Wall clock time and date at job start Tue Mar 31 2020 21:56:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46504 * 109.47198 * 2 1 4 4 C 1.35623 * 125.67968 * 263.07595 * 3 2 1 5 5 C 1.35509 * 108.85315 * 180.02562 * 4 3 2 6 6 Cl 1.73602 * 126.07603 * 180.02562 * 5 4 3 7 7 C 1.39888 * 107.85283 * 359.74234 * 5 4 3 8 8 C 1.37639 * 125.67203 * 83.10085 * 3 2 1 9 9 C 1.46669 * 126.22514 * 359.97438 * 8 3 2 10 10 O 1.21694 * 120.00114 * 5.38946 * 9 8 3 11 11 N 1.34774 * 120.00369 * 185.38922 * 9 8 3 12 12 C 1.46495 * 120.00426 * 174.99600 * 11 9 8 13 13 H 1.08997 * 110.68640 * 32.00845 * 12 11 9 14 14 C 1.54861 * 110.62269 * 269.02489 * 12 11 9 15 15 C 1.55840 * 103.44558 * 241.50749 * 14 12 11 16 16 H 1.08995 * 115.56438 * 158.81191 * 15 14 12 17 17 C 1.55846 * 105.06642 * 288.18117 * 15 14 12 18 18 C 1.55875 * 103.53307 * 72.42603 * 17 15 14 19 19 C 1.55841 * 110.62932 * 155.00143 * 12 11 9 20 20 H 1.08997 * 115.56220 * 319.67863 * 19 12 11 21 21 N 1.50241 * 101.05399 * 85.54850 * 19 12 11 22 22 C 1.36933 * 130.84086 * 233.98929 * 21 19 12 23 23 H 1.08000 * 120.00059 * 0.02562 * 22 21 19 24 24 C 1.38812 * 120.00012 * 179.97438 * 22 21 19 25 25 N 1.31616 * 120.00287 * 0.02562 * 24 22 21 26 26 Si 1.86802 * 119.99942 * 180.02562 * 24 22 21 27 27 H 1.48502 * 109.47344 * 60.00394 * 26 24 22 28 28 H 1.48498 * 109.46979 * 180.02562 * 26 24 22 29 29 H 1.48504 * 109.47085 * 300.00184 * 26 24 22 30 30 H 1.08997 * 109.47408 * 60.00061 * 1 2 3 31 31 H 1.09003 * 109.47277 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47198 * 299.99951 * 1 2 3 33 33 H 1.09005 * 109.46910 * 240.00286 * 2 1 3 34 34 H 1.09002 * 109.47415 * 120.00410 * 2 1 3 35 35 H 1.08008 * 125.57350 * 0.04170 * 4 3 2 36 36 H 1.08003 * 126.45566 * 180.25773 * 7 5 4 37 37 H 0.97007 * 119.99630 * 354.99843 * 11 9 8 38 38 H 1.08998 * 110.62418 * 123.02315 * 14 12 11 39 39 H 1.08991 * 110.62781 * 359.97438 * 14 12 11 40 40 H 1.09001 * 110.62599 * 190.31564 * 17 15 14 41 41 H 1.09000 * 110.62184 * 313.17096 * 17 15 14 42 42 H 1.08997 * 110.09624 * 241.13919 * 18 17 15 43 43 H 1.08995 * 111.59932 * 117.81071 * 18 17 15 44 44 H 0.96996 * 120.00851 * 179.97438 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.4072 2.0828 -1.0936 5 6 2.7956 3.3212 -0.7041 6 17 3.3758 4.5847 -1.7437 7 6 2.6397 3.4029 0.6836 8 6 2.1593 2.1827 1.1100 9 6 1.8490 1.8091 2.4940 10 8 1.5171 0.6680 2.7563 11 7 1.9314 2.7293 3.4752 12 6 1.5168 2.3865 4.8378 13 1 1.7081 1.3337 5.0451 14 6 0.0203 2.7216 5.0531 15 6 0.0472 3.7836 6.1933 16 1 -0.8362 4.4180 6.2662 17 6 0.4293 2.9889 7.4783 18 6 1.9396 2.6642 7.2707 19 6 2.2440 3.2918 5.8771 20 1 3.2953 3.4930 5.6714 21 7 1.3393 4.4910 5.8975 22 6 1.6091 5.8197 5.7052 23 1 2.6192 6.1412 5.4987 24 6 0.5841 6.7532 5.7748 25 7 -0.6470 6.3614 6.0260 26 14 0.9520 8.5656 5.5117 27 1 1.5253 8.7628 4.1561 28 1 -0.3033 9.3489 5.6374 29 1 1.9267 9.0262 6.5332 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 1.8933 -0.5138 -0.8901 34 1 1.8934 -0.5139 0.8899 35 1 2.4072 1.7146 -2.1090 36 1 2.8572 4.2594 1.3045 37 1 2.2652 3.6188 3.2791 38 1 -0.5304 1.8349 5.3673 39 1 -0.4132 3.1432 4.1463 40 1 0.2982 3.6079 8.3658 41 1 -0.1635 2.0774 7.5564 42 1 2.0909 1.5850 7.2472 43 1 2.5583 3.1229 8.0419 44 1 -1.3633 7.0137 6.0750 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001098417297.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:56:50 Heat of formation + Delta-G solvation = 48.669310 kcal Electronic energy + Delta-G solvation = -27615.634239 eV Core-core repulsion = 23788.855556 eV Total energy + Delta-G solvation = -3826.778683 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.130 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.54508 -39.56527 -38.07387 -36.43624 -34.48246 -33.53734 -32.51732 -29.92404 -29.28618 -29.10504 -28.67809 -27.43252 -24.24960 -23.79697 -22.85630 -21.13247 -20.48878 -19.82800 -19.35819 -18.67502 -17.76115 -17.00520 -16.00089 -15.73298 -15.37673 -14.85954 -14.70532 -14.39947 -14.14382 -14.04805 -13.76157 -13.55912 -13.14889 -12.98569 -12.79372 -12.65923 -12.19772 -12.08187 -11.84604 -11.50062 -11.37393 -11.24934 -11.13243 -10.94740 -10.88378 -10.87750 -10.52818 -10.38126 -10.12019 -9.92990 -9.80847 -9.30314 -9.19605 -8.97710 -8.74556 -8.58535 -8.20749 -6.96154 -5.75138 -3.14368 1.44118 2.06960 2.42269 2.78706 3.37936 3.42656 3.43600 3.51443 3.67659 4.40845 4.54684 4.74885 4.88420 4.91855 5.10535 5.12902 5.16986 5.35113 5.44909 5.52488 5.62503 5.66663 5.70904 5.85185 5.91370 5.99592 6.03882 6.08111 6.12470 6.27348 6.38805 6.39976 6.47186 6.58291 6.70894 6.73167 6.79897 6.92919 6.98056 7.07981 7.30098 7.46147 7.77685 7.92814 8.15803 8.50005 9.06415 9.70023 10.50271 11.33873 Molecular weight = 337.13amu Principal moments of inertia in cm(-1) A = 0.010210 B = 0.004109 C = 0.003191 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2741.838950 B = 6812.911010 C = 8773.185599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.099 3.901 3 N -0.401 5.401 4 C 0.025 3.975 5 C -0.120 4.120 6 Cl -0.054 7.054 7 C -0.129 4.129 8 C -0.027 4.027 9 C 0.585 3.415 10 O -0.558 6.558 11 N -0.690 5.690 12 C 0.131 3.869 13 H 0.083 0.917 14 C -0.144 4.144 15 C 0.154 3.846 16 H 0.154 0.846 17 C -0.138 4.138 18 C -0.127 4.127 19 C 0.125 3.875 20 H 0.087 0.913 21 N -0.590 5.590 22 C -0.216 4.216 23 H 0.078 0.922 24 C -0.008 4.008 25 N -0.920 5.920 26 Si 0.914 3.086 27 H -0.285 1.285 28 H -0.290 1.290 29 H -0.286 1.286 30 H 0.057 0.943 31 H 0.075 0.925 32 H 0.070 0.930 33 H 0.088 0.912 34 H 0.110 0.890 35 H 0.174 0.826 36 H 0.155 0.845 37 H 0.406 0.594 38 H 0.053 0.947 39 H 0.059 0.941 40 H 0.054 0.946 41 H 0.049 0.951 42 H 0.050 0.950 43 H 0.059 0.941 44 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.693 -11.266 -11.569 16.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.022 4.022 3 N -0.075 5.075 4 C -0.112 4.112 5 C -0.154 4.154 6 Cl -0.026 7.026 7 C -0.155 4.155 8 C -0.141 4.141 9 C 0.371 3.629 10 O -0.439 6.439 11 N -0.338 5.338 12 C 0.025 3.975 13 H 0.101 0.899 14 C -0.184 4.184 15 C 0.047 3.953 16 H 0.170 0.830 17 C -0.178 4.178 18 C -0.167 4.167 19 C 0.016 3.984 20 H 0.105 0.895 21 N -0.311 5.311 22 C -0.344 4.344 23 H 0.096 0.904 24 C -0.204 4.204 25 N -0.567 5.567 26 Si 0.745 3.255 27 H -0.211 1.211 28 H -0.216 1.216 29 H -0.213 1.213 30 H 0.076 0.924 31 H 0.094 0.906 32 H 0.089 0.911 33 H 0.107 0.893 34 H 0.128 0.872 35 H 0.192 0.808 36 H 0.172 0.828 37 H 0.242 0.758 38 H 0.072 0.928 39 H 0.078 0.922 40 H 0.073 0.927 41 H 0.067 0.933 42 H 0.069 0.931 43 H 0.078 0.922 44 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges 4.260 -11.984 -11.431 17.101 hybrid contribution 0.404 1.533 -0.468 1.653 sum 4.664 -10.452 -11.899 16.509 Atomic orbital electron populations 1.22078 0.93791 1.03120 1.03171 1.22095 0.96196 0.78871 1.05019 1.43998 1.46469 1.11872 1.05126 1.21626 1.05378 0.91817 0.92332 1.19873 1.12543 0.91222 0.91717 1.98319 1.87663 1.50506 1.66085 1.21309 1.03935 0.96859 0.93436 1.20203 1.13221 0.91838 0.88797 1.16871 0.77724 0.85199 0.83089 1.90743 1.50005 1.19437 1.83695 1.45712 1.64133 1.15147 1.08809 1.22664 0.96167 0.98755 0.79956 0.89937 1.23486 0.94182 0.99245 1.01519 1.23763 0.93251 0.89645 0.88614 0.82960 1.23236 0.94713 0.98819 1.01000 1.23031 0.97579 0.98228 0.97842 1.23159 0.94359 0.88104 0.92760 0.89469 1.46536 1.02807 1.00558 1.81222 1.18953 0.93973 0.80317 1.41157 0.90408 1.24683 0.95308 0.97974 1.02405 1.69437 0.99397 1.32443 1.55458 0.86160 0.76851 0.84523 0.77998 1.21140 1.21630 1.21291 0.92378 0.90624 0.91133 0.89334 0.87221 0.80845 0.82765 0.75847 0.92790 0.92177 0.92710 0.93265 0.93084 0.92226 0.93479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.65 10.23 37.16 0.38 -1.27 16 2 C 0.10 1.00 6.14 -4.04 -0.02 0.97 16 3 N -0.40 -4.98 2.76 -112.83 -0.31 -5.29 16 4 C 0.03 0.28 11.35 -16.85 -0.19 0.09 16 5 C -0.12 -1.55 6.66 -39.94 -0.27 -1.81 16 6 Cl -0.05 -0.65 29.30 -51.86 -1.52 -2.17 16 7 C -0.13 -1.83 10.35 -39.09 -0.40 -2.23 16 8 C -0.03 -0.39 6.88 -81.98 -0.56 -0.96 16 9 C 0.58 9.79 7.77 -12.86 -0.10 9.69 16 10 O -0.56 -10.17 14.14 5.19 0.07 -10.10 16 11 N -0.69 -11.79 5.06 -52.70 -0.27 -12.06 16 12 C 0.13 2.37 2.86 -65.44 -0.19 2.18 16 13 H 0.08 1.49 7.20 -51.93 -0.37 1.11 16 14 C -0.14 -2.86 6.23 -24.23 -0.15 -3.01 16 15 C 0.15 3.42 4.72 -62.80 -0.30 3.12 16 16 H 0.15 3.91 5.52 -51.93 -0.29 3.63 16 17 C -0.14 -2.67 6.46 -23.68 -0.15 -2.82 16 18 C -0.13 -2.24 6.53 -23.68 -0.15 -2.40 16 19 C 0.12 2.37 5.01 -62.80 -0.31 2.06 16 20 H 0.09 1.57 8.14 -51.93 -0.42 1.15 16 21 N -0.59 -13.65 2.98 -145.82 -0.43 -14.09 16 22 C -0.22 -5.55 10.59 -15.06 -0.16 -5.71 16 23 H 0.08 1.92 7.83 -52.49 -0.41 1.51 16 24 C -0.01 -0.21 5.50 -17.43 -0.10 -0.30 16 25 N -0.92 -25.46 10.46 55.49 0.58 -24.88 16 26 Si 0.91 21.28 29.55 -169.99 -5.02 16.26 16 27 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 28 H -0.29 -6.90 7.11 56.52 0.40 -6.50 16 29 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 30 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 31 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 32 H 0.07 0.93 7.86 -51.93 -0.41 0.52 16 33 H 0.09 0.61 8.12 -51.93 -0.42 0.19 16 34 H 0.11 1.29 6.61 -51.93 -0.34 0.94 16 35 H 0.17 1.36 8.06 -52.48 -0.42 0.94 16 36 H 0.15 2.11 7.45 -52.48 -0.39 1.72 16 37 H 0.41 6.88 7.56 -40.82 -0.31 6.58 16 38 H 0.05 0.99 7.82 -51.93 -0.41 0.59 16 39 H 0.06 1.30 7.98 -51.93 -0.41 0.89 16 40 H 0.05 1.11 8.14 -51.93 -0.42 0.69 16 41 H 0.05 0.85 7.82 -51.93 -0.41 0.44 16 42 H 0.05 0.79 7.85 -51.93 -0.41 0.38 16 43 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 44 H 0.25 6.94 8.31 -40.82 -0.34 6.60 16 LS Contribution 369.56 15.07 5.57 5.57 Total: -1.00 -28.97 369.56 -10.26 -39.24 By element: Atomic # 1 Polarization: 16.17 SS G_CDS: -6.25 Total: 9.92 kcal Atomic # 6 Polarization: 0.28 SS G_CDS: -2.68 Total: -2.40 kcal Atomic # 7 Polarization: -55.88 SS G_CDS: -0.43 Total: -56.32 kcal Atomic # 8 Polarization: -10.17 SS G_CDS: 0.07 Total: -10.10 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -5.02 Total: 16.26 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -1.52 Total: -2.17 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -28.97 -10.26 -39.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001098417297.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.906 kcal (2) G-P(sol) polarization free energy of solvation -28.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.237 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds