Wall clock time and date at job start Tue Mar 31 2020 20:41:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47317 * 2 1 4 4 H 1.08998 * 109.47565 * 305.00629 * 3 2 1 5 5 C 1.52999 * 109.47451 * 184.99880 * 3 2 1 6 6 O 1.42897 * 109.47388 * 305.00475 * 5 3 2 7 7 C 1.42898 * 113.99961 * 180.02562 * 6 5 3 8 8 N 1.46504 * 109.46822 * 64.99847 * 3 2 1 9 9 C 1.34773 * 120.00316 * 275.00099 * 8 3 2 10 10 O 1.21283 * 120.00233 * 0.02562 * 9 8 3 11 11 C 1.50697 * 120.00012 * 179.97438 * 9 8 3 12 12 C 1.53001 * 109.47362 * 180.02562 * 11 9 8 13 13 C 1.50696 * 109.47698 * 180.02562 * 12 11 9 14 14 C 1.39873 * 126.03489 * 269.69895 * 13 12 11 15 15 C 1.50700 * 125.90452 * 359.97438 * 14 13 12 16 16 N 1.30841 * 108.20063 * 179.81512 * 14 13 12 17 17 N 1.40092 * 108.20522 * 0.43540 * 16 14 13 18 18 C 1.46491 * 126.03893 * 179.74594 * 17 16 14 19 19 C 1.50700 * 109.46814 * 269.97133 * 18 17 16 20 20 H 1.07996 * 120.00189 * 0.02562 * 19 18 17 21 21 C 1.37878 * 119.99959 * 179.97438 * 19 18 17 22 22 N 1.31517 * 120.00049 * 0.02562 * 21 19 18 23 23 Si 1.86806 * 120.00105 * 179.97438 * 21 19 18 24 24 H 1.48504 * 109.46928 * 0.02562 * 23 21 19 25 25 H 1.48496 * 109.47103 * 120.00100 * 23 21 19 26 26 H 1.48497 * 109.47070 * 240.00374 * 23 21 19 27 27 C 1.34946 * 107.92019 * 359.71801 * 17 16 14 28 28 C 1.50708 * 126.12303 * 179.97438 * 27 17 16 29 29 H 1.09002 * 109.47153 * 299.99641 * 1 2 3 30 30 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.47261 * 59.99813 * 1 2 3 32 32 H 1.08996 * 109.47853 * 120.00331 * 2 1 3 33 33 H 1.09002 * 109.47153 * 240.00359 * 2 1 3 34 34 H 1.08997 * 109.46928 * 65.00743 * 5 3 2 35 35 H 1.08999 * 109.47047 * 184.99963 * 5 3 2 36 36 H 1.09001 * 109.47596 * 59.99616 * 7 6 5 37 37 H 1.09000 * 109.46906 * 180.02562 * 7 6 5 38 38 H 1.09005 * 109.46949 * 299.99397 * 7 6 5 39 39 H 0.97003 * 119.99976 * 95.00125 * 8 3 2 40 40 H 1.08995 * 109.47634 * 300.00249 * 11 9 8 41 41 H 1.09010 * 109.46880 * 60.00413 * 11 9 8 42 42 H 1.09000 * 109.47300 * 300.00804 * 12 11 9 43 43 H 1.09001 * 109.46934 * 60.00060 * 12 11 9 44 44 H 1.08998 * 109.46865 * 90.00140 * 15 14 13 45 45 H 1.08998 * 109.47316 * 210.01003 * 15 14 13 46 46 H 1.09000 * 109.46675 * 330.00778 * 15 14 13 47 47 H 1.08997 * 109.47655 * 29.96887 * 18 17 16 48 48 H 1.08997 * 109.47691 * 149.97481 * 18 17 16 49 49 H 0.96998 * 119.99872 * 180.02562 * 22 21 19 50 50 H 1.09001 * 109.46872 * 270.02293 * 28 27 17 51 51 H 1.08997 * 109.47277 * 30.02852 * 28 27 17 52 52 H 1.09000 * 109.46620 * 150.02528 * 28 27 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 -0.8417 5 6 3.5648 1.4443 -0.1257 6 8 4.1294 0.6404 0.9120 7 6 5.5566 0.5752 0.8855 8 7 1.6524 2.0974 1.2518 9 6 0.4351 2.6643 1.3670 10 8 -0.3397 2.6319 0.4345 11 6 0.0363 3.3375 2.6549 12 6 -1.3829 3.8934 2.5217 13 6 -1.7816 4.5672 3.8093 14 6 -2.4238 3.9578 4.8923 15 6 -2.8383 2.5113 4.9740 16 7 -2.5994 4.8600 5.8236 17 7 -2.0827 6.0760 5.3579 18 6 -2.0805 7.3469 6.0864 19 6 -3.3447 8.1062 5.7757 20 1 -4.0766 7.6840 5.1031 21 6 -3.5673 9.3393 6.3508 22 7 -2.6761 9.8533 7.1702 23 14 -5.1339 10.2808 5.9650 24 1 -5.9663 9.4914 5.0220 25 1 -5.8935 10.5131 7.2197 26 1 -4.7877 11.5859 5.3471 27 6 -1.5868 5.8696 4.1200 28 6 -0.9335 6.9047 3.2406 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5139 -0.8900 32 1 1.8934 -0.5138 0.8899 33 1 1.8933 -0.5138 -0.8900 34 1 3.8499 1.0378 -1.0960 35 1 3.9355 2.4655 -0.0366 36 1 5.9683 1.5784 0.9959 37 1 5.9069 -0.0538 1.7039 38 1 5.8833 0.1508 -0.0639 39 1 2.2719 2.1231 1.9979 40 1 0.0673 2.6129 3.4685 41 1 0.7277 4.1529 2.8680 42 1 -1.4145 4.6180 1.7080 43 1 -2.0741 3.0778 2.3088 44 1 -2.0254 1.9240 5.4009 45 1 -3.7220 2.4217 5.6058 46 1 -3.0674 2.1420 3.9744 47 1 -2.0280 7.1518 7.1575 48 1 -1.2173 7.9388 5.7822 49 1 -2.8329 10.7207 7.5750 50 1 -1.6912 7.3875 2.6235 51 1 -0.4415 7.6520 3.8630 52 1 -0.1955 6.4229 2.5993 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000151011577.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:41:15 Heat of formation + Delta-G solvation = -39.642845 kcal Electronic energy + Delta-G solvation = -29473.844834 eV Core-core repulsion = 25474.193673 eV Total energy + Delta-G solvation = -3999.651161 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 337.215 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -40.61962 -40.08071 -38.37146 -35.74963 -34.33693 -33.37607 -32.46695 -32.40056 -30.26829 -29.52271 -28.93236 -26.93228 -26.43442 -25.85344 -24.07808 -23.54638 -22.24826 -20.96113 -20.37361 -18.77585 -18.60792 -17.24049 -17.06315 -16.68654 -16.42304 -15.92680 -15.59285 -15.42978 -15.20675 -14.52896 -14.32176 -14.23392 -13.79393 -13.42157 -13.21119 -13.10426 -12.90742 -12.85995 -12.66757 -12.48963 -12.33380 -12.25711 -12.06008 -11.86280 -11.76864 -11.61669 -11.54185 -11.31380 -11.23309 -11.21538 -10.96288 -10.92513 -10.81041 -10.65645 -10.25184 -10.16432 -9.78896 -9.68854 -9.56152 -9.11317 -8.64688 -8.15441 -7.44212 -6.25997 -4.33051 2.67958 2.78127 3.04304 3.20262 3.28204 3.31702 3.34257 3.45719 3.64509 4.30215 4.35771 4.60258 4.82219 4.83272 4.91129 4.96514 5.00590 5.07831 5.13277 5.23204 5.25251 5.31943 5.35237 5.37862 5.44009 5.52832 5.68311 5.74233 5.81124 5.86598 5.87119 5.97631 6.02000 6.05102 6.05852 6.09828 6.26892 6.31112 6.37944 6.39519 6.50819 6.58263 6.64667 6.88660 7.04637 7.14072 7.45130 7.54595 7.67426 7.89291 8.08063 8.24160 8.69017 8.77385 9.33404 10.81602 Molecular weight = 337.22amu Principal moments of inertia in cm(-1) A = 0.018597 B = 0.002130 C = 0.002062 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1505.298073 B =13141.714485 C =13573.852455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.128 4.128 3 C 0.148 3.852 4 H 0.099 0.901 5 C 0.051 3.949 6 O -0.387 6.387 7 C 0.031 3.969 8 N -0.728 5.728 9 C 0.514 3.486 10 O -0.536 6.536 11 C -0.134 4.134 12 C -0.009 4.009 13 C -0.268 4.268 14 C 0.051 3.949 15 C -0.064 4.064 16 N -0.298 5.298 17 N -0.325 5.325 18 C 0.257 3.743 19 C -0.534 4.534 20 H 0.064 0.936 21 C 0.065 3.935 22 N -0.892 5.892 23 Si 0.906 3.094 24 H -0.271 1.271 25 H -0.281 1.281 26 H -0.281 1.281 27 C 0.093 3.907 28 C -0.085 4.085 29 H 0.059 0.941 30 H 0.044 0.956 31 H 0.058 0.942 32 H 0.071 0.929 33 H 0.064 0.936 34 H 0.063 0.937 35 H 0.057 0.943 36 H 0.042 0.958 37 H 0.087 0.913 38 H 0.041 0.959 39 H 0.404 0.596 40 H 0.091 0.909 41 H 0.090 0.910 42 H 0.067 0.933 43 H 0.068 0.932 44 H 0.065 0.935 45 H 0.065 0.935 46 H 0.069 0.931 47 H 0.051 0.949 48 H 0.051 0.949 49 H 0.267 0.733 50 H 0.077 0.923 51 H 0.071 0.929 52 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.613 -17.826 -14.373 27.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.167 4.167 3 C 0.043 3.957 4 H 0.117 0.883 5 C -0.026 4.026 6 O -0.305 6.305 7 C -0.066 4.066 8 N -0.381 5.381 9 C 0.301 3.699 10 O -0.412 6.412 11 C -0.174 4.174 12 C -0.048 4.048 13 C -0.280 4.280 14 C -0.114 4.114 15 C -0.123 4.123 16 N -0.122 5.122 17 N -0.105 5.105 18 C 0.139 3.861 19 C -0.572 4.572 20 H 0.083 0.917 21 C -0.139 4.139 22 N -0.530 5.530 23 Si 0.733 3.267 24 H -0.196 1.196 25 H -0.206 1.206 26 H -0.206 1.206 27 C -0.039 4.039 28 C -0.144 4.144 29 H 0.078 0.922 30 H 0.063 0.937 31 H 0.077 0.923 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.081 0.919 35 H 0.075 0.925 36 H 0.060 0.940 37 H 0.105 0.895 38 H 0.059 0.941 39 H 0.238 0.762 40 H 0.109 0.891 41 H 0.108 0.892 42 H 0.085 0.915 43 H 0.087 0.913 44 H 0.084 0.916 45 H 0.084 0.916 46 H 0.088 0.912 47 H 0.069 0.931 48 H 0.069 0.931 49 H 0.077 0.923 50 H 0.095 0.905 51 H 0.090 0.910 52 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 14.514 -17.385 -13.514 26.373 hybrid contribution 0.125 0.717 -0.607 0.947 sum 14.639 -16.668 -14.121 26.297 Atomic orbital electron populations 1.21825 0.94794 1.00514 1.03212 1.21843 0.96833 0.95532 1.02479 1.21081 0.91539 0.94388 0.88642 0.88291 1.22889 0.93371 0.94998 0.91327 1.87896 1.20196 1.70623 1.51824 1.22759 0.80873 1.01064 1.01857 1.46091 1.17340 1.58191 1.16477 1.20988 0.80940 0.77599 0.90342 1.90697 1.50893 1.58787 1.40867 1.21748 1.00091 1.01009 0.94565 1.19379 0.92874 0.99069 0.93516 1.19360 1.16030 0.93266 0.99370 1.21944 1.00464 0.96124 0.92835 1.20023 1.01101 0.88995 1.02182 1.77273 1.21181 0.90522 1.23180 1.49231 1.40950 1.08839 1.11469 1.19647 0.98703 0.74866 0.92896 1.21349 1.04192 1.02724 1.28946 0.91749 1.24936 0.97335 0.97073 0.94521 1.69929 1.34806 1.18461 1.29834 0.86304 0.82558 0.79452 0.78410 1.19555 1.20642 1.20649 1.20772 0.99315 0.95402 0.88369 1.20344 0.99911 0.96300 0.97817 0.92167 0.93739 0.92310 0.91070 0.91714 0.91905 0.92492 0.93961 0.89488 0.94075 0.76191 0.89084 0.89216 0.91460 0.91309 0.91612 0.91613 0.91235 0.93094 0.93123 0.92335 0.90483 0.90987 0.91110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.50 8.51 37.16 0.32 -1.18 16 2 C -0.13 -1.08 5.33 -26.73 -0.14 -1.23 16 3 C 0.15 1.21 2.66 -67.93 -0.18 1.03 16 4 H 0.10 0.91 7.58 -51.93 -0.39 0.51 16 5 C 0.05 0.32 5.68 37.16 0.21 0.53 16 6 O -0.39 -2.77 9.65 -35.23 -0.34 -3.11 16 7 C 0.03 0.15 11.01 101.05 1.11 1.26 16 8 N -0.73 -6.45 5.01 -53.81 -0.27 -6.72 16 9 C 0.51 5.86 6.40 -10.99 -0.07 5.79 16 10 O -0.54 -7.71 13.12 5.56 0.07 -7.64 16 11 C -0.13 -1.53 5.68 -27.88 -0.16 -1.69 16 12 C -0.01 -0.14 4.41 -27.88 -0.12 -0.26 16 13 C -0.27 -4.81 5.35 -105.06 -0.56 -5.38 16 14 C 0.05 0.97 7.22 -82.40 -0.59 0.38 16 15 C -0.06 -0.93 10.26 36.01 0.37 -0.56 16 16 N -0.30 -6.91 12.58 33.67 0.42 -6.48 16 17 N -0.33 -7.65 3.59 -58.32 -0.21 -7.86 16 18 C 0.26 6.62 6.00 -5.20 -0.03 6.59 16 19 C -0.53 -14.85 9.39 -34.44 -0.32 -15.18 16 20 H 0.06 1.86 7.81 -52.49 -0.41 1.45 16 21 C 0.06 1.78 5.46 -17.82 -0.10 1.68 16 22 N -0.89 -25.24 13.29 55.43 0.74 -24.51 16 23 Si 0.91 21.33 29.54 -169.99 -5.02 16.31 16 24 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 25 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 26 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 27 C 0.09 1.85 6.93 -82.26 -0.57 1.28 16 28 C -0.09 -1.41 9.72 36.01 0.35 -1.06 16 29 H 0.06 0.72 5.64 -51.93 -0.29 0.43 16 30 H 0.04 0.41 8.14 -51.93 -0.42 -0.01 16 31 H 0.06 0.66 7.85 -51.93 -0.41 0.25 16 32 H 0.07 0.64 7.73 -51.93 -0.40 0.24 16 33 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 34 H 0.06 0.31 8.14 -51.93 -0.42 -0.11 16 35 H 0.06 0.33 8.14 -51.93 -0.42 -0.09 16 36 H 0.04 0.17 8.14 -51.93 -0.42 -0.25 16 37 H 0.09 0.35 8.14 -51.93 -0.42 -0.08 16 38 H 0.04 0.16 8.14 -51.93 -0.42 -0.26 16 39 H 0.40 3.02 8.38 -40.82 -0.34 2.67 16 40 H 0.09 0.97 8.14 -51.93 -0.42 0.55 16 41 H 0.09 0.96 8.14 -51.92 -0.42 0.54 16 42 H 0.07 1.00 7.73 -51.93 -0.40 0.60 16 43 H 0.07 1.00 7.21 -51.93 -0.37 0.63 16 44 H 0.07 0.83 8.14 -51.93 -0.42 0.40 16 45 H 0.06 0.95 8.14 -51.93 -0.42 0.52 16 46 H 0.07 0.88 7.25 -51.93 -0.38 0.51 16 47 H 0.05 1.41 8.14 -51.93 -0.42 0.99 16 48 H 0.05 1.29 7.05 -51.93 -0.37 0.92 16 49 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 50 H 0.08 1.27 8.14 -51.93 -0.42 0.84 16 51 H 0.07 1.21 7.08 -51.93 -0.37 0.85 16 52 H 0.07 0.94 7.77 -51.93 -0.40 0.54 16 LS Contribution 421.34 15.07 6.35 6.35 Total: -1.00 -32.48 421.34 -7.92 -40.40 By element: Atomic # 1 Polarization: 10.42 SS G_CDS: -9.17 Total: 1.25 kcal Atomic # 6 Polarization: -7.50 SS G_CDS: -0.49 Total: -7.99 kcal Atomic # 7 Polarization: -46.25 SS G_CDS: 0.68 Total: -45.57 kcal Atomic # 8 Polarization: -10.48 SS G_CDS: -0.27 Total: -10.75 kcal Atomic # 14 Polarization: 21.33 SS G_CDS: -5.02 Total: 16.31 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -32.48 -7.92 -40.40 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000151011577.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.758 kcal (2) G-P(sol) polarization free energy of solvation -32.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.401 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds