Wall clock time and date at job start Tue Mar 31 2020 21:55:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 N 1.46500 * 109.46776 * 2 1 4 4 C 1.35630 * 125.67035 * 264.15339 * 3 2 1 5 5 C 1.35522 * 108.84810 * 180.02562 * 4 3 2 6 6 Cl 1.73598 * 126.07386 * 180.26172 * 5 4 3 7 7 C 1.39884 * 107.85134 * 0.02562 * 5 4 3 8 8 C 1.37630 * 125.67942 * 84.18527 * 3 2 1 9 9 C 1.46670 * 126.22087 * 0.02562 * 8 3 2 10 10 O 1.21690 * 120.00190 * 343.30819 * 9 8 3 11 11 N 1.34786 * 120.00004 * 163.31341 * 9 8 3 12 12 C 1.47158 * 120.70859 * 173.42498 * 11 9 8 13 13 C 1.53888 * 108.02761 * 132.76104 * 12 11 9 14 14 H 1.08993 * 112.09488 * 181.91316 * 13 12 11 15 15 C 1.54548 * 107.82631 * 305.86688 * 13 12 11 16 16 C 1.55862 * 104.09591 * 89.28433 * 15 13 12 17 17 C 1.54547 * 104.99540 * 359.97438 * 16 15 13 18 18 H 1.08997 * 112.17644 * 146.42284 * 17 16 15 19 19 C 1.47162 * 120.70715 * 353.14884 * 11 9 8 20 20 N 1.48303 * 107.21044 * 58.35711 * 13 12 11 21 21 C 1.36943 * 128.07375 * 106.70454 * 20 13 12 22 22 H 1.07995 * 120.00273 * 12.55716 * 21 20 13 23 23 C 1.38810 * 119.99787 * 192.55323 * 21 20 13 24 24 N 1.31625 * 120.00508 * 14.35475 * 23 21 20 25 25 Si 1.86803 * 119.99914 * 194.35041 * 23 21 20 26 26 H 1.48491 * 109.47074 * 0.02562 * 25 23 21 27 27 H 1.48503 * 109.46995 * 120.00425 * 25 23 21 28 28 H 1.48505 * 109.47056 * 239.99879 * 25 23 21 29 29 H 1.08999 * 109.46861 * 63.69730 * 1 2 3 30 30 H 1.08998 * 109.47005 * 183.68919 * 1 2 3 31 31 H 1.08999 * 109.47203 * 303.69657 * 1 2 3 32 32 H 1.08996 * 109.46870 * 239.99866 * 2 1 3 33 33 H 1.09001 * 109.46412 * 119.99931 * 2 1 3 34 34 H 1.07994 * 125.58045 * 0.02887 * 4 3 2 35 35 H 1.08006 * 126.45264 * 179.97438 * 7 5 4 36 36 H 1.09001 * 109.74572 * 252.38968 * 12 11 9 37 37 H 1.08989 * 109.75313 * 13.07416 * 12 11 9 38 38 H 1.09005 * 110.36178 * 207.91594 * 15 13 12 39 39 H 1.08998 * 110.36536 * 330.23211 * 15 13 12 40 40 H 1.09001 * 110.27693 * 241.09655 * 16 15 13 41 41 H 1.08994 * 110.29981 * 118.87882 * 16 15 13 42 42 H 1.09001 * 109.74871 * 346.87301 * 19 11 9 43 43 H 1.09001 * 109.75425 * 107.60550 * 19 11 9 44 44 H 0.96991 * 120.00674 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.3877 2.0895 -1.0961 5 6 2.7829 3.3257 -0.7059 6 17 3.3392 4.5976 -1.7483 7 6 2.6579 3.3965 0.6856 8 6 2.1791 2.1758 1.1122 9 6 1.8945 1.7931 2.4992 10 8 1.2030 0.8193 2.7321 11 7 2.3990 2.5201 3.5159 12 6 2.0088 2.2390 4.9067 13 6 3.2885 2.1921 5.7602 14 1 3.0776 1.9538 6.8026 15 6 4.2523 1.1726 5.1121 16 6 5.0776 2.0216 4.0984 17 6 4.5274 3.4589 4.2395 18 1 5.3004 4.2121 4.0870 19 6 3.3563 3.6080 3.2594 20 7 3.9639 3.5040 5.6107 21 6 4.0476 4.5198 6.5253 22 1 3.7682 4.3449 7.5537 23 6 4.4918 5.7742 6.1304 24 7 4.5627 6.0748 4.8509 25 14 4.9889 7.0360 7.4151 26 1 4.8190 6.4552 8.7711 27 1 6.4109 7.4139 7.2135 28 1 4.1326 8.2420 7.2817 29 1 -0.3633 0.4554 -0.9213 30 1 -0.3633 -1.0255 0.0661 31 1 -0.3633 0.5701 0.8550 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 2.3699 1.7277 -2.1135 35 1 2.8921 4.2473 1.3084 36 1 1.3515 3.0283 5.2715 37 1 1.4954 1.2790 4.9584 38 1 4.9063 0.7359 5.8670 39 1 3.6902 0.3924 4.5989 40 1 4.9228 1.6542 3.0839 41 1 6.1364 1.9936 4.3555 42 1 3.7236 3.5414 2.2353 43 1 2.8700 4.5710 3.4151 44 1 4.8735 6.9512 4.5750 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001029587177.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:55:46 Heat of formation + Delta-G solvation = 64.152084 kcal Electronic energy + Delta-G solvation = -28558.762516 eV Core-core repulsion = 24732.655217 eV Total energy + Delta-G solvation = -3826.107299 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 2.06 seconds Orbital eigenvalues (eV) -41.55357 -39.66597 -37.57825 -36.30238 -34.51192 -33.43435 -32.44014 -30.96701 -29.32635 -29.18641 -29.03510 -26.28078 -24.05914 -24.00332 -23.43889 -21.79509 -20.77211 -19.68209 -19.26930 -18.74811 -17.47965 -16.34142 -15.77502 -15.66434 -15.31275 -14.95028 -14.67273 -14.40270 -14.12075 -13.81309 -13.55301 -13.26000 -13.11567 -12.90511 -12.71863 -12.67851 -12.51035 -12.13107 -11.79747 -11.72784 -11.43156 -11.35125 -11.27845 -11.04484 -10.86981 -10.77276 -10.66360 -10.33309 -10.03522 -9.88283 -9.63236 -9.58095 -9.47126 -8.82336 -8.49616 -8.24509 -7.99321 -6.87801 -5.87684 -3.18480 1.58586 2.19206 2.55240 2.88839 3.35018 3.42812 3.44169 3.58291 3.69692 4.41293 4.61028 4.80021 4.91943 4.95707 5.16819 5.18558 5.30334 5.30797 5.53586 5.60225 5.62380 5.71231 5.79293 5.80586 5.89861 6.01562 6.04899 6.09530 6.11876 6.27838 6.36719 6.50911 6.53989 6.61803 6.63246 6.71895 6.84642 6.87550 6.94433 7.10350 7.24844 7.43257 7.64427 7.99776 8.10327 8.57934 9.03451 9.66375 10.42219 11.26447 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.012872 B = 0.004334 C = 0.003494 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2174.769890 B = 6459.344559 C = 8011.913793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.105 3.895 3 N -0.404 5.404 4 C 0.021 3.979 5 C -0.121 4.121 6 Cl -0.055 7.055 7 C -0.140 4.140 8 C -0.021 4.021 9 C 0.578 3.422 10 O -0.568 6.568 11 N -0.573 5.573 12 C 0.104 3.896 13 C 0.134 3.866 14 H 0.078 0.922 15 C -0.124 4.124 16 C -0.135 4.135 17 C 0.168 3.832 18 H 0.119 0.881 19 C 0.077 3.923 20 N -0.584 5.584 21 C -0.226 4.226 22 H 0.078 0.922 23 C -0.002 4.002 24 N -0.912 5.912 25 Si 0.909 3.091 26 H -0.280 1.280 27 H -0.290 1.290 28 H -0.291 1.291 29 H 0.055 0.945 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.087 0.913 33 H 0.100 0.900 34 H 0.173 0.827 35 H 0.174 0.826 36 H 0.064 0.936 37 H 0.076 0.924 38 H 0.054 0.946 39 H 0.055 0.945 40 H 0.049 0.951 41 H 0.054 0.946 42 H 0.090 0.910 43 H 0.086 0.914 44 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.652 -9.799 -11.616 15.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.016 4.016 3 N -0.078 5.078 4 C -0.115 4.115 5 C -0.154 4.154 6 Cl -0.026 7.026 7 C -0.166 4.166 8 C -0.135 4.135 9 C 0.366 3.634 10 O -0.451 6.451 11 N -0.303 5.303 12 C -0.021 4.021 13 C 0.026 3.974 14 H 0.096 0.904 15 C -0.163 4.163 16 C -0.174 4.174 17 C 0.060 3.940 18 H 0.137 0.863 19 C -0.046 4.046 20 N -0.305 5.305 21 C -0.354 4.354 22 H 0.095 0.905 23 C -0.199 4.199 24 N -0.558 5.558 25 Si 0.739 3.261 26 H -0.205 1.205 27 H -0.217 1.217 28 H -0.218 1.218 29 H 0.074 0.926 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.106 0.894 33 H 0.119 0.881 34 H 0.190 0.810 35 H 0.191 0.809 36 H 0.083 0.917 37 H 0.094 0.906 38 H 0.073 0.927 39 H 0.074 0.926 40 H 0.068 0.932 41 H 0.072 0.928 42 H 0.107 0.893 43 H 0.104 0.896 44 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -4.026 -10.277 -11.448 15.902 hybrid contribution 0.291 0.956 0.343 1.056 sum -3.735 -9.321 -11.105 14.972 Atomic orbital electron populations 1.22085 0.93781 1.03129 1.03082 1.21959 0.96249 0.78982 1.04400 1.43969 1.46993 1.11802 1.05005 1.21588 1.05964 0.91791 0.92138 1.19954 1.12600 0.91142 0.91729 1.98314 1.88533 1.49900 1.65895 1.22002 1.03296 0.98090 0.93162 1.20161 1.12709 0.92207 0.88445 1.16892 0.80420 0.82910 0.83143 1.90724 1.41435 1.27803 1.85103 1.47873 1.42928 1.33663 1.05803 1.22424 0.98533 1.00741 0.80355 1.21941 0.90776 0.88128 0.96595 0.90394 1.22747 0.98118 0.97314 0.98168 1.22904 0.98851 0.98241 0.97433 1.21798 0.94048 0.93672 0.84457 0.86307 1.23340 0.91436 0.89231 1.00623 1.45204 1.59441 1.12771 1.13080 1.19042 1.39133 0.87949 0.89253 0.90467 1.24747 1.02389 0.96622 0.96172 1.69855 1.51351 1.21339 1.13258 0.86107 0.78085 0.81217 0.80665 1.20532 1.21660 1.21842 0.92622 0.90893 0.90599 0.89436 0.88139 0.81018 0.80880 0.91723 0.90551 0.92683 0.92609 0.93225 0.92761 0.89278 0.89574 0.93505 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.69 10.09 37.16 0.37 -1.31 16 2 C 0.10 1.13 6.06 -4.04 -0.02 1.10 16 3 N -0.40 -5.36 2.76 -112.83 -0.31 -5.67 16 4 C 0.02 0.26 11.35 -16.84 -0.19 0.07 16 5 C -0.12 -1.69 6.66 -39.94 -0.27 -1.95 16 6 Cl -0.05 -0.71 29.30 -51.86 -1.52 -2.23 16 7 C -0.14 -2.21 8.59 -39.09 -0.34 -2.54 16 8 C -0.02 -0.35 6.61 -81.99 -0.54 -0.89 16 9 C 0.58 10.45 7.59 -12.85 -0.10 10.35 16 10 O -0.57 -10.83 13.56 5.20 0.07 -10.76 16 11 N -0.57 -10.75 2.27 -173.35 -0.39 -11.15 16 12 C 0.10 1.96 5.92 -3.22 -0.02 1.94 16 13 C 0.13 2.63 4.27 -65.66 -0.28 2.35 16 14 H 0.08 1.46 8.14 -51.93 -0.42 1.04 16 15 C -0.12 -2.22 6.31 -24.39 -0.15 -2.38 16 16 C -0.14 -2.53 6.22 -24.39 -0.15 -2.68 16 17 C 0.17 3.61 3.13 -65.89 -0.21 3.40 16 18 H 0.12 2.90 6.38 -51.93 -0.33 2.57 16 19 C 0.08 1.51 4.27 -3.45 -0.01 1.49 16 20 N -0.58 -13.50 2.82 -152.86 -0.43 -13.93 16 21 C -0.23 -5.79 10.35 -15.06 -0.16 -5.95 16 22 H 0.08 1.95 7.87 -52.49 -0.41 1.54 16 23 C 0.00 -0.06 5.37 -17.43 -0.09 -0.15 16 24 N -0.91 -24.13 10.57 55.49 0.59 -23.54 16 25 Si 0.91 20.89 29.58 -169.99 -5.03 15.86 16 26 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 27 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 28 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 29 H 0.05 0.52 8.14 -51.93 -0.42 0.09 16 30 H 0.07 0.62 8.14 -51.93 -0.42 0.20 16 31 H 0.08 1.03 7.13 -51.93 -0.37 0.66 16 32 H 0.09 0.66 8.12 -51.93 -0.42 0.24 16 33 H 0.10 1.24 7.12 -51.93 -0.37 0.87 16 34 H 0.17 1.48 8.06 -52.49 -0.42 1.05 16 35 H 0.17 2.87 5.35 -52.48 -0.28 2.59 16 36 H 0.06 1.30 8.14 -51.93 -0.42 0.87 16 37 H 0.08 1.38 7.08 -51.94 -0.37 1.01 16 38 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 39 H 0.06 0.97 7.84 -51.93 -0.41 0.56 16 40 H 0.05 0.89 7.83 -51.93 -0.41 0.48 16 41 H 0.05 1.00 8.14 -51.93 -0.42 0.57 16 42 H 0.09 1.62 3.97 -51.93 -0.21 1.41 16 43 H 0.09 1.95 7.82 -51.93 -0.41 1.54 16 44 H 0.25 6.63 8.31 -40.82 -0.34 6.29 16 LS Contribution 356.69 15.07 5.38 5.38 Total: -1.00 -27.92 356.69 -9.88 -37.80 By element: Atomic # 1 Polarization: 11.46 SS G_CDS: -6.07 Total: 5.38 kcal Atomic # 6 Polarization: 5.01 SS G_CDS: -2.16 Total: 2.85 kcal Atomic # 7 Polarization: -53.74 SS G_CDS: -0.55 Total: -54.29 kcal Atomic # 8 Polarization: -10.83 SS G_CDS: 0.07 Total: -10.76 kcal Atomic # 14 Polarization: 20.89 SS G_CDS: -5.03 Total: 15.86 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.52 Total: -2.23 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -27.92 -9.88 -37.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001029587177.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.955 kcal (2) G-P(sol) polarization free energy of solvation -27.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.802 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.06 seconds