Wall clock time and date at job start Tue Mar 31 2020 20:09:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09000 * 109.70254 * 2 1 4 4 C 1.52757 * 109.43203 * 120.16474 * 2 1 3 5 5 C 1.53040 * 109.38442 * 65.42332 * 4 2 1 6 6 H 1.09005 * 109.45818 * 301.21694 * 5 4 2 7 7 N 1.46501 * 109.46004 * 181.26038 * 5 4 2 8 8 C 1.34783 * 119.99512 * 154.93035 * 7 5 4 9 9 O 1.21278 * 120.00294 * 0.02562 * 8 7 5 10 10 C 1.50700 * 119.99377 * 179.97438 * 8 7 5 11 11 C 1.50702 * 109.46825 * 179.97438 * 10 8 7 12 12 C 1.38650 * 120.79919 * 264.72135 * 11 10 8 13 13 C 1.38183 * 119.17737 * 179.72859 * 12 11 10 14 14 N 1.31888 * 120.79585 * 0.55791 * 13 12 11 15 15 C 1.31846 * 121.73434 * 359.72276 * 14 13 12 16 16 C 1.38349 * 120.74615 * 359.97438 * 15 14 13 17 17 Cl 1.73598 * 120.43095 * 179.97438 * 16 15 14 18 18 C 1.53033 * 109.53905 * 61.23998 * 5 4 2 19 19 C 1.53196 * 109.31225 * 298.63809 * 18 5 4 20 20 N 1.46919 * 108.77664 * 54.63354 * 19 18 5 21 21 C 1.36936 * 120.63174 * 126.37082 * 20 19 18 22 22 H 1.08000 * 120.00286 * 207.48504 * 21 20 19 23 23 C 1.38811 * 120.00078 * 27.48034 * 21 20 19 24 24 N 1.31618 * 120.00155 * 17.80597 * 23 21 20 25 25 Si 1.86802 * 120.00260 * 197.81148 * 23 21 20 26 26 H 1.48503 * 109.47046 * 265.36123 * 25 23 21 27 27 H 1.48505 * 109.46961 * 25.35479 * 25 23 21 28 28 H 1.48491 * 109.47320 * 145.35593 * 25 23 21 29 29 H 1.08999 * 109.47586 * 180.35635 * 1 2 3 30 30 H 1.09001 * 109.47267 * 300.36168 * 1 2 3 31 31 H 1.09002 * 109.46918 * 60.35292 * 1 2 3 32 32 H 1.09006 * 109.56752 * 305.38476 * 4 2 1 33 33 H 1.09003 * 109.38742 * 185.35283 * 4 2 1 34 34 H 0.96994 * 120.00089 * 334.93197 * 7 5 4 35 35 H 1.08996 * 109.47365 * 299.99891 * 10 8 7 36 36 H 1.09002 * 109.47491 * 60.00457 * 10 8 7 37 37 H 1.08004 * 120.40754 * 359.97438 * 12 11 10 38 38 H 1.08002 * 119.60229 * 180.27601 * 13 12 11 39 39 H 1.07996 * 119.62536 * 179.97438 * 15 14 13 40 40 H 1.09000 * 109.50328 * 178.68695 * 18 5 4 41 41 H 1.09006 * 109.52727 * 58.60014 * 18 5 4 42 42 H 1.08997 * 109.58462 * 294.84461 * 19 18 5 43 43 H 1.09002 * 109.58534 * 174.42317 * 19 18 5 44 44 H 0.96994 * 120.00105 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8974 1.0262 0.0000 4 6 2.0382 -0.7239 1.2455 5 6 1.6409 -2.2000 1.1726 6 1 0.5563 -2.2810 1.0996 7 7 2.1013 -2.8895 2.3805 8 6 1.4757 -4.0081 2.7977 9 8 0.5320 -4.4440 2.1731 10 6 1.9497 -4.7176 4.0398 11 6 1.0878 -5.9291 4.2861 12 6 0.0039 -5.8658 5.1483 13 6 -0.7672 -6.9955 5.3451 14 7 -0.4761 -8.1268 4.7329 15 6 0.5498 -8.2264 3.9107 16 6 1.3633 -7.1359 3.6596 17 17 2.7123 -7.2764 2.5760 18 6 2.2842 -2.8430 -0.0580 19 6 1.7740 -2.1420 -1.3210 20 7 2.0225 -0.6996 -1.1945 21 6 2.7051 -0.0211 -2.1685 22 1 3.2643 0.8679 -1.9166 23 6 2.6785 -0.4759 -3.4797 24 7 1.7470 -1.3228 -3.8638 25 14 3.9649 0.1137 -4.6992 26 1 3.4330 1.2748 -5.4571 27 1 5.1913 0.5203 -3.9672 28 1 4.2929 -0.9850 -5.6427 29 1 -0.3634 -1.0276 0.0064 30 1 -0.3634 0.5194 0.8867 31 1 -0.3633 0.5084 -0.8932 32 1 1.5987 -0.2723 2.1350 33 1 3.1240 -0.6413 1.2942 34 1 2.8563 -2.5411 2.8798 35 1 2.9858 -5.0292 3.9073 36 1 1.8795 -4.0429 4.8930 37 1 -0.2372 -4.9439 5.6566 38 1 -1.6158 -6.9527 6.0118 39 1 0.7573 -9.1698 3.4278 40 1 2.0199 -3.8998 -0.0966 41 1 3.3678 -2.7410 0.0020 42 1 0.7043 -2.3203 -1.4310 43 1 2.3024 -2.5288 -2.1924 44 1 1.7282 -1.6403 -4.7801 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000947721975.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:09:41 Heat of formation + Delta-G solvation = 7.183232 kcal Electronic energy + Delta-G solvation = -26997.323101 eV Core-core repulsion = 23168.745447 eV Total energy + Delta-G solvation = -3828.577654 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -40.73675 -39.60061 -37.79945 -36.83764 -34.56296 -34.06178 -32.55861 -31.31958 -30.91689 -29.84994 -28.48355 -26.84155 -24.37826 -23.83981 -23.13615 -21.96360 -21.60547 -20.29747 -18.46389 -17.39029 -17.17595 -17.02415 -16.60198 -16.27029 -15.72906 -14.93839 -14.75691 -14.46171 -14.26683 -13.89841 -13.75571 -13.68136 -13.20321 -13.08239 -12.91708 -12.57324 -12.44738 -12.24072 -12.21507 -11.87592 -11.43384 -11.42511 -11.08568 -10.94440 -10.79737 -10.61950 -10.35872 -10.21165 -10.16096 -9.98433 -9.86017 -9.72604 -9.67199 -9.33902 -9.18411 -8.74328 -8.41602 -6.70219 -5.79155 -3.20867 0.66700 0.80497 1.82175 2.70556 3.18505 3.36693 3.44383 3.46054 3.52418 4.11738 4.14076 4.31115 4.48092 4.61520 4.78982 4.92621 4.99135 5.19292 5.27625 5.29021 5.36783 5.39485 5.51774 5.58968 5.77294 5.78159 6.00699 6.05270 6.19871 6.24242 6.29675 6.40757 6.44912 6.56714 6.64270 6.78595 6.86505 6.93943 7.14580 7.38180 7.55122 7.63441 7.69973 7.79451 8.33732 8.44637 9.20609 9.84432 10.40748 11.29238 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.019029 B = 0.002757 C = 0.002576 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1471.109735 B =10152.816764 C =10865.062590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.170 3.830 3 H 0.065 0.935 4 C -0.132 4.132 5 C 0.150 3.850 6 H 0.085 0.915 7 N -0.723 5.723 8 C 0.515 3.485 9 O -0.529 6.529 10 C -0.113 4.113 11 C -0.009 4.009 12 C -0.150 4.150 13 C 0.101 3.899 14 N -0.473 5.473 15 C 0.114 3.886 16 C -0.075 4.075 17 Cl -0.047 7.047 18 C -0.146 4.146 19 C 0.174 3.826 20 N -0.585 5.585 21 C -0.254 4.254 22 H 0.065 0.935 23 C 0.004 3.996 24 N -0.899 5.899 25 Si 0.900 3.100 26 H -0.288 1.288 27 H -0.279 1.279 28 H -0.290 1.290 29 H 0.049 0.951 30 H 0.036 0.964 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.062 0.938 34 H 0.395 0.605 35 H 0.110 0.890 36 H 0.109 0.891 37 H 0.143 0.857 38 H 0.163 0.837 39 H 0.165 0.835 40 H 0.052 0.948 41 H 0.054 0.946 42 H 0.021 0.979 43 H 0.089 0.911 44 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.599 -8.532 20.964 22.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C 0.062 3.938 3 H 0.083 0.917 4 C -0.172 4.172 5 C 0.047 3.953 6 H 0.103 0.897 7 N -0.374 5.374 8 C 0.300 3.700 9 O -0.405 6.405 10 C -0.153 4.153 11 C -0.018 4.018 12 C -0.170 4.170 13 C -0.055 4.055 14 N -0.181 5.181 15 C -0.044 4.044 16 C -0.104 4.104 17 Cl -0.019 7.019 18 C -0.187 4.187 19 C 0.048 3.952 20 N -0.306 5.306 21 C -0.383 4.383 22 H 0.083 0.917 23 C -0.195 4.195 24 N -0.543 5.543 25 Si 0.730 3.270 26 H -0.215 1.215 27 H -0.205 1.205 28 H -0.216 1.216 29 H 0.068 0.932 30 H 0.055 0.945 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.081 0.919 34 H 0.228 0.772 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.161 0.839 38 H 0.180 0.820 39 H 0.182 0.818 40 H 0.071 0.929 41 H 0.073 0.927 42 H 0.039 0.961 43 H 0.107 0.893 44 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -0.514 -9.653 20.361 22.539 hybrid contribution 1.629 1.171 -0.742 2.139 sum 1.115 -8.481 19.619 21.403 Atomic orbital electron populations 1.22312 0.98750 1.01079 1.00071 1.20341 0.91797 0.95122 0.86543 0.91673 1.22229 1.01188 0.94173 0.99607 1.21110 0.99793 0.91307 0.83044 0.89692 1.46298 1.34853 1.27077 1.29127 1.20107 0.83342 0.81021 0.85547 1.90755 1.27907 1.64970 1.56867 1.20798 1.00776 0.95033 0.98704 1.19617 0.95257 0.92929 0.93983 1.22033 0.94887 1.00724 0.99313 1.22831 0.98251 0.87823 0.96604 1.67804 1.15797 1.27227 1.07319 1.22757 0.89535 0.97652 0.94426 1.21987 0.94566 0.96358 0.97531 1.98398 1.43070 1.98007 1.62388 1.22559 1.00082 0.99172 0.96863 1.20736 0.97744 0.82873 0.93862 1.44153 1.63887 1.03383 1.19213 1.19148 1.22332 1.09947 0.86887 0.91680 1.25029 0.97750 1.00001 0.96752 1.70040 1.31761 1.35600 1.16903 0.86325 0.81703 0.77835 0.81169 1.21496 1.20469 1.21596 0.93235 0.94535 0.92609 0.92601 0.91900 0.77202 0.87174 0.87231 0.83928 0.81988 0.81831 0.92937 0.92730 0.96114 0.89329 0.93619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.08 9.02 37.16 0.34 -2.75 16 2 C 0.17 3.37 3.27 -67.83 -0.22 3.15 16 3 H 0.07 1.28 7.93 -51.93 -0.41 0.87 16 4 C -0.13 -2.11 4.99 -26.84 -0.13 -2.24 16 5 C 0.15 2.51 2.21 -67.89 -0.15 2.36 16 6 H 0.09 1.62 5.93 -51.93 -0.31 1.31 16 7 N -0.72 -9.36 5.08 -53.77 -0.27 -9.64 16 8 C 0.52 6.98 7.79 -10.98 -0.09 6.89 16 9 O -0.53 -9.58 15.70 5.56 0.09 -9.49 16 10 C -0.11 -1.05 5.42 -29.03 -0.16 -1.21 16 11 C -0.01 -0.09 4.41 -104.28 -0.46 -0.55 16 12 C -0.15 -1.36 9.80 -39.45 -0.39 -1.74 16 13 C 0.10 0.94 11.18 -17.55 -0.20 0.74 16 14 N -0.47 -5.33 10.36 -13.22 -0.14 -5.46 16 15 C 0.11 1.25 10.99 -17.50 -0.19 1.05 16 16 C -0.08 -0.86 6.34 -39.36 -0.25 -1.11 16 17 Cl -0.05 -0.55 27.58 -51.86 -1.43 -1.98 16 18 C -0.15 -2.88 5.65 -26.61 -0.15 -3.03 16 19 C 0.17 4.17 4.90 -3.71 -0.02 4.15 16 20 N -0.58 -14.12 2.71 -165.04 -0.45 -14.56 16 21 C -0.25 -6.78 9.58 -15.06 -0.14 -6.93 16 22 H 0.07 1.70 7.89 -52.49 -0.41 1.29 16 23 C 0.00 0.10 4.90 -17.43 -0.09 0.01 16 24 N -0.90 -25.99 11.20 55.49 0.62 -25.37 16 25 Si 0.90 21.49 29.59 -169.99 -5.03 16.46 16 26 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 27 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 28 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 29 H 0.05 0.98 5.74 -51.93 -0.30 0.68 16 30 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 31 H 0.05 1.16 8.14 -51.93 -0.42 0.74 16 32 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 33 H 0.06 0.99 8.14 -51.93 -0.42 0.56 16 34 H 0.39 3.82 8.60 -40.82 -0.35 3.47 16 35 H 0.11 0.90 7.24 -51.93 -0.38 0.52 16 36 H 0.11 0.66 8.07 -51.93 -0.42 0.24 16 37 H 0.14 0.91 8.06 -52.48 -0.42 0.49 16 38 H 0.16 0.99 8.06 -52.49 -0.42 0.57 16 39 H 0.16 1.44 8.06 -52.49 -0.42 1.02 16 40 H 0.05 1.06 8.14 -51.93 -0.42 0.64 16 41 H 0.05 1.07 8.14 -51.93 -0.42 0.64 16 42 H 0.02 0.54 7.52 -51.93 -0.39 0.15 16 43 H 0.09 2.40 6.03 -51.93 -0.31 2.08 16 44 H 0.25 7.13 8.31 -40.82 -0.34 6.79 16 LS Contribution 370.28 15.07 5.58 5.58 Total: -1.00 -32.78 370.28 -9.55 -42.32 By element: Atomic # 1 Polarization: 9.56 SS G_CDS: -6.22 Total: 3.34 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -2.30 Total: -1.20 kcal Atomic # 7 Polarization: -54.80 SS G_CDS: -0.24 Total: -55.04 kcal Atomic # 8 Polarization: -9.58 SS G_CDS: 0.09 Total: -9.49 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.03 Total: 16.46 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.43 Total: -1.98 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -32.78 -9.55 -42.32 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000947721975.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.506 kcal (2) G-P(sol) polarization free energy of solvation -32.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.323 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds