Wall clock time and date at job start Tue Mar 31 2020 20:14:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09004 * 109.58252 * 2 1 4 4 C 1.53188 * 109.58623 * 120.27879 * 2 1 3 5 5 H 1.09000 * 109.50303 * 294.37616 * 4 2 1 6 6 N 1.46495 * 109.49735 * 54.47703 * 4 2 1 7 7 C 1.34785 * 120.00189 * 204.99994 * 6 4 2 8 8 O 1.21284 * 119.99545 * 359.97438 * 7 6 4 9 9 C 1.50703 * 120.00005 * 179.97438 * 7 6 4 10 10 C 1.50695 * 109.46826 * 179.97438 * 9 7 6 11 11 C 1.38650 * 120.79357 * 100.00242 * 10 9 7 12 12 C 1.38198 * 119.17688 * 179.97438 * 11 10 9 13 13 N 1.31882 * 120.79220 * 0.02562 * 12 11 10 14 14 C 1.31841 * 121.74019 * 359.97438 * 13 12 11 15 15 C 1.38355 * 120.74657 * 359.74342 * 14 13 12 16 16 Cl 1.73600 * 120.43648 * 180.28645 * 15 14 13 17 17 C 1.53048 * 109.31202 * 174.42443 * 4 2 1 18 18 C 1.53034 * 109.53722 * 298.63470 * 17 4 2 19 19 C 1.53198 * 109.31446 * 61.36687 * 18 17 4 20 20 N 1.46924 * 109.58961 * 239.71887 * 2 1 3 21 21 C 1.36936 * 120.63195 * 6.60068 * 20 2 1 22 22 H 1.08005 * 119.99715 * 330.25879 * 21 20 2 23 23 C 1.38809 * 120.00262 * 150.24590 * 21 20 2 24 24 N 1.31625 * 119.99934 * 344.60477 * 23 21 20 25 25 Si 1.86794 * 120.00187 * 164.59761 * 23 21 20 26 26 H 1.48503 * 109.47104 * 0.02562 * 25 23 21 27 27 H 1.48503 * 109.47427 * 120.00327 * 25 23 21 28 28 H 1.48507 * 109.47291 * 240.00689 * 25 23 21 29 29 H 1.08992 * 109.46826 * 299.99976 * 1 2 3 30 30 H 1.09000 * 109.46992 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.46646 * 60.00022 * 1 2 3 32 32 H 0.96998 * 120.00582 * 24.99365 * 6 4 2 33 33 H 1.08993 * 109.47047 * 300.00236 * 9 7 6 34 34 H 1.09003 * 109.46774 * 60.00535 * 9 7 6 35 35 H 1.07997 * 120.41404 * 359.95774 * 11 10 9 36 36 H 1.07998 * 119.60241 * 179.97438 * 12 11 10 37 37 H 1.08002 * 119.62681 * 180.02562 * 14 13 12 38 38 H 1.08997 * 109.45816 * 58.65910 * 17 4 2 39 39 H 1.08997 * 109.45505 * 178.62986 * 17 4 2 40 40 H 1.08994 * 109.49864 * 181.31484 * 18 17 4 41 41 H 1.09000 * 109.50215 * 301.41693 * 18 17 4 42 42 H 1.09001 * 109.58488 * 65.14718 * 19 18 17 43 43 H 1.08992 * 109.59007 * 185.43646 * 19 18 17 44 44 H 0.96998 * 119.99749 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8954 1.0270 0.0000 4 6 2.0436 -0.7277 1.2464 5 1 1.7660 -0.1640 2.1371 6 7 1.4515 -2.0662 1.3098 7 6 1.3285 -2.6932 2.4965 8 8 1.7084 -2.1493 3.5119 9 6 0.7189 -4.0699 2.5618 10 6 0.6984 -4.5428 3.9925 11 6 -0.4611 -4.4660 4.7488 12 6 -0.4425 -4.9098 6.0575 13 7 0.6604 -5.4011 6.5881 14 6 1.7814 -5.4897 5.8999 15 6 1.8377 -5.0707 4.5825 16 17 3.3161 -5.1980 3.6815 17 6 3.5676 -0.8463 1.1713 18 6 3.9570 -1.6657 -0.0612 19 6 3.4652 -0.9486 -1.3225 20 7 2.0227 -0.6980 -1.1953 21 6 1.1539 -1.1103 -2.1702 22 1 0.1394 -1.3765 -1.9120 23 6 1.5768 -1.1861 -3.4901 24 7 2.6894 -0.5878 -3.8600 25 14 0.5673 -2.1372 -4.7413 26 1 -0.6301 -2.7121 -4.0772 27 1 0.1378 -1.2223 -5.8293 28 1 1.3911 -3.2330 -5.3122 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 -0.8900 32 1 1.1480 -2.5013 0.4977 33 1 -0.2997 -4.0348 2.1756 34 1 1.3121 -4.7587 1.9603 35 1 -1.3675 -4.0641 4.3208 36 1 -1.3416 -4.8528 6.6530 37 1 2.6647 -5.8982 6.3684 38 1 4.0062 0.1489 1.0992 39 1 3.9378 -1.3422 2.0685 40 1 5.0413 -1.7696 -0.1013 41 1 3.4984 -2.6527 -0.0018 42 1 3.9904 0.0003 -1.4316 43 1 3.6542 -1.5734 -2.1953 44 1 2.9851 -0.6411 -4.7823 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000993822785.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:14:23 Heat of formation + Delta-G solvation = 7.969992 kcal Electronic energy + Delta-G solvation = -27673.954451 eV Core-core repulsion = 23845.410914 eV Total energy + Delta-G solvation = -3828.543538 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -40.65023 -39.58747 -37.66228 -36.73496 -34.10090 -33.86084 -32.45342 -31.75054 -31.24217 -29.78527 -28.35041 -26.23256 -25.05396 -23.76246 -23.13975 -21.93772 -20.86186 -20.27691 -18.77108 -17.20869 -17.10581 -16.86971 -16.45579 -16.16974 -15.35163 -14.95796 -14.87977 -14.47314 -14.21499 -13.97510 -13.68816 -13.61036 -13.22323 -13.05491 -12.84625 -12.68081 -12.52752 -12.12948 -11.89336 -11.78027 -11.34018 -11.30550 -11.26948 -11.03731 -10.75680 -10.67125 -10.55283 -10.15401 -10.05650 -10.01463 -9.79269 -9.71298 -9.45960 -9.33854 -9.11107 -8.60084 -8.49606 -6.72343 -5.86819 -3.32685 0.74029 0.88970 1.91698 2.88640 3.29574 3.33813 3.37373 3.39278 3.68586 4.19557 4.25775 4.39600 4.41384 4.70230 4.96339 5.10217 5.13767 5.26403 5.28260 5.35228 5.37213 5.53891 5.56244 5.63595 5.71451 5.88191 5.92627 6.07489 6.17849 6.26370 6.29460 6.37261 6.49668 6.63460 6.64027 6.74019 6.89920 6.91607 7.06083 7.33182 7.61058 7.61297 7.72472 7.94357 8.36462 8.55133 9.12438 9.75483 10.33146 11.21193 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.016502 B = 0.003282 C = 0.003211 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1696.326030 B = 8530.524367 C = 8718.166600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.159 3.841 3 H 0.039 0.961 4 C 0.136 3.864 5 H 0.075 0.925 6 N -0.698 5.698 7 C 0.516 3.484 8 O -0.545 6.545 9 C -0.114 4.114 10 C -0.005 4.005 11 C -0.151 4.151 12 C 0.100 3.900 13 N -0.474 5.474 14 C 0.112 3.888 15 C -0.073 4.073 16 Cl -0.047 7.047 17 C -0.120 4.120 18 C -0.139 4.139 19 C 0.172 3.828 20 N -0.586 5.586 21 C -0.257 4.257 22 H 0.070 0.930 23 C 0.007 3.993 24 N -0.898 5.898 25 Si 0.899 3.101 26 H -0.278 1.278 27 H -0.291 1.291 28 H -0.290 1.290 29 H 0.038 0.962 30 H 0.053 0.947 31 H 0.063 0.937 32 H 0.409 0.591 33 H 0.110 0.890 34 H 0.111 0.889 35 H 0.143 0.857 36 H 0.162 0.838 37 H 0.163 0.837 38 H 0.061 0.939 39 H 0.050 0.950 40 H 0.046 0.954 41 H 0.052 0.948 42 H 0.017 0.983 43 H 0.085 0.915 44 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.897 -8.387 14.450 17.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C 0.052 3.948 3 H 0.056 0.944 4 C 0.030 3.970 5 H 0.093 0.907 6 N -0.349 5.349 7 C 0.301 3.699 8 O -0.423 6.423 9 C -0.154 4.154 10 C -0.014 4.014 11 C -0.171 4.171 12 C -0.057 4.057 13 N -0.183 5.183 14 C -0.046 4.046 15 C -0.102 4.102 16 Cl -0.018 7.018 17 C -0.159 4.159 18 C -0.178 4.178 19 C 0.046 3.954 20 N -0.310 5.310 21 C -0.386 4.386 22 H 0.088 0.912 23 C -0.192 4.192 24 N -0.542 5.542 25 Si 0.729 3.271 26 H -0.203 1.203 27 H -0.218 1.218 28 H -0.216 1.216 29 H 0.057 0.943 30 H 0.072 0.928 31 H 0.082 0.918 32 H 0.245 0.755 33 H 0.128 0.872 34 H 0.129 0.871 35 H 0.161 0.839 36 H 0.179 0.821 37 H 0.180 0.820 38 H 0.080 0.920 39 H 0.069 0.931 40 H 0.065 0.935 41 H 0.071 0.929 42 H 0.036 0.964 43 H 0.103 0.897 44 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges -3.446 -8.259 15.757 18.121 hybrid contribution -0.340 -0.314 -2.198 2.246 sum -3.786 -8.572 13.559 16.482 Atomic orbital electron populations 1.21779 0.95669 1.01362 1.00446 1.20717 0.93324 0.93947 0.86817 0.94369 1.21527 0.92901 0.82895 0.99706 0.90672 1.45956 1.61512 1.18681 1.08785 1.20054 0.79207 0.86585 0.84099 1.90694 1.50075 1.67094 1.34454 1.20786 1.04567 0.96596 0.93483 1.19660 0.92036 0.93962 0.95733 1.22060 0.98526 1.01114 0.95421 1.22812 0.96468 0.93623 0.92779 1.67784 0.99043 1.14419 1.37084 1.22726 0.96808 0.96070 0.88979 1.21976 0.89087 1.04301 0.94857 1.98397 1.32713 1.96460 1.74263 1.21760 0.95499 1.00408 0.98246 1.22124 0.98905 0.99515 0.97285 1.20782 0.83190 0.97144 0.94237 1.44156 1.03138 1.64952 1.18717 1.19170 0.95136 1.38208 0.86132 0.91191 1.25113 0.97758 0.99352 0.97026 1.70036 1.23884 1.43567 1.16717 0.86289 0.79592 0.79569 0.81649 1.20253 1.21777 1.21626 0.94260 0.92833 0.91770 0.75497 0.87219 0.87118 0.83895 0.82072 0.81969 0.92006 0.93117 0.93530 0.92874 0.96440 0.89709 0.93668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.32 7.73 37.16 0.29 -2.03 16 2 C 0.16 3.02 3.19 -67.60 -0.22 2.80 16 3 H 0.04 0.77 8.14 -51.93 -0.42 0.35 16 4 C 0.14 2.32 2.33 -67.81 -0.16 2.16 16 5 H 0.08 1.31 7.58 -51.93 -0.39 0.92 16 6 N -0.70 -10.82 3.46 -53.69 -0.19 -11.01 16 7 C 0.52 7.67 7.69 -10.98 -0.08 7.59 16 8 O -0.55 -9.82 15.64 5.55 0.09 -9.73 16 9 C -0.11 -1.30 5.35 -29.04 -0.16 -1.46 16 10 C 0.00 -0.06 4.45 -104.29 -0.46 -0.52 16 11 C -0.15 -1.50 9.78 -39.44 -0.39 -1.89 16 12 C 0.10 0.98 11.18 -17.54 -0.20 0.78 16 13 N -0.47 -5.54 10.36 -13.22 -0.14 -5.68 16 14 C 0.11 1.28 10.99 -17.50 -0.19 1.09 16 15 C -0.07 -0.89 6.26 -39.35 -0.25 -1.14 16 16 Cl -0.05 -0.58 27.60 -51.86 -1.43 -2.02 16 17 C -0.12 -2.09 5.58 -26.69 -0.15 -2.24 16 18 C -0.14 -2.57 5.93 -26.61 -0.16 -2.72 16 19 C 0.17 3.82 5.28 -3.69 -0.02 3.80 16 20 N -0.59 -12.99 2.66 -164.74 -0.44 -13.43 16 21 C -0.26 -6.23 8.57 -15.06 -0.13 -6.36 16 22 H 0.07 1.64 6.23 -52.48 -0.33 1.31 16 23 C 0.01 0.18 4.94 -17.43 -0.09 0.09 16 24 N -0.90 -24.63 11.23 55.49 0.62 -24.00 16 25 Si 0.90 20.27 29.58 -169.99 -5.03 15.25 16 26 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 27 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 28 H -0.29 -6.64 7.11 56.52 0.40 -6.24 16 29 H 0.04 0.59 8.14 -51.93 -0.42 0.17 16 30 H 0.05 0.89 6.39 -51.93 -0.33 0.56 16 31 H 0.06 1.20 7.64 -51.93 -0.40 0.80 16 32 H 0.41 6.41 7.78 -40.82 -0.32 6.09 16 33 H 0.11 0.97 8.04 -51.93 -0.42 0.55 16 34 H 0.11 1.19 7.45 -51.93 -0.39 0.80 16 35 H 0.14 1.06 8.06 -52.49 -0.42 0.64 16 36 H 0.16 1.07 8.06 -52.49 -0.42 0.64 16 37 H 0.16 1.49 8.06 -52.49 -0.42 1.07 16 38 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 39 H 0.05 0.89 8.14 -51.93 -0.42 0.47 16 40 H 0.05 0.81 8.14 -51.93 -0.42 0.38 16 41 H 0.05 0.98 7.53 -51.93 -0.39 0.59 16 42 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 43 H 0.08 2.13 6.16 -51.93 -0.32 1.81 16 44 H 0.25 6.78 8.31 -40.82 -0.34 6.44 16 LS Contribution 367.24 15.07 5.53 5.53 Total: -1.00 -29.58 367.24 -9.55 -39.13 By element: Atomic # 1 Polarization: 12.22 SS G_CDS: -6.22 Total: 6.00 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -2.35 Total: -0.05 kcal Atomic # 7 Polarization: -53.98 SS G_CDS: -0.14 Total: -54.12 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: 0.09 Total: -9.73 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.03 Total: 15.25 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.43 Total: -2.02 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -29.58 -9.55 -39.13 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000993822785.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.100 kcal (2) G-P(sol) polarization free energy of solvation -29.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.130 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds