Wall clock time and date at job start Tue Mar 31 2020 20:25:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30996 * 1 3 3 C 1.50700 * 120.00049 * 2 1 4 4 H 1.09002 * 115.54595 * 334.32960 * 3 2 1 5 5 C 1.53071 * 117.51732 * 188.60502 * 3 2 1 6 6 C 1.52998 * 59.98473 * 252.52260 * 5 3 2 7 7 N 1.46501 * 117.49693 * 252.49526 * 6 5 3 8 8 C 1.38544 * 119.99955 * 148.19801 * 7 6 5 9 9 C 1.40040 * 120.44393 * 3.91531 * 8 7 6 10 10 C 1.38808 * 118.58918 * 179.77786 * 9 8 7 11 11 Cl 1.73601 * 120.33860 * 180.24644 * 10 9 8 12 12 N 1.32209 * 119.32244 * 0.49588 * 10 9 8 13 13 C 1.33416 * 120.86023 * 359.74793 * 12 10 9 14 14 C 1.41575 * 119.23808 * 180.02562 * 13 12 10 15 15 H 1.08001 * 120.00605 * 179.97438 * 14 13 12 16 16 C 1.40062 * 119.99778 * 359.97438 * 14 13 12 17 17 N 1.30690 * 119.99942 * 0.02562 * 16 14 13 18 18 Si 1.86803 * 120.00019 * 180.02562 * 16 14 13 19 19 H 1.48505 * 109.46819 * 359.97438 * 18 16 14 20 20 H 1.48491 * 109.47003 * 119.99562 * 18 16 14 21 21 H 1.48498 * 109.46818 * 240.00150 * 18 16 14 22 22 N 1.32559 * 120.44779 * 184.19259 * 8 7 6 23 23 C 1.50696 * 117.50010 * 107.50290 * 6 5 3 24 24 O 1.20826 * 119.99881 * 321.48783 * 23 6 5 25 25 O 1.34224 * 120.00308 * 141.48317 * 23 6 5 26 26 C 1.45206 * 117.00203 * 174.95993 * 25 23 6 27 27 C 1.52999 * 109.47284 * 184.98780 * 26 25 23 28 28 H 1.07992 * 120.00355 * 359.97438 * 1 2 3 29 29 H 1.08002 * 119.99607 * 180.02562 * 1 2 3 30 30 H 1.07999 * 119.99963 * 179.97438 * 2 1 3 31 31 H 1.09002 * 117.51286 * 145.03724 * 5 3 2 32 32 H 1.09008 * 117.49161 * 0.02562 * 5 3 2 33 33 H 0.97004 * 120.00031 * 327.93072 * 7 6 5 34 34 H 1.07996 * 120.70679 * 0.02640 * 9 8 7 35 35 H 0.96993 * 119.99929 * 180.02562 * 17 16 14 36 36 H 1.08993 * 109.46895 * 304.98599 * 26 25 23 37 37 H 1.08995 * 109.47020 * 64.98784 * 26 25 23 38 38 H 1.09007 * 109.46943 * 304.99805 * 27 26 25 39 39 H 1.08998 * 109.47288 * 64.99130 * 27 26 25 40 40 H 1.08993 * 109.47343 * 184.99862 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 1 1.5309 2.1554 -0.4260 5 6 3.5795 1.2464 -0.2031 6 6 3.0043 1.5777 1.1754 7 7 3.1205 2.9615 1.6420 8 6 2.1436 3.4997 2.4639 9 6 1.0842 2.7059 2.9208 10 6 0.1294 3.2834 3.7463 11 17 -1.1994 2.3396 4.3440 12 7 0.2396 4.5608 4.0687 13 6 1.2565 5.2958 3.6153 14 6 1.3411 6.6605 3.9826 15 1 2.1593 7.2668 3.6230 16 6 0.3637 7.2242 4.8124 17 7 -0.6261 6.4904 5.2480 18 14 0.4749 9.0250 5.2965 19 1 1.6811 9.6305 4.6769 20 1 -0.7372 9.7405 4.8234 21 1 0.5698 9.1353 6.7743 22 7 2.1962 4.7743 2.8241 23 6 3.1066 0.5205 2.2444 24 8 2.9465 -0.6430 1.9608 25 8 3.3757 0.8714 3.5117 26 6 3.3484 -0.1845 4.5081 27 6 3.5540 0.4206 5.8983 28 1 -0.5400 0.9352 0.0004 29 1 -0.5399 -0.9354 0.0004 30 1 1.8500 -0.9353 0.0004 31 1 4.0443 2.0580 -0.7629 32 1 4.0316 0.2636 -0.3372 33 1 3.8833 3.4997 1.3787 34 1 1.0139 1.6654 2.6401 35 1 -1.3032 6.8809 5.8223 36 1 2.3852 -0.6931 4.4721 37 1 4.1448 -0.8994 4.3017 38 1 4.4749 1.0038 5.9081 39 1 2.7114 1.0680 6.1410 40 1 3.6224 -0.3788 6.6360 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001170914076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:25:27 Heat of formation + Delta-G solvation = 11.587868 kcal Electronic energy + Delta-G solvation = -27379.663772 eV Core-core repulsion = 23415.444023 eV Total energy + Delta-G solvation = -3964.219749 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.098 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.78714 -39.03586 -38.09623 -36.22865 -35.60411 -34.48184 -33.36814 -32.07459 -31.52468 -30.88832 -29.00812 -26.45576 -25.21792 -23.14997 -22.67926 -22.00849 -21.84826 -20.27329 -19.68968 -18.19273 -17.56825 -16.55055 -16.41361 -16.21564 -15.86387 -15.34191 -14.68355 -14.34615 -14.11834 -13.80896 -13.64652 -13.51937 -13.33247 -13.09866 -12.79568 -12.66866 -12.30784 -11.90123 -11.65016 -11.48086 -11.41625 -11.40688 -11.29301 -11.00879 -10.85218 -10.77756 -10.36999 -10.35278 -10.30924 -10.18529 -10.10878 -9.26753 -9.06138 -8.97397 -8.28441 -7.52033 -7.27744 -6.58559 -4.80955 1.93108 2.47142 2.52053 2.68697 2.94778 2.98528 3.05182 3.10754 3.12024 3.39719 3.85289 3.88531 4.51701 4.58989 4.66167 4.71565 5.04107 5.08410 5.12057 5.27123 5.34402 5.48327 5.51256 5.74746 5.83746 5.84493 5.90977 6.04622 6.11556 6.16597 6.28595 6.39809 6.60177 6.75819 6.79105 6.85146 6.87403 7.08406 7.55653 7.95375 8.05336 8.13909 8.48046 8.56927 9.01098 10.06520 10.21387 Molecular weight = 337.10amu Principal moments of inertia in cm(-1) A = 0.012800 B = 0.004063 C = 0.003982 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2187.006405 B = 6889.465726 C = 7029.839268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.125 4.125 3 C -0.087 4.087 4 H 0.127 0.873 5 C -0.132 4.132 6 C 0.115 3.885 7 N -0.688 5.688 8 C 0.462 3.538 9 C -0.384 4.384 10 C 0.268 3.732 11 Cl -0.083 7.083 12 N -0.524 5.524 13 C 0.435 3.565 14 C -0.394 4.394 15 H 0.096 0.904 16 C 0.066 3.934 17 N -0.702 5.702 18 Si 0.918 3.082 19 H -0.258 1.258 20 H -0.272 1.272 21 H -0.272 1.272 22 N -0.636 5.636 23 C 0.498 3.502 24 O -0.511 6.511 25 O -0.331 6.331 26 C 0.065 3.935 27 C -0.152 4.152 28 H 0.098 0.902 29 H 0.099 0.901 30 H 0.123 0.877 31 H 0.117 0.883 32 H 0.116 0.884 33 H 0.406 0.594 34 H 0.103 0.897 35 H 0.276 0.724 36 H 0.068 0.932 37 H 0.064 0.936 38 H 0.066 0.934 39 H 0.070 0.930 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.390 -9.807 -5.267 12.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C -0.143 4.143 3 C -0.106 4.106 4 H 0.144 0.856 5 C -0.170 4.170 6 C 0.022 3.978 7 N -0.325 5.325 8 C 0.216 3.784 9 C -0.416 4.416 10 C 0.087 3.913 11 Cl -0.055 7.055 12 N -0.246 5.246 13 C 0.199 3.801 14 C -0.430 4.430 15 H 0.114 0.886 16 C -0.162 4.162 17 N -0.323 5.323 18 Si 0.742 3.258 19 H -0.181 1.181 20 H -0.197 1.197 21 H -0.197 1.197 22 N -0.365 5.365 23 C 0.340 3.660 24 O -0.400 6.400 25 O -0.247 6.247 26 C -0.009 4.009 27 C -0.209 4.209 28 H 0.116 0.884 29 H 0.118 0.882 30 H 0.140 0.860 31 H 0.135 0.865 32 H 0.134 0.866 33 H 0.243 0.757 34 H 0.121 0.879 35 H 0.088 0.912 36 H 0.086 0.914 37 H 0.083 0.917 38 H 0.085 0.915 39 H 0.089 0.911 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 5.019 -9.330 -4.805 11.633 hybrid contribution -0.026 -0.285 0.215 0.358 sum 4.993 -9.615 -4.590 11.767 Atomic orbital electron populations 1.23816 0.95844 1.02022 0.99972 1.22347 0.95537 0.96123 1.00315 1.21938 0.92004 0.98889 0.97812 0.85563 1.23533 0.96494 1.04407 0.92547 1.19754 1.09260 0.82418 0.86321 1.43139 1.25614 1.09132 1.54625 1.17939 0.85433 0.88936 0.86095 1.20800 1.02851 1.00678 1.17321 1.21423 0.87113 0.91465 0.91264 1.98296 1.48581 1.70619 1.87990 1.68602 1.25434 1.02587 1.27936 1.19458 0.81921 0.93355 0.85397 1.19379 1.08109 0.91769 1.23696 0.88569 1.26121 0.94479 1.00542 0.95085 1.70153 1.06557 1.36062 1.19491 0.86092 0.79573 0.81194 0.78986 1.18127 1.19673 1.19676 1.68180 1.33211 1.10290 1.24807 1.22698 0.72042 0.88196 0.83021 1.90610 1.47034 1.19829 1.82544 1.86645 1.80046 1.40978 1.16994 1.22990 1.02007 0.88837 0.87081 1.21779 1.03807 1.01932 0.93391 0.88377 0.88234 0.85961 0.86501 0.86625 0.75718 0.87892 0.91229 0.91359 0.91727 0.91538 0.91092 0.90550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.32 14.35 29.02 0.42 -1.91 16 2 C -0.13 -1.66 7.82 -36.03 -0.28 -1.94 16 3 C -0.09 -1.16 5.88 -91.74 -0.54 -1.70 16 4 H 0.13 1.73 8.14 -51.93 -0.42 1.31 16 5 C -0.13 -1.45 9.73 -26.70 -0.26 -1.71 16 6 C 0.12 1.73 1.83 -132.97 -0.24 1.49 16 7 N -0.69 -11.98 5.40 -48.65 -0.26 -12.25 16 8 C 0.46 10.29 7.35 -154.99 -1.14 9.16 16 9 C -0.38 -8.70 8.31 -38.70 -0.32 -9.02 16 10 C 0.27 6.63 7.33 -17.18 -0.13 6.50 16 11 Cl -0.08 -1.78 29.15 -51.86 -1.51 -3.29 16 12 N -0.52 -14.42 7.86 -9.83 -0.08 -14.49 16 13 C 0.43 11.96 7.37 -158.35 -1.17 10.79 16 14 C -0.39 -10.44 9.37 -37.63 -0.35 -10.80 16 15 H 0.10 2.44 7.85 -52.49 -0.41 2.02 16 16 C 0.07 1.62 5.50 -17.35 -0.10 1.53 16 17 N -0.70 -18.22 11.42 55.55 0.63 -17.58 16 18 Si 0.92 18.07 29.56 -169.99 -5.02 13.04 16 19 H -0.26 -4.98 7.11 56.52 0.40 -4.58 16 20 H -0.27 -5.25 7.11 56.52 0.40 -4.85 16 21 H -0.27 -5.26 7.11 56.52 0.40 -4.86 16 22 N -0.64 -16.12 10.39 -11.89 -0.12 -16.24 16 23 C 0.50 8.25 5.83 36.00 0.21 8.46 16 24 O -0.51 -8.52 13.88 -18.75 -0.26 -8.78 16 25 O -0.33 -5.76 8.88 -39.24 -0.35 -6.11 16 26 C 0.06 0.92 6.21 37.16 0.23 1.15 16 27 C -0.15 -1.94 10.29 37.16 0.38 -1.56 16 28 H 0.10 1.33 8.05 -52.49 -0.42 0.90 16 29 H 0.10 1.12 8.06 -52.49 -0.42 0.70 16 30 H 0.12 1.60 7.06 -52.49 -0.37 1.23 16 31 H 0.12 1.02 8.14 -51.93 -0.42 0.60 16 32 H 0.12 1.14 8.12 -51.92 -0.42 0.72 16 33 H 0.41 6.38 8.95 -40.82 -0.37 6.01 16 34 H 0.10 2.22 5.98 -52.49 -0.31 1.91 16 35 H 0.28 6.47 8.29 -40.82 -0.34 6.13 16 36 H 0.07 0.98 8.09 -51.93 -0.42 0.56 16 37 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 38 H 0.07 0.85 8.14 -51.92 -0.42 0.42 16 39 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 40 H 0.08 0.75 8.14 -51.93 -0.42 0.33 16 LS Contribution 364.34 15.07 5.49 5.49 Total: -1.00 -30.62 364.34 -9.59 -40.21 By element: Atomic # 1 Polarization: 14.38 SS G_CDS: -4.82 Total: 9.56 kcal Atomic # 6 Polarization: 13.72 SS G_CDS: -3.29 Total: 10.44 kcal Atomic # 7 Polarization: -60.74 SS G_CDS: 0.17 Total: -60.57 kcal Atomic # 8 Polarization: -14.29 SS G_CDS: -0.61 Total: -14.89 kcal Atomic # 14 Polarization: 18.07 SS G_CDS: -5.02 Total: 13.04 kcal Atomic # 17 Polarization: -1.78 SS G_CDS: -1.51 Total: -3.29 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -30.62 -9.59 -40.21 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001170914076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.803 kcal (2) G-P(sol) polarization free energy of solvation -30.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.178 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.215 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds