10.49203 -9.92955 -9.75370 -9.35798 -9.15304 -9.01480 -8.56174 -7.71922 -7.63507 -7.46409 -5.09503 1.80503 2.14695 2.22060 2.39940 2.51754 2.69918 3.25916 3.60131 3.60969 3.65297 3.99738 4.29624 4.38944 4.45263 4.49703 4.62101 4.87317 4.89528 4.94968 5.02212 5.20045 5.32324 5.44630 5.54983 5.61395 5.62890 5.70971 5.78597 5.93090 5.93335 6.03240 6.13318 6.41704 6.43335 6.52926 6.60858 6.62918 7.25185 7.33014 7.67586 7.78449 7.96746 8.04951 8.31078 8.53231 9.60770 9.85537 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.013934 B = 0.004168 C = 0.003737 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2009.057795 B = 6716.648195 C = 7491.756572 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.101 4.101 3 C -0.082 4.082 4 H 0.128 0.872 5 C -0.137 4.137 6 C 0.112 3.888 7 N -0.685 5.685 8 C 0.472 3.528 9 C -0.371 4.371 10 C 0.291 3.709 11 Cl -0.068 7.068 12 N -0.617 5.617 13 C 0.432 3.568 14 C -0.434 4.434 15 H 0.094 0.906 16 C 0.047 3.953 17 N -0.788 5.788 18 Si 1.151 2.849 19 H -0.331 1.331 20 H -0.287 1.287 21 H -0.281 1.281 22 N -0.626 5.626 23 C 0.492 3.508 24 O -0.502 6.502 25 O -0.330 6.330 26 C 0.062 3.938 27 C -0.153 4.153 28 H 0.094 0.906 29 H 0.099 0.901 30 H 0.117 0.883 31 H 0.111 0.889 32 H 0.121 0.879 33 H 0.408 0.592 34 H 0.120 0.880 35 H 0.287 0.713 36 H 0.067 0.933 37 H 0.066 0.934 38 H 0.068 0.932 39 H 0.070 0.930 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.022 -15.840 4.133 17.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.119 4.119 3 C -0.101 4.101 4 H 0.146 0.854 5 C -0.175 4.175 6 C 0.019 3.981 7 N -0.322 5.322 8 C 0.224 3.776 9 C -0.403 4.403 10 C 0.116 3.884 11 Cl -0.040 7.040 12 N -0.346 5.346 13 C 0.198 3.802 14 C -0.470 4.470 15 H 0.112 0.888 16 C -0.177 4.177 17 N -0.409 5.409 18 Si 0.986 3.014 19 H -0.265 1.265 20 H -0.215 1.215 21 H -0.209 1.209 22 N -0.355 5.355 23 C 0.333 3.667 24 O -0.390 6.390 25 O -0.245 6.245 26 C -0.011 4.011 27 C -0.210 4.210 28 H 0.113 0.887 29 H 0.118 0.882 30 H 0.135 0.865 31 H 0.129 0.871 32 H 0.139 0.861 33 H 0.246 0.754 34 H 0.138 0.862 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.084 0.916 38 H 0.087 0.913 39 H 0.089 0.911 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -5.424 -15.170 3.615 16.511 hybrid contribution -2.126 -0.841 0.143 2.291 sum -7.551 -16.010 3.758 18.096 Atomic orbital electron populations 1.23665 0.95668 1.01754 1.01827 1.22182 0.95507 0.95592 0.98663 1.21882 0.92875 0.99000 0.96356 0.85409 1.23611 0.95093 1.04670 0.94090 1.19793 1.09470 0.82211 0.86580 1.43189 1.06009 1.09101 1.73939 1.18088 0.84242 0.88859 0.86363 1.20802 0.90486 1.01241 1.27814 1.21142 0.85642 0.89581 0.92051 1.98324 1.39130 1.70207 1.96380 1.66400 1.32221 1.05928 1.30034 1.19440 0.80090 0.93204 0.87428 1.20564 0.98387 0.91723 1.36333 0.88813 1.27871 1.04784 0.96027 0.88999 1.70648 1.34337 1.08142 1.27770 0.81846 0.69384 0.71510 0.78701 1.26455 1.21480 1.20921 1.68222 1.27789 1.10461 1.29004 1.22894 0.76681 0.85884 0.81194 1.90647 1.42576 1.30559 1.75191 1.86733 1.58465 1.43529 1.35760 1.23038 1.00230 0.87698 0.90176 1.21789 0.99126 1.02851 0.97224 0.88743 0.88226 0.86492 0.87113 0.86086 0.75412 0.86187 0.90178 0.91437 0.91559 0.91315 0.91129 0.90480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.84 14.35 29.01 0.42 -1.43 16 2 C -0.10 -1.07 7.18 -36.02 -0.26 -1.33 16 3 C -0.08 -0.89 5.91 -91.77 -0.54 -1.43 16 4 H 0.13 1.22 8.14 -51.93 -0.42 0.80 16 5 C -0.14 -1.55 8.67 -26.74 -0.23 -1.78 16 6 C 0.11 1.52 1.75 -132.98 -0.23 1.29 16 7 N -0.69 -11.05 5.54 -48.65 -0.27 -11.32 16 8 C 0.47 9.67 7.48 -154.99 -1.16 8.51 16 9 C -0.37 -7.44 7.89 -38.70 -0.31 -7.75 16 10 C 0.29 6.47 7.33 -17.18 -0.13 6.35 16 11 Cl -0.07 -1.29 29.15 -51.86 -1.51 -2.80 16 12 N -0.62 -15.62 4.49 -9.83 -0.04 -15.67 16 13 C 0.43 11.32 7.26 -158.35 -1.15 10.17 16 14 C -0.43 -11.76 9.80 -37.63 -0.37 -12.13 16 15 H 0.09 2.57 8.06 -52.48 -0.42 2.15 16 16 C 0.05 1.26 5.52 -17.36 -0.10 1.16 16 17 N -0.79 -20.91 13.65 55.55 0.76 -20.15 16 18 Si 1.15 28.43 25.48 -169.99 -4.33 24.10 16 19 H -0.33 -8.05 7.11 56.52 0.40 -7.65 16 20 H -0.29 -7.11 7.06 56.52 0.40 -6.71 16 21 H -0.28 -6.99 6.77 56.52 0.38 -6.61 16 22 N -0.63 -15.13 10.39 -11.89 -0.12 -15.25 16 23 C 0.49 7.29 7.27 36.01 0.26 7.55 16 24 O -0.50 -7.55 13.52 -18.75 -0.25 -7.80 16 25 O -0.33 -5.13 8.32 -39.25 -0.33 -5.46 16 26 C 0.06 0.77 6.20 37.16 0.23 1.00 16 27 C -0.15 -1.71 10.29 37.16 0.38 -1.33 16 28 H 0.09 0.83 8.05 -52.49 -0.42 0.40 16 29 H 0.10 0.85 8.06 -52.49 -0.42 0.43 16 30 H 0.12 1.28 7.44 -52.49 -0.39 0.89 16 31 H 0.11 1.11 8.14 -51.93 -0.42 0.69 16 32 H 0.12 1.41 8.14 -51.93 -0.42 0.99 16 33 H 0.41 6.14 8.95 -40.82 -0.37 5.77 16 34 H 0.12 2.15 5.67 -52.49 -0.30 1.85 16 35 H 0.29 7.24 8.72 -40.82 -0.36 6.88 16 36 H 0.07 0.75 8.14 -51.93 -0.42 0.33 16 37 H 0.07 0.77 8.11 -51.93 -0.42 0.35 16 38 H 0.07 0.86 8.14 -51.93 -0.42 0.44 16 39 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 40 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 LS Contribution 358.43 15.07 5.40 5.40 Total: -1.00 -29.71 358.43 -8.75 -38.46 By element: Atomic # 1 Polarization: 6.52 SS G_CDS: -4.88 Total: 1.64 kcal Atomic # 6 Polarization: 12.03 SS G_CDS: -3.18 Total: 8.85 kcal Atomic # 7 Polarization: -62.71 SS G_CDS: 0.32 Total: -62.39 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -0.58 Total: -13.26 kcal Atomic # 14 Polarization: 28.43 SS G_CDS: -4.33 Total: 24.10 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.51 Total: -2.80 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -29.71 -8.75 -38.46 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001170914073.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.692 kcal (2) G-P(sol) polarization free energy of solvation -29.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds