Wall clock time and date at job start Tue Mar 31 2020 21:55:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46499 * 109.47751 * 2 1 4 4 C 1.35634 * 125.67684 * 265.08124 * 3 2 1 5 5 C 1.35510 * 108.84973 * 180.23996 * 4 3 2 6 6 Cl 1.73604 * 126.07293 * 179.78501 * 5 4 3 7 7 C 1.39886 * 107.85556 * 359.75079 * 5 4 3 8 8 C 1.37635 * 125.67744 * 84.88788 * 3 2 1 9 9 C 1.46668 * 126.22185 * 0.03235 * 8 3 2 10 10 O 1.21700 * 120.00136 * 353.26066 * 9 8 3 11 11 N 1.34777 * 120.00124 * 173.26547 * 9 8 3 12 12 C 1.46765 * 125.33249 * 354.89219 * 11 9 8 13 13 C 1.53983 * 106.67382 * 198.41856 * 12 11 9 14 14 H 1.08994 * 113.34968 * 94.44924 * 13 12 11 15 15 C 1.53676 * 109.29163 * 221.16418 * 13 12 11 16 16 N 1.46661 * 107.97279 * 93.07041 * 15 13 12 17 17 C 1.36936 * 125.34027 * 179.31394 * 16 15 13 18 18 H 1.07999 * 119.99291 * 347.34512 * 17 16 15 19 19 C 1.38812 * 120.00200 * 167.34861 * 17 16 15 20 20 N 1.31620 * 120.00204 * 2.44054 * 19 17 16 21 21 Si 1.86798 * 119.99682 * 182.44321 * 19 17 16 22 22 H 1.48502 * 109.47017 * 94.98613 * 21 19 17 23 23 H 1.48504 * 109.46989 * 214.98407 * 21 19 17 24 24 H 1.48499 * 109.47402 * 334.98840 * 21 19 17 25 25 C 1.46763 * 109.32841 * 359.28715 * 16 15 13 26 26 C 1.53977 * 106.67684 * 18.45254 * 25 16 15 27 27 H 1.09007 * 112.80170 * 94.13847 * 26 25 16 28 28 C 1.46655 * 125.33678 * 174.85568 * 11 9 8 29 29 H 1.09003 * 109.46836 * 305.10167 * 1 2 3 30 30 H 1.08996 * 109.46948 * 65.09644 * 1 2 3 31 31 H 1.09003 * 109.47450 * 185.10601 * 1 2 3 32 32 H 1.09001 * 109.46950 * 239.99479 * 2 1 3 33 33 H 1.09007 * 109.47182 * 120.00226 * 2 1 3 34 34 H 1.07996 * 125.56943 * 359.97438 * 4 3 2 35 35 H 1.07998 * 126.45595 * 180.02562 * 7 5 4 36 36 H 1.08996 * 110.01274 * 79.11222 * 12 11 9 37 37 H 1.09003 * 110.01495 * 317.72087 * 12 11 9 38 38 H 1.09002 * 109.76757 * 212.69613 * 15 13 12 39 39 H 1.08997 * 109.77189 * 333.43724 * 15 13 12 40 40 H 0.96992 * 119.99687 * 179.97438 * 20 19 17 41 41 H 1.09004 * 110.01863 * 137.75350 * 25 16 15 42 42 H 1.09000 * 110.01869 * 259.14713 * 25 16 15 43 43 H 1.09001 * 109.76798 * 59.69502 * 28 11 9 44 44 H 1.09001 * 109.77057 * 298.95326 * 28 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0185 1.3811 0.0000 4 6 2.3713 2.0954 -1.0977 5 6 2.7771 3.3277 -0.7064 6 17 3.3304 4.6007 -1.7491 7 6 2.6703 3.3921 0.6868 8 6 2.1922 2.1711 1.1136 9 6 1.9238 1.7827 2.5022 10 8 1.3922 0.7149 2.7435 11 7 2.2657 2.6084 3.5110 12 6 3.0036 3.8685 3.3635 13 6 3.5646 4.2174 4.7545 14 1 4.5856 3.8685 4.9085 15 6 3.4078 5.7261 5.0013 16 7 2.1381 5.9404 5.7032 17 6 1.6525 7.1547 6.1091 18 1 2.2960 8.0220 6.1055 19 6 0.3334 7.2708 6.5254 20 7 -0.4371 6.2049 6.5757 21 14 -0.3482 8.9399 7.0142 22 1 -1.0330 9.5554 5.8491 23 1 -1.3178 8.7722 8.1264 24 1 0.7642 9.8190 7.4556 25 6 1.4689 4.6493 5.9017 26 6 2.5455 3.5623 5.7280 27 1 2.9950 3.2580 6.6734 28 6 1.9582 2.3890 4.9281 29 1 -0.3633 0.5910 0.8408 30 1 -0.3633 0.4327 -0.9321 31 1 -0.3634 -1.0236 0.0915 32 1 1.8933 -0.5139 -0.8899 33 1 1.8933 -0.5139 0.8900 34 1 2.3385 1.7387 -2.1165 35 1 2.9156 4.2388 1.3108 36 1 2.3318 4.6566 3.0236 37 1 3.8204 3.7416 2.6529 38 1 4.2335 6.0871 5.6146 39 1 3.3967 6.2563 4.0490 40 1 -1.3587 6.2860 6.8669 41 1 1.0461 4.5986 6.9051 42 1 0.6829 4.5182 5.1581 43 1 2.4072 1.4536 5.2622 44 1 0.8781 2.3506 5.0693 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001049217982.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:55:58 Heat of formation + Delta-G solvation = 47.927144 kcal Electronic energy + Delta-G solvation = -27608.212992 eV Core-core repulsion = 23781.402126 eV Total energy + Delta-G solvation = -3826.810866 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.69969 -39.90921 -37.99161 -36.48069 -35.18008 -34.11610 -32.32439 -30.93283 -29.60172 -29.33722 -28.99530 -25.65940 -25.57980 -23.94746 -23.38868 -21.39001 -20.98153 -20.19181 -19.27981 -19.16714 -17.34003 -16.81690 -16.44619 -15.90226 -15.36648 -15.17154 -14.72643 -14.53886 -14.46409 -14.11000 -13.69659 -13.36573 -13.29608 -13.03549 -12.89133 -12.77338 -12.71435 -12.26259 -12.03009 -11.74517 -11.64488 -11.51825 -11.43745 -11.36713 -10.91230 -10.88360 -10.80103 -10.50188 -10.09212 -10.07374 -9.85457 -9.81645 -9.67818 -8.78764 -8.61833 -8.53551 -8.24378 -6.80805 -5.76859 -3.12010 1.34054 2.00840 2.35683 2.64039 3.33866 3.34038 3.39003 3.44632 3.46297 4.44611 4.47430 4.50986 4.70102 4.79383 4.83421 5.01489 5.06998 5.10945 5.22928 5.39592 5.47383 5.48108 5.52961 5.58892 5.63350 5.66970 5.81478 5.86446 5.96389 5.97382 6.16292 6.22902 6.28182 6.32866 6.49943 6.51383 6.64986 6.68212 6.82787 6.91556 7.49558 7.57055 7.64094 7.77640 8.21439 8.25942 9.18943 9.79516 10.44983 11.35198 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.012358 B = 0.003425 C = 0.003075 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2265.257153 B = 8173.871979 C = 9104.924697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.101 3.899 3 N -0.402 5.402 4 C 0.029 3.971 5 C -0.122 4.122 6 Cl -0.052 7.052 7 C -0.138 4.138 8 C -0.026 4.026 9 C 0.600 3.400 10 O -0.552 6.552 11 N -0.593 5.593 12 C 0.102 3.898 13 C -0.109 4.109 14 H 0.090 0.910 15 C 0.145 3.855 16 N -0.601 5.601 17 C -0.232 4.232 18 H 0.077 0.923 19 C -0.003 4.003 20 N -0.918 5.918 21 Si 0.911 3.089 22 H -0.288 1.288 23 H -0.291 1.291 24 H -0.280 1.280 25 C 0.182 3.818 26 C -0.124 4.124 27 H 0.094 0.906 28 C 0.125 3.875 29 H 0.071 0.929 30 H 0.057 0.943 31 H 0.075 0.925 32 H 0.089 0.911 33 H 0.106 0.894 34 H 0.175 0.825 35 H 0.166 0.834 36 H 0.081 0.919 37 H 0.077 0.923 38 H 0.025 0.975 39 H 0.028 0.972 40 H 0.253 0.747 41 H 0.067 0.933 42 H 0.032 0.968 43 H 0.062 0.938 44 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.509 -11.689 -14.280 19.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.020 4.020 3 N -0.075 5.075 4 C -0.108 4.108 5 C -0.155 4.155 6 Cl -0.024 7.024 7 C -0.163 4.163 8 C -0.140 4.140 9 C 0.389 3.611 10 O -0.433 6.433 11 N -0.324 5.324 12 C -0.021 4.021 13 C -0.129 4.129 14 H 0.109 0.891 15 C 0.018 3.982 16 N -0.327 5.327 17 C -0.361 4.361 18 H 0.095 0.905 19 C -0.200 4.200 20 N -0.565 5.565 21 Si 0.741 3.259 22 H -0.215 1.215 23 H -0.217 1.217 24 H -0.206 1.206 25 C 0.057 3.943 26 C -0.144 4.144 27 H 0.112 0.888 28 C 0.003 3.997 29 H 0.090 0.910 30 H 0.076 0.924 31 H 0.094 0.906 32 H 0.108 0.892 33 H 0.124 0.876 34 H 0.192 0.808 35 H 0.183 0.817 36 H 0.099 0.901 37 H 0.096 0.904 38 H 0.043 0.957 39 H 0.045 0.955 40 H 0.064 0.936 41 H 0.085 0.915 42 H 0.050 0.950 43 H 0.081 0.919 44 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 6.909 -12.484 -14.166 20.106 hybrid contribution -0.414 1.106 -0.005 1.181 sum 6.496 -11.378 -14.171 19.299 Atomic orbital electron populations 1.22080 0.93658 1.03378 1.03011 1.22063 0.96331 0.78772 1.04813 1.43999 1.46911 1.11881 1.04756 1.21658 1.05343 0.91611 0.92175 1.19933 1.12663 0.91308 0.91633 1.98323 1.88532 1.49688 1.65825 1.21907 1.03507 0.97483 0.93453 1.19959 1.13482 0.92369 0.88168 1.16406 0.78859 0.83268 0.82526 1.90779 1.45194 1.22608 1.84715 1.47842 1.55081 1.22432 1.07033 1.22589 0.95517 0.85737 0.98245 1.22830 0.98771 0.97775 0.93497 0.89136 1.21094 0.90426 0.91073 0.95581 1.44203 1.19191 1.03339 1.66012 1.19013 0.93748 0.85740 1.37559 0.90525 1.24879 0.96012 0.97420 1.01675 1.69935 1.07055 1.26808 1.52661 0.86123 0.78758 0.83273 0.77744 1.21545 1.21721 1.20550 1.21237 0.90179 0.81318 1.01533 1.23249 0.98097 0.95768 0.97324 0.88778 1.21770 1.01138 0.98162 0.78642 0.90989 0.92395 0.90605 0.89234 0.87620 0.80752 0.81671 0.90067 0.90443 0.95672 0.95461 0.93646 0.91478 0.94996 0.91937 0.90667 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.57 10.13 37.16 0.38 -1.20 16 2 C 0.10 0.96 6.09 -4.04 -0.02 0.94 16 3 N -0.40 -4.78 2.76 -112.83 -0.31 -5.09 16 4 C 0.03 0.31 11.35 -16.85 -0.19 0.11 16 5 C -0.12 -1.50 6.66 -39.94 -0.27 -1.77 16 6 Cl -0.05 -0.59 29.30 -51.86 -1.52 -2.11 16 7 C -0.14 -1.87 9.17 -39.09 -0.36 -2.23 16 8 C -0.03 -0.38 6.83 -81.98 -0.56 -0.93 16 9 C 0.60 9.81 7.79 -12.86 -0.10 9.71 16 10 O -0.55 -9.88 14.60 5.19 0.08 -9.80 16 11 N -0.59 -9.56 3.31 -173.87 -0.58 -10.14 16 12 C 0.10 1.53 4.24 -3.39 -0.01 1.51 16 13 C -0.11 -1.72 4.10 -88.47 -0.36 -2.08 16 14 H 0.09 1.20 8.14 -51.93 -0.42 0.78 16 15 C 0.14 2.77 6.58 -3.60 -0.02 2.75 16 16 N -0.60 -14.62 3.38 -171.88 -0.58 -15.20 16 17 C -0.23 -6.28 10.22 -15.06 -0.15 -6.44 16 18 H 0.08 2.01 7.83 -52.49 -0.41 1.60 16 19 C 0.00 -0.08 5.48 -17.43 -0.10 -0.18 16 20 N -0.92 -26.39 10.42 55.49 0.58 -25.81 16 21 Si 0.91 21.74 29.55 -169.99 -5.02 16.72 16 22 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 23 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 24 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 25 C 0.18 4.18 4.60 -3.39 -0.02 4.17 16 26 C -0.12 -2.16 4.10 -88.48 -0.36 -2.52 16 27 H 0.09 1.51 8.14 -51.92 -0.42 1.09 16 28 C 0.13 2.06 6.19 -3.61 -0.02 2.04 16 29 H 0.07 0.93 7.63 -51.93 -0.40 0.53 16 30 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 31 H 0.08 0.60 8.14 -51.93 -0.42 0.17 16 32 H 0.09 0.57 8.12 -51.93 -0.42 0.15 16 33 H 0.11 1.17 6.78 -51.92 -0.35 0.81 16 34 H 0.18 1.26 8.06 -52.49 -0.42 0.84 16 35 H 0.17 2.21 4.64 -52.49 -0.24 1.96 16 36 H 0.08 1.38 6.86 -51.93 -0.36 1.02 16 37 H 0.08 0.99 6.26 -51.93 -0.32 0.67 16 38 H 0.03 0.48 8.14 -51.93 -0.42 0.05 16 39 H 0.03 0.52 7.63 -51.93 -0.40 0.12 16 40 H 0.25 7.12 8.31 -40.82 -0.34 6.78 16 41 H 0.07 1.74 7.01 -51.93 -0.36 1.38 16 42 H 0.03 0.82 7.31 -51.93 -0.38 0.44 16 43 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 44 H 0.08 1.36 7.63 -51.93 -0.40 0.96 16 LS Contribution 361.09 15.07 5.44 5.44 Total: -1.00 -31.16 361.09 -10.23 -41.39 By element: Atomic # 1 Polarization: 6.86 SS G_CDS: -6.14 Total: 0.72 kcal Atomic # 6 Polarization: 6.06 SS G_CDS: -2.17 Total: 3.89 kcal Atomic # 7 Polarization: -55.35 SS G_CDS: -0.89 Total: -56.24 kcal Atomic # 8 Polarization: -9.88 SS G_CDS: 0.08 Total: -9.80 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -5.02 Total: 16.72 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.52 Total: -2.11 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -31.16 -10.23 -41.39 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001049217982.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.317 kcal (2) G-P(sol) polarization free energy of solvation -31.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.154 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.390 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds