Wall clock time and date at job start Tue Mar 31 2020 20:23:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42902 * 113.99539 * 2 1 4 4 C 1.53005 * 109.47002 * 180.02562 * 3 2 1 5 5 C 1.53006 * 109.46882 * 299.99943 * 4 3 2 6 6 N 1.46504 * 109.47239 * 180.02562 * 4 3 2 7 7 C 1.34777 * 119.99800 * 179.97438 * 6 4 3 8 8 O 1.21585 * 119.99914 * 359.97438 * 7 6 4 9 9 C 1.47534 * 119.99436 * 179.97438 * 7 6 4 10 10 C 1.39661 * 120.19959 * 359.97438 * 9 7 6 11 11 C 1.37833 * 119.91839 * 179.97438 * 10 9 7 12 12 C 1.38567 * 120.32258 * 0.02562 * 11 10 9 13 13 C 1.38029 * 120.40619 * 0.02562 * 12 11 10 14 14 C 1.38833 * 120.06664 * 359.95361 * 13 12 11 15 15 O 1.35524 * 120.15909 * 180.02562 * 14 13 12 16 16 C 1.34815 * 116.99762 * 354.40543 * 15 14 13 17 17 H 1.08001 * 120.00398 * 5.06019 * 16 15 14 18 18 C 1.38698 * 119.99875 * 185.06601 * 16 15 14 19 19 N 1.31529 * 119.99965 * 359.97438 * 18 16 15 20 20 Si 1.86798 * 120.00327 * 179.97438 * 18 16 15 21 21 H 1.48501 * 109.47221 * 89.99686 * 20 18 16 22 22 H 1.48498 * 109.47216 * 209.99658 * 20 18 16 23 23 H 1.48506 * 109.46604 * 329.99594 * 20 18 16 24 24 C 1.50699 * 109.47161 * 59.99837 * 4 3 2 25 25 O 1.20824 * 119.99649 * 265.00043 * 24 4 3 26 26 O 1.34222 * 120.00090 * 85.00356 * 24 4 3 27 27 C 1.45202 * 116.99958 * 179.97438 * 26 24 4 28 28 H 1.09000 * 109.47439 * 299.99496 * 1 2 3 29 29 H 1.09003 * 109.47741 * 60.00343 * 1 2 3 30 30 H 1.09005 * 109.47174 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47266 * 60.00290 * 3 2 1 32 32 H 1.09002 * 109.47519 * 299.99599 * 3 2 1 33 33 H 1.09000 * 109.47124 * 299.99952 * 5 4 3 34 34 H 1.09000 * 109.47047 * 59.99892 * 5 4 3 35 35 H 1.09000 * 109.47119 * 180.02562 * 5 4 3 36 36 H 0.96997 * 119.99877 * 359.97438 * 6 4 3 37 37 H 1.07999 * 120.04029 * 0.02562 * 10 9 7 38 38 H 1.07997 * 119.83568 * 180.29263 * 11 10 9 39 39 H 1.08002 * 119.80042 * 179.97438 * 12 11 10 40 40 H 1.07993 * 119.96591 * 179.97438 * 13 12 11 41 41 H 0.96992 * 120.00366 * 180.02562 * 19 18 16 42 42 H 1.08991 * 109.47208 * 60.00182 * 27 26 24 43 43 H 1.09005 * 109.46738 * 180.02562 * 27 26 24 44 44 H 1.09006 * 109.46844 * 299.99493 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 6 3.9873 0.4253 1.2483 6 7 4.1312 2.5232 0.0000 7 6 5.4716 2.6641 0.0001 8 8 6.1862 1.6804 0.0001 9 6 6.0715 4.0119 0.0001 10 6 5.2545 5.1446 -0.0005 11 6 5.8211 6.4010 0.0001 12 6 7.1991 6.5470 0.0008 13 6 8.0192 5.4368 0.0003 14 6 7.4661 4.1634 0.0002 15 8 8.2695 3.0721 0.0002 16 6 9.5951 3.2880 -0.1167 17 1 9.9794 4.2973 -0.1226 18 6 10.4654 2.2140 -0.2294 19 7 9.9975 0.9847 -0.2218 20 14 12.3021 2.5130 -0.3921 21 1 12.9189 2.5515 0.9582 22 1 12.9139 1.4164 -1.1847 23 1 12.5335 3.8091 -1.0792 24 6 3.9796 0.4372 -1.2314 25 8 4.1735 -0.7542 -1.1773 26 8 4.1598 1.0947 -2.3875 27 6 4.5889 0.3107 -3.5319 28 1 -0.3634 0.5137 0.8900 29 1 -0.3635 0.5138 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 1.6885 1.8464 0.8900 32 1 1.6885 1.8465 -0.8900 33 1 3.6660 0.9661 2.1385 34 1 3.5440 -0.5705 1.2483 35 1 5.0740 0.3397 1.2482 36 1 3.5610 3.3079 0.0003 37 1 4.1799 5.0361 -0.0006 38 1 5.1880 7.2760 0.0044 39 1 7.6341 7.5356 0.0008 40 1 9.0922 5.5588 0.0004 41 1 10.6061 0.2336 -0.3003 42 1 3.8461 -0.4579 -3.7448 43 1 4.6969 0.9624 -4.3989 44 1 5.5466 -0.1608 -3.3107 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000268273240.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:23:46 Heat of formation + Delta-G solvation = -146.777999 kcal Electronic energy + Delta-G solvation = -30548.115358 eV Core-core repulsion = 26239.859528 eV Total energy + Delta-G solvation = -4308.255830 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -40.71381 -39.44299 -38.41349 -37.84871 -36.37851 -36.11366 -34.91398 -32.35416 -31.62995 -29.68802 -28.93357 -27.69909 -27.51749 -25.92518 -25.38372 -23.65009 -23.03886 -21.54817 -20.38371 -19.50317 -18.15832 -17.81856 -17.52905 -16.63892 -16.50398 -16.35431 -15.88477 -15.69448 -15.21854 -14.73269 -14.52675 -14.25136 -14.17414 -13.94314 -13.68435 -13.63677 -13.21172 -13.03453 -12.79969 -12.52819 -12.36815 -12.03111 -11.86536 -11.75427 -11.72832 -11.68077 -11.33639 -11.22904 -11.11763 -10.91573 -10.80862 -10.46860 -10.40566 -10.22040 -9.94015 -9.58186 -8.89568 -8.88434 -8.77901 -8.30417 -7.33154 -6.44896 -4.05232 1.67586 2.30236 2.54998 2.87914 3.07130 3.11406 3.12586 3.17437 3.69851 3.92700 3.95585 4.53979 4.59164 4.71212 4.95253 5.04904 5.07218 5.09438 5.15900 5.22436 5.36913 5.37625 5.42886 5.46925 5.49444 5.52165 5.71020 5.81560 5.92549 6.03513 6.08696 6.10681 6.53425 6.59502 6.65141 6.69875 6.73874 6.84646 6.89272 7.03799 7.21446 7.27438 7.67120 7.87529 7.98292 8.14496 8.93387 8.98438 9.65616 10.68400 Molecular weight = 337.14amu Principal moments of inertia in cm(-1) A = 0.012318 B = 0.004013 C = 0.003362 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2272.559385 B = 6975.203112 C = 8326.348348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.376 6.376 3 C 0.062 3.938 4 C 0.201 3.799 5 C -0.152 4.152 6 N -0.730 5.730 7 C 0.562 3.438 8 O -0.489 6.489 9 C -0.225 4.225 10 C -0.036 4.036 11 C -0.231 4.231 12 C -0.050 4.050 13 C -0.237 4.237 14 C 0.190 3.810 15 O -0.122 6.122 16 C -0.404 4.404 17 H 0.094 0.906 18 C 0.045 3.955 19 N -0.830 5.830 20 Si 0.940 3.060 21 H -0.272 1.272 22 H -0.276 1.276 23 H -0.266 1.266 24 C 0.473 3.527 25 O -0.492 6.492 26 O -0.353 6.353 27 C 0.038 3.962 28 H 0.044 0.956 29 H 0.042 0.958 30 H 0.089 0.911 31 H 0.075 0.925 32 H 0.065 0.935 33 H 0.067 0.933 34 H 0.080 0.920 35 H 0.091 0.909 36 H 0.397 0.603 37 H 0.112 0.888 38 H 0.109 0.891 39 H 0.110 0.890 40 H 0.132 0.868 41 H 0.272 0.728 42 H 0.057 0.943 43 H 0.097 0.903 44 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.578 5.026 -1.112 17.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.294 6.294 3 C -0.015 4.015 4 C 0.113 3.887 5 C -0.210 4.210 6 N -0.390 5.390 7 C 0.352 3.648 8 O -0.361 6.361 9 C -0.230 4.230 10 C -0.055 4.055 11 C -0.250 4.250 12 C -0.068 4.068 13 C -0.256 4.256 14 C 0.130 3.870 15 O -0.020 6.020 16 C -0.480 4.480 17 H 0.112 0.888 18 C -0.163 4.163 19 N -0.461 5.461 20 Si 0.764 3.236 21 H -0.197 1.197 22 H -0.201 1.201 23 H -0.191 1.191 24 C 0.313 3.687 25 O -0.376 6.376 26 O -0.270 6.270 27 C -0.056 4.056 28 H 0.063 0.937 29 H 0.061 0.939 30 H 0.107 0.893 31 H 0.093 0.907 32 H 0.083 0.917 33 H 0.086 0.914 34 H 0.099 0.901 35 H 0.109 0.891 36 H 0.233 0.767 37 H 0.130 0.870 38 H 0.128 0.872 39 H 0.128 0.872 40 H 0.149 0.851 41 H 0.082 0.918 42 H 0.076 0.924 43 H 0.115 0.885 44 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -15.765 3.167 -1.140 16.121 hybrid contribution 0.471 0.818 -0.284 0.986 sum -15.294 3.985 -1.424 15.869 Atomic orbital electron populations 1.22791 0.80411 1.03157 1.00095 1.87984 1.20022 1.25974 1.95442 1.22581 0.90460 0.86279 1.02192 1.19856 0.92192 0.84541 0.92140 1.22108 1.05324 1.00344 0.93226 1.45849 1.07524 1.05794 1.79835 1.18235 0.80498 0.89863 0.76175 1.90958 1.59706 1.39207 1.46277 1.18692 0.91130 0.91991 1.21194 1.20744 0.97480 0.91815 0.95471 1.20450 0.94759 0.96232 1.13549 1.20902 0.93508 0.97450 0.94975 1.21155 1.00790 0.91802 1.11894 1.19248 0.89561 0.87457 0.90731 1.84169 1.17752 1.26826 1.73268 1.21492 0.78865 0.94780 1.52842 0.88847 1.25390 1.00408 0.94345 0.96154 1.70129 1.35767 0.98078 1.42088 0.85737 0.80474 0.78583 0.78775 1.19722 1.20133 1.19054 1.23594 0.73818 0.86796 0.84443 1.90622 1.45936 1.16256 1.84824 1.86480 1.78575 1.42684 1.19223 1.23199 1.00431 0.96153 0.85808 0.93717 0.93938 0.89253 0.90733 0.91702 0.91415 0.90086 0.89067 0.76683 0.87032 0.87242 0.87182 0.85068 0.91808 0.92448 0.88489 0.91601 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.26 11.01 101.05 1.11 1.37 16 2 O -0.38 -4.75 9.65 -35.23 -0.34 -5.09 16 3 C 0.06 0.72 4.91 37.16 0.18 0.90 16 4 C 0.20 3.24 0.86 -132.96 -0.11 3.13 16 5 C -0.15 -2.60 7.79 37.16 0.29 -2.31 16 6 N -0.73 -11.68 4.83 -49.71 -0.24 -11.92 16 7 C 0.56 12.09 7.09 -12.47 -0.09 12.00 16 8 O -0.49 -13.12 12.37 -16.56 -0.20 -13.33 16 9 C -0.23 -4.76 5.89 -104.81 -0.62 -5.37 16 10 C -0.04 -0.59 9.54 -39.20 -0.37 -0.97 16 11 C -0.23 -3.62 10.02 -39.61 -0.40 -4.02 16 12 C -0.05 -0.85 10.03 -39.54 -0.40 -1.25 16 13 C -0.24 -4.99 9.16 -39.44 -0.36 -5.35 16 14 C 0.19 4.63 6.66 -38.60 -0.26 4.37 16 15 O -0.12 -3.57 7.84 -21.07 -0.17 -3.73 16 16 C -0.40 -11.35 9.49 30.90 0.29 -11.06 16 17 H 0.09 2.38 5.21 -52.49 -0.27 2.10 16 18 C 0.05 1.26 5.49 -17.51 -0.10 1.16 16 19 N -0.83 -25.10 13.67 55.48 0.76 -24.34 16 20 Si 0.94 20.53 29.55 -169.99 -5.02 15.50 16 21 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 22 H -0.28 -5.94 7.11 56.52 0.40 -5.53 16 23 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 24 C 0.47 9.22 5.07 36.01 0.18 9.40 16 25 O -0.49 -10.83 15.84 -18.75 -0.30 -11.13 16 26 O -0.35 -6.52 10.17 -39.24 -0.40 -6.92 16 27 C 0.04 0.59 10.56 101.05 1.07 1.66 16 28 H 0.04 0.29 8.14 -51.93 -0.42 -0.14 16 29 H 0.04 0.29 8.14 -51.93 -0.42 -0.13 16 30 H 0.09 0.64 8.14 -51.93 -0.42 0.21 16 31 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 32 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 33 H 0.07 0.96 8.14 -51.93 -0.42 0.54 16 34 H 0.08 1.36 7.41 -51.93 -0.38 0.98 16 35 H 0.09 1.95 6.16 -51.93 -0.32 1.63 16 36 H 0.40 4.75 6.50 -40.82 -0.27 4.48 16 37 H 0.11 1.34 6.40 -52.49 -0.34 1.01 16 38 H 0.11 1.37 8.06 -52.49 -0.42 0.95 16 39 H 0.11 1.53 8.06 -52.49 -0.42 1.11 16 40 H 0.13 2.73 5.64 -52.49 -0.30 2.44 16 41 H 0.27 7.55 8.31 -40.82 -0.34 7.21 16 42 H 0.06 0.79 8.13 -51.93 -0.42 0.37 16 43 H 0.10 1.20 8.14 -51.93 -0.42 0.77 16 44 H 0.07 1.16 8.13 -51.93 -0.42 0.74 16 LS Contribution 373.81 15.07 5.63 5.63 Total: -1.00 -37.46 373.81 -5.51 -42.97 By element: Atomic # 1 Polarization: 14.34 SS G_CDS: -5.66 Total: 8.68 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: 0.43 Total: 3.67 kcal Atomic # 7 Polarization: -36.78 SS G_CDS: 0.52 Total: -36.26 kcal Atomic # 8 Polarization: -38.79 SS G_CDS: -1.41 Total: -40.20 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -5.02 Total: 15.50 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -37.46 -5.51 -42.97 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000268273240.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.803 kcal (2) G-P(sol) polarization free energy of solvation -37.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.266 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds