Wall clock time and date at job start Tue Mar 31 2020 20:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38514 * 120.86370 * 2 1 4 4 Cl 1.73600 * 120.35911 * 0.02562 * 3 2 1 5 5 C 1.38428 * 119.27955 * 180.27400 * 3 2 1 6 6 N 1.31939 * 121.05993 * 359.70329 * 5 3 2 7 7 C 1.31659 * 121.89868 * 0.02562 * 6 5 3 8 8 C 1.39563 * 120.59269 * 0.02562 * 7 6 5 9 9 C 1.47851 * 120.55442 * 179.97438 * 8 7 6 10 10 O 1.21554 * 119.99732 * 230.84372 * 9 8 7 11 11 N 1.34774 * 119.99799 * 50.84140 * 9 8 7 12 12 C 1.46920 * 120.63487 * 5.39739 * 11 9 8 13 13 C 1.53187 * 108.77849 * 126.39009 * 12 11 9 14 14 C 1.53043 * 109.30829 * 54.63595 * 13 12 11 15 15 C 1.53041 * 109.53862 * 298.63440 * 14 13 12 16 16 H 1.08993 * 109.49813 * 301.38164 * 15 14 13 17 17 N 1.46507 * 109.49567 * 181.31758 * 15 14 13 18 18 C 1.46498 * 119.99775 * 299.72509 * 17 15 14 19 19 C 1.36934 * 119.99825 * 120.00461 * 17 15 14 20 20 H 1.07996 * 119.99950 * 336.72999 * 19 17 15 21 21 C 1.38813 * 120.00139 * 156.73756 * 19 17 15 22 22 N 1.31624 * 119.99855 * 345.05520 * 21 19 17 23 23 Si 1.86794 * 120.00177 * 165.05432 * 21 19 17 24 24 H 1.48510 * 109.46983 * 84.99207 * 23 21 19 25 25 H 1.48495 * 109.47156 * 204.98850 * 23 21 19 26 26 H 1.48493 * 109.47226 * 324.99399 * 23 21 19 27 27 C 1.46932 * 120.62474 * 185.40117 * 11 9 8 28 28 H 1.09001 * 109.47092 * 269.72061 * 1 2 3 29 29 H 1.09004 * 109.47431 * 29.72144 * 1 2 3 30 30 H 1.09006 * 109.47329 * 149.71825 * 1 2 3 31 31 H 1.08002 * 119.46676 * 179.72834 * 5 3 2 32 32 H 1.08001 * 119.70792 * 179.97438 * 7 6 5 33 33 H 1.09006 * 109.58372 * 6.60373 * 12 11 9 34 34 H 1.09004 * 109.58886 * 246.18408 * 12 11 9 35 35 H 1.08997 * 109.49991 * 294.68911 * 13 12 11 36 36 H 1.08997 * 109.49892 * 174.58641 * 13 12 11 37 37 H 1.09004 * 109.46102 * 178.61581 * 14 13 12 38 38 H 1.09000 * 109.46323 * 58.65775 * 14 13 12 39 39 H 1.09001 * 109.47474 * 267.10450 * 18 17 15 40 40 H 1.08999 * 109.47228 * 27.11109 * 18 17 15 41 41 H 1.08998 * 109.46897 * 147.10828 * 18 17 15 42 42 H 0.97000 * 120.00360 * 180.02562 * 22 21 19 43 43 H 1.09002 * 109.58183 * 113.82110 * 27 11 9 44 44 H 1.08991 * 109.58723 * 353.39239 * 27 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2175 1.1890 0.0000 4 17 1.3818 2.7106 0.0007 5 6 3.6012 1.1507 -0.0058 6 7 4.2505 0.0021 -0.0054 7 6 3.6197 -1.1535 -0.0001 8 6 2.2249 -1.2015 0.0049 9 6 1.5175 -2.4997 0.0103 10 8 0.6402 -2.7171 -0.8025 11 7 1.8454 -3.4420 0.9164 12 6 2.8190 -3.1531 1.9781 13 6 2.1865 -3.4896 3.3320 14 6 1.6888 -4.9368 3.3124 15 6 0.6212 -5.0962 2.2275 16 1 -0.2030 -4.4108 2.4247 17 7 0.1230 -6.4739 2.2306 18 6 1.0431 -7.5861 1.9802 19 6 -1.2038 -6.7216 2.4617 20 1 -1.8026 -5.9997 2.9970 21 6 -1.7790 -7.9007 2.0081 22 7 -1.1518 -8.6386 1.1166 23 14 -3.4432 -8.4403 2.6627 24 1 -4.5201 -7.7809 1.8809 25 1 -3.5709 -9.9143 2.5356 26 1 -3.5618 -8.0545 4.0917 27 6 1.2360 -4.7779 0.8610 28 1 -0.3633 -0.0050 1.0277 29 1 -0.3634 0.8925 -0.5095 30 1 -0.3634 -0.8875 -0.5182 31 1 4.1583 2.0760 -0.0102 32 1 4.1867 -2.0728 -0.0004 33 1 3.0855 -2.0965 1.9518 34 1 3.7117 -3.7609 1.8305 35 1 1.3477 -2.8190 3.5185 36 1 2.9298 -3.3712 4.1204 37 1 1.2603 -5.1866 4.2830 38 1 2.5236 -5.6051 3.1014 39 1 1.0399 -7.8283 0.9175 40 1 2.0499 -7.3003 2.2848 41 1 0.7241 -8.4573 2.5523 42 1 -1.5538 -9.4623 0.7993 43 1 1.9997 -5.5182 0.6224 44 1 0.4581 -4.7933 0.0978 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001027450505.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:10:38 Heat of formation + Delta-G solvation = 21.059792 kcal Electronic energy + Delta-G solvation = -27479.337867 eV Core-core repulsion = 23651.361946 eV Total energy + Delta-G solvation = -3827.975921 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.17243 -39.48310 -37.52541 -37.03574 -35.19378 -34.11542 -32.65989 -31.58453 -31.23259 -28.92690 -28.18192 -26.04137 -25.76589 -24.15071 -23.56827 -22.57395 -21.75420 -20.07493 -18.83293 -17.78528 -17.19806 -16.79454 -16.73642 -16.06522 -15.28326 -15.25400 -14.78770 -14.55951 -14.22657 -14.05950 -13.70161 -13.50115 -13.31749 -13.14761 -13.04199 -12.67768 -12.60881 -12.44462 -12.34509 -12.10660 -11.94363 -11.52054 -11.22133 -11.09410 -10.83648 -10.67265 -10.46319 -10.43637 -10.36679 -10.22242 -9.88135 -9.82087 -9.77342 -9.58560 -9.27577 -8.62243 -8.42137 -6.78822 -5.76248 -3.21809 0.32783 0.64177 1.60543 2.60977 2.97039 3.29257 3.37819 3.44055 3.45680 3.95523 4.19827 4.23377 4.29980 4.46934 4.78926 4.83272 4.90301 5.06096 5.17127 5.23677 5.36888 5.39341 5.41364 5.45580 5.50710 5.67710 5.74752 5.84403 5.90008 5.93852 6.05749 6.11132 6.17488 6.31298 6.43621 6.57502 6.71641 6.86927 6.91665 7.31798 7.35896 7.48098 7.66290 7.78692 8.15966 8.36950 9.19700 9.82512 10.31239 11.28813 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.018812 B = 0.002903 C = 0.002712 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1488.085126 B = 9643.201167 C =10321.053719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.018 3.982 3 C -0.100 4.100 4 Cl -0.047 7.047 5 C 0.130 3.870 6 N -0.474 5.474 7 C 0.138 3.862 8 C -0.164 4.164 9 C 0.561 3.439 10 O -0.524 6.524 11 N -0.595 5.595 12 C 0.103 3.897 13 C -0.130 4.130 14 C -0.134 4.134 15 C 0.169 3.831 16 H 0.065 0.935 17 N -0.589 5.589 18 C 0.159 3.841 19 C -0.259 4.259 20 H 0.068 0.932 21 C 0.005 3.995 22 N -0.903 5.903 23 Si 0.904 3.096 24 H -0.286 1.286 25 H -0.290 1.290 26 H -0.280 1.280 27 C 0.097 3.903 28 H 0.085 0.915 29 H 0.080 0.920 30 H 0.103 0.897 31 H 0.168 0.832 32 H 0.169 0.831 33 H 0.076 0.924 34 H 0.072 0.928 35 H 0.064 0.936 36 H 0.071 0.929 37 H 0.066 0.934 38 H 0.060 0.940 39 H 0.028 0.972 40 H 0.001 0.999 41 H 0.044 0.956 42 H 0.253 0.747 43 H 0.065 0.935 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.266 19.207 0.742 22.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C 0.009 3.991 3 C -0.129 4.129 4 Cl -0.019 7.019 5 C -0.027 4.027 6 N -0.182 5.182 7 C -0.020 4.020 8 C -0.169 4.169 9 C 0.347 3.653 10 O -0.401 6.401 11 N -0.328 5.328 12 C -0.020 4.020 13 C -0.169 4.169 14 C -0.173 4.173 15 C 0.059 3.941 16 H 0.083 0.917 17 N -0.311 5.311 18 C 0.015 3.985 19 C -0.388 4.388 20 H 0.086 0.914 21 C -0.194 4.194 22 N -0.548 5.548 23 Si 0.734 3.266 24 H -0.213 1.213 25 H -0.216 1.216 26 H -0.206 1.206 27 C -0.026 4.026 28 H 0.104 0.896 29 H 0.099 0.901 30 H 0.122 0.878 31 H 0.186 0.814 32 H 0.186 0.814 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.084 0.916 38 H 0.079 0.921 39 H 0.046 0.954 40 H 0.019 0.981 41 H 0.062 0.938 42 H 0.063 0.937 43 H 0.084 0.916 44 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 11.560 18.989 0.239 22.232 hybrid contribution -1.732 -0.241 0.259 1.768 sum 9.828 18.749 0.498 21.174 Atomic orbital electron populations 1.21194 0.88527 1.05891 1.04111 1.20266 0.97979 0.89807 0.91031 1.21894 0.93980 0.87943 1.09054 1.98379 1.78165 1.28472 1.96842 1.22931 0.89313 0.97332 0.93171 1.67866 1.39389 0.97738 1.13253 1.23128 0.90261 0.96786 0.91785 1.20964 0.95246 0.94386 1.06318 1.17946 0.82791 0.82916 0.81684 1.90796 1.30753 1.79415 1.39151 1.48272 1.42805 1.13618 1.28089 1.21902 0.91677 1.00880 0.87588 1.21890 1.00642 0.98656 0.95675 1.22097 0.99922 0.94174 1.01124 1.20635 0.94326 0.88373 0.90735 0.91677 1.43947 1.05749 0.98754 1.82647 1.20788 0.88278 0.89945 0.99507 1.19178 0.85841 1.04197 1.29617 0.91437 1.25023 0.97923 0.99348 0.97091 1.70067 1.38913 1.15682 1.30097 0.86293 0.83952 0.77627 0.78756 1.21285 1.21579 1.20604 1.22671 0.98137 0.79651 1.02106 0.89645 0.90101 0.87833 0.81442 0.81390 0.90551 0.90978 0.91759 0.91070 0.91565 0.92132 0.95369 0.98069 0.93752 0.93654 0.91638 0.88751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.61 9.30 36.00 0.33 -1.28 16 2 C 0.02 0.21 5.95 -103.88 -0.62 -0.41 16 3 C -0.10 -0.99 6.33 -39.41 -0.25 -1.24 16 4 Cl -0.05 -0.41 27.46 -51.86 -1.42 -1.83 16 5 C 0.13 1.19 10.97 -17.44 -0.19 1.00 16 6 N -0.47 -4.96 10.34 -12.88 -0.13 -5.09 16 7 C 0.14 1.47 8.82 -17.13 -0.15 1.32 16 8 C -0.16 -2.03 4.74 -104.82 -0.50 -2.53 16 9 C 0.56 8.64 6.74 -12.33 -0.08 8.55 16 10 O -0.52 -10.04 14.41 5.32 0.08 -9.96 16 11 N -0.60 -8.75 2.97 -173.88 -0.52 -9.27 16 12 C 0.10 1.15 5.41 -3.72 -0.02 1.13 16 13 C -0.13 -1.55 6.08 -26.61 -0.16 -1.71 16 14 C -0.13 -2.08 5.13 -26.69 -0.14 -2.22 16 15 C 0.17 3.28 2.74 -67.81 -0.19 3.10 16 16 H 0.06 1.36 7.87 -51.93 -0.41 0.95 16 17 N -0.59 -14.17 2.81 -173.35 -0.49 -14.66 16 18 C 0.16 3.74 7.92 59.85 0.47 4.21 16 19 C -0.26 -6.99 9.57 -15.06 -0.14 -7.13 16 20 H 0.07 1.79 7.84 -52.49 -0.41 1.38 16 21 C 0.01 0.14 5.04 -17.43 -0.09 0.05 16 22 N -0.90 -26.00 10.84 55.49 0.60 -25.40 16 23 Si 0.90 21.69 29.58 -169.99 -5.03 16.67 16 24 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 25 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 26 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 27 C 0.10 1.78 5.80 -3.71 -0.02 1.76 16 28 H 0.09 0.90 8.14 -51.93 -0.42 0.48 16 29 H 0.08 0.80 7.01 -51.93 -0.36 0.44 16 30 H 0.10 1.45 5.74 -51.93 -0.30 1.15 16 31 H 0.17 1.07 8.06 -52.49 -0.42 0.64 16 32 H 0.17 1.50 7.52 -52.49 -0.39 1.11 16 33 H 0.08 0.75 5.23 -51.93 -0.27 0.48 16 34 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 35 H 0.06 0.80 8.14 -51.93 -0.42 0.37 16 36 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 37 H 0.07 1.09 8.14 -51.93 -0.42 0.67 16 38 H 0.06 0.93 6.72 -51.93 -0.35 0.58 16 39 H 0.03 0.72 7.45 -51.93 -0.39 0.33 16 40 H 0.00 0.02 6.47 -51.93 -0.34 -0.32 16 41 H 0.04 1.13 7.26 -51.93 -0.38 0.75 16 42 H 0.25 7.10 8.31 -40.82 -0.34 6.76 16 43 H 0.07 1.19 7.50 -51.93 -0.39 0.80 16 44 H 0.09 2.06 6.99 -51.93 -0.36 1.69 16 LS Contribution 360.98 15.07 5.44 5.44 Total: -1.00 -30.68 360.98 -9.23 -39.92 By element: Atomic # 1 Polarization: 5.59 SS G_CDS: -6.02 Total: -0.43 kcal Atomic # 6 Polarization: 6.36 SS G_CDS: -1.74 Total: 4.62 kcal Atomic # 7 Polarization: -53.88 SS G_CDS: -0.54 Total: -54.42 kcal Atomic # 8 Polarization: -10.04 SS G_CDS: 0.08 Total: -9.96 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -5.03 Total: 16.67 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.42 Total: -1.83 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -30.68 -9.23 -39.92 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001027450505.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.976 kcal (2) G-P(sol) polarization free energy of solvation -30.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.916 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds