Wall clock time and date at job start Tue Mar 31 2020 20:11:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52991 * 109.47345 * 2 1 4 4 H 1.09003 * 109.49913 * 55.06358 * 3 2 1 5 5 C 1.53186 * 109.50023 * 294.99911 * 3 2 1 6 6 N 1.46923 * 108.77662 * 294.68659 * 5 3 2 7 7 C 1.34775 * 120.63464 * 126.36798 * 6 5 3 8 8 O 1.21608 * 120.00027 * 354.48162 * 7 6 5 9 9 C 1.47102 * 120.00118 * 174.48491 * 7 6 5 10 10 C 1.32996 * 119.99969 * 173.30701 * 9 7 6 11 11 C 1.50698 * 120.00059 * 352.13252 * 10 9 7 12 12 C 1.50700 * 119.99663 * 172.13178 * 10 9 7 13 13 C 1.46927 * 118.73654 * 306.38907 * 6 5 3 14 14 C 1.53190 * 108.77619 * 53.60653 * 13 6 5 15 15 C 1.53044 * 109.33826 * 305.35006 * 14 13 6 16 16 H 1.09000 * 109.45987 * 301.35488 * 15 14 13 17 17 N 1.46906 * 109.45780 * 181.40049 * 15 14 13 18 18 C 1.46903 * 110.99937 * 84.99956 * 17 15 14 19 19 C 1.50692 * 109.47157 * 179.97438 * 18 17 15 20 20 O 1.21300 * 120.00029 * 359.97438 * 19 18 17 21 21 N 1.34774 * 120.00428 * 180.02562 * 19 18 17 22 22 C 1.37092 * 120.00301 * 180.02562 * 21 19 18 23 23 H 1.08003 * 120.00189 * 359.97438 * 22 21 19 24 24 C 1.38954 * 119.99943 * 179.97438 * 22 21 19 25 25 N 1.31407 * 119.99988 * 359.97438 * 24 22 21 26 26 Si 1.86801 * 119.99811 * 180.02562 * 24 22 21 27 27 H 1.48499 * 109.47768 * 59.99958 * 26 24 22 28 28 H 1.48501 * 109.47102 * 180.02562 * 26 24 22 29 29 H 1.48503 * 109.47108 * 299.99387 * 26 24 22 30 30 H 1.09001 * 109.47123 * 59.99776 * 1 2 3 31 31 H 1.08999 * 109.47410 * 179.97438 * 1 2 3 32 32 H 1.09004 * 109.47351 * 300.00370 * 1 2 3 33 33 H 1.09000 * 109.46868 * 239.99628 * 2 1 3 34 34 H 1.08998 * 109.46622 * 120.00194 * 2 1 3 35 35 H 1.09001 * 109.59194 * 174.89359 * 5 3 2 36 36 H 1.09002 * 109.70203 * 54.53812 * 5 3 2 37 37 H 1.07999 * 119.99844 * 353.30687 * 9 7 6 38 38 H 1.09002 * 109.46879 * 83.67688 * 11 10 9 39 39 H 1.08996 * 109.46815 * 203.67189 * 11 10 9 40 40 H 1.08999 * 109.47295 * 323.68054 * 11 10 9 41 41 H 1.08994 * 109.47560 * 0.02562 * 12 10 9 42 42 H 1.09008 * 109.47185 * 120.00183 * 12 10 9 43 43 H 1.09006 * 109.47193 * 239.99884 * 12 10 9 44 44 H 1.09003 * 109.58647 * 293.82207 * 13 6 5 45 45 H 1.09003 * 109.58706 * 173.39522 * 13 6 5 46 46 H 1.09004 * 109.49790 * 65.31854 * 14 13 6 47 47 H 1.09001 * 109.49573 * 185.38292 * 14 13 6 48 48 H 1.00900 * 111.00165 * 321.04740 * 17 15 14 49 49 H 1.08996 * 109.47062 * 300.00178 * 18 17 15 50 50 H 1.08997 * 109.46985 * 60.00065 * 18 17 15 51 51 H 0.97001 * 119.99357 * 359.97438 * 21 19 18 52 52 H 0.96998 * 120.00209 * 179.97438 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6066 1.9816 0.8423 5 6 1.6352 2.1279 -1.3087 6 7 2.3303 1.4687 -2.4226 7 6 1.6400 0.9942 -3.4784 8 8 0.4242 1.0188 -3.4707 9 6 2.3572 0.4464 -4.6401 10 6 1.6806 -0.1423 -5.6222 11 6 0.2052 -0.4073 -5.4674 12 6 2.3895 -0.5442 -6.8899 13 6 3.7924 1.3361 -2.3635 14 6 4.1731 0.6595 -1.0429 15 6 3.5662 1.4446 0.1222 16 1 3.9309 2.4715 0.0973 17 7 3.9575 0.8172 1.3916 18 6 5.2727 1.2998 1.8339 19 6 5.6392 0.6362 3.1362 20 8 4.8794 -0.1600 3.6462 21 7 6.8108 0.9281 3.7350 22 6 7.1445 0.3240 4.9196 23 1 6.4684 -0.3855 5.3732 24 6 8.3527 0.6247 5.5366 25 7 9.1756 1.4877 4.9845 26 14 8.8077 -0.1990 7.1503 27 1 8.8597 -1.6705 6.9577 28 1 10.1368 0.2894 7.5979 29 1 7.7881 0.1299 8.1787 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3634 0.5139 0.8900 33 1 1.8933 -0.5139 -0.8900 34 1 1.8932 -0.5139 0.8900 35 1 1.9179 3.1800 -1.2729 36 1 0.5576 2.0438 -1.4495 37 1 3.4331 0.5222 -4.6954 38 1 -0.3547 0.4895 -5.7325 39 1 -0.0877 -1.2260 -6.1247 40 1 -0.0089 -0.6770 -4.4333 41 1 3.4432 -0.2746 -6.8182 42 1 2.2993 -1.6213 -7.0308 43 1 1.9389 -0.0279 -7.7376 44 1 4.2512 2.3237 -2.4136 45 1 4.1382 0.7274 -3.1990 46 1 3.7897 -0.3608 -1.0331 47 1 5.2584 0.6413 -0.9432 48 1 3.9483 -0.1889 1.3157 49 1 6.0210 1.0580 1.0792 50 1 5.2347 2.3799 1.9750 51 1 7.4182 1.5652 3.3274 52 1 10.0188 1.6978 5.4153 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001483610272.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:11:29 Heat of formation + Delta-G solvation = -61.420524 kcal Electronic energy + Delta-G solvation = -29954.561079 eV Core-core repulsion = 25953.965567 eV Total energy + Delta-G solvation = -4000.595512 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 337.215 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -40.73142 -38.85062 -37.97671 -35.76564 -35.02843 -34.11346 -33.74149 -31.29491 -30.89141 -29.86741 -28.31109 -28.00749 -26.63247 -24.78772 -23.98117 -23.35391 -22.36791 -21.11204 -19.32966 -18.77709 -18.18076 -17.87024 -17.60038 -16.09089 -15.90589 -15.67139 -15.25393 -14.98753 -14.78888 -14.61488 -14.45106 -14.24272 -13.94732 -13.86234 -13.82119 -13.58224 -13.23026 -12.76624 -12.71646 -12.66889 -12.51962 -12.40503 -12.08095 -11.99667 -11.86825 -11.79908 -11.62563 -11.54605 -11.44156 -11.25958 -11.02388 -10.61873 -10.48721 -10.44653 -10.24146 -10.19253 -9.67864 -9.50253 -9.43621 -8.70303 -8.44989 -8.02194 -7.95340 -6.42065 -3.82792 1.11009 2.86535 3.10915 3.19871 3.25473 3.30006 3.90802 4.08197 4.27012 4.31735 4.44440 4.54316 4.71868 4.81152 4.84815 4.95754 5.03712 5.08379 5.10786 5.14038 5.21065 5.24478 5.32979 5.35771 5.44005 5.47782 5.52236 5.54806 5.58208 5.59220 5.62181 5.75485 5.79097 5.88204 5.92032 5.92187 6.02483 6.14437 6.18438 6.21714 6.26739 6.27920 6.31984 6.46097 6.52834 7.24933 7.28969 7.54704 7.66922 8.05998 8.07966 8.61155 9.17669 9.54131 10.05821 10.75608 Molecular weight = 337.22amu Principal moments of inertia in cm(-1) A = 0.022070 B = 0.002084 C = 0.001996 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1268.403242 B =13432.528546 C =14023.543408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.114 4.114 3 C -0.088 4.088 4 H 0.090 0.910 5 C 0.113 3.887 6 N -0.605 5.605 7 C 0.548 3.452 8 O -0.542 6.542 9 C -0.239 4.239 10 C -0.033 4.033 11 C -0.123 4.123 12 C -0.127 4.127 13 C 0.112 3.888 14 C -0.171 4.171 15 C 0.094 3.906 16 H 0.078 0.922 17 N -0.660 5.660 18 C 0.051 3.949 19 C 0.440 3.560 20 O -0.583 6.583 21 N -0.564 5.564 22 C -0.299 4.299 23 H 0.102 0.898 24 C 0.022 3.978 25 N -0.902 5.902 26 Si 0.931 3.069 27 H -0.274 1.274 28 H -0.285 1.285 29 H -0.273 1.273 30 H 0.058 0.942 31 H 0.047 0.953 32 H 0.052 0.948 33 H 0.055 0.945 34 H 0.072 0.928 35 H 0.064 0.936 36 H 0.097 0.903 37 H 0.127 0.873 38 H 0.078 0.922 39 H 0.053 0.947 40 H 0.088 0.912 41 H 0.067 0.933 42 H 0.075 0.925 43 H 0.077 0.923 44 H 0.069 0.931 45 H 0.085 0.915 46 H 0.074 0.926 47 H 0.075 0.925 48 H 0.350 0.650 49 H 0.042 0.958 50 H 0.085 0.915 51 H 0.392 0.608 52 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.193 0.734 -23.184 25.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.152 4.152 3 C -0.107 4.107 4 H 0.108 0.892 5 C -0.010 4.010 6 N -0.338 5.338 7 C 0.340 3.660 8 O -0.423 6.423 9 C -0.260 4.260 10 C -0.035 4.035 11 C -0.179 4.179 12 C -0.184 4.184 13 C -0.011 4.011 14 C -0.210 4.210 15 C -0.017 4.017 16 H 0.096 0.904 17 N -0.291 5.291 18 C -0.082 4.082 19 C 0.226 3.774 20 O -0.467 6.467 21 N -0.201 5.201 22 C -0.429 4.429 23 H 0.120 0.880 24 C -0.180 4.180 25 N -0.544 5.544 26 Si 0.758 3.242 27 H -0.199 1.199 28 H -0.210 1.210 29 H -0.199 1.199 30 H 0.077 0.923 31 H 0.066 0.934 32 H 0.071 0.929 33 H 0.074 0.926 34 H 0.090 0.910 35 H 0.082 0.918 36 H 0.115 0.885 37 H 0.145 0.855 38 H 0.097 0.903 39 H 0.072 0.928 40 H 0.106 0.894 41 H 0.086 0.914 42 H 0.093 0.907 43 H 0.096 0.904 44 H 0.087 0.913 45 H 0.103 0.897 46 H 0.092 0.908 47 H 0.094 0.906 48 H 0.170 0.830 49 H 0.060 0.940 50 H 0.103 0.897 51 H 0.225 0.775 52 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -12.482 0.731 -22.329 25.591 hybrid contribution 1.685 -0.358 0.014 1.722 sum -10.797 0.374 -22.315 24.792 Atomic orbital electron populations 1.21816 0.96099 1.01325 1.01756 1.21491 0.95698 0.96056 1.01941 1.21527 0.94964 0.97417 0.96830 0.89190 1.21758 0.98997 0.95294 0.84912 1.47942 1.07379 1.58598 1.19839 1.18507 0.87025 0.77879 0.82576 1.90738 1.13588 1.56750 1.81184 1.22512 1.00084 1.07294 0.96073 1.22579 0.96726 0.90591 0.93609 1.21094 0.91443 1.01572 1.03751 1.21018 1.00239 1.02250 0.94858 1.21724 0.79924 1.01068 0.98432 1.22766 1.01560 1.01094 0.95622 1.21580 0.94748 0.98239 0.87154 0.90418 1.60187 1.28266 1.12599 1.28078 1.21703 0.90102 1.00432 0.95966 1.19834 0.83481 0.86660 0.87455 1.90528 1.51197 1.38255 1.66738 1.41857 1.16747 1.39873 1.21592 1.19650 1.02841 1.22351 0.98045 0.88001 1.25260 0.95829 0.97041 0.99836 1.69599 1.10893 1.33704 1.40180 0.85918 0.77527 0.79348 0.81427 1.19930 1.20992 1.19884 0.92274 0.93357 0.92866 0.92601 0.90967 0.91761 0.88453 0.85509 0.90330 0.92790 0.89387 0.91414 0.90670 0.90394 0.91278 0.89666 0.90759 0.90620 0.83005 0.93981 0.89683 0.77493 0.91838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.76 9.68 37.16 0.36 -1.40 16 2 C -0.11 -1.36 4.67 -26.74 -0.12 -1.49 16 3 C -0.09 -0.98 2.38 -90.47 -0.22 -1.19 16 4 H 0.09 1.08 8.14 -51.93 -0.42 0.66 16 5 C 0.11 1.16 5.70 -3.72 -0.02 1.14 16 6 N -0.60 -6.01 2.33 -174.17 -0.41 -6.42 16 7 C 0.55 6.12 7.47 -12.67 -0.09 6.02 16 8 O -0.54 -7.38 12.74 5.27 0.07 -7.31 16 9 C -0.24 -2.10 8.82 -37.80 -0.33 -2.43 16 10 C -0.03 -0.27 6.10 -101.17 -0.62 -0.88 16 11 C -0.12 -1.07 8.45 36.00 0.30 -0.77 16 12 C -0.13 -0.66 10.09 36.01 0.36 -0.30 16 13 C 0.11 0.91 6.30 -3.71 -0.02 0.89 16 14 C -0.17 -1.66 4.99 -26.61 -0.13 -1.79 16 15 C 0.09 1.08 2.13 -67.63 -0.14 0.93 16 16 H 0.08 0.87 7.80 -51.93 -0.40 0.46 16 17 N -0.66 -10.16 5.42 -107.91 -0.59 -10.74 16 18 C 0.05 0.86 5.96 -4.98 -0.03 0.83 16 19 C 0.44 10.26 7.82 -10.99 -0.09 10.18 16 20 O -0.58 -15.76 15.78 5.54 0.09 -15.67 16 21 N -0.56 -14.18 5.29 -10.96 -0.06 -14.24 16 22 C -0.30 -8.33 9.68 -14.93 -0.14 -8.47 16 23 H 0.10 2.98 7.16 -52.48 -0.38 2.60 16 24 C 0.02 0.59 5.50 -17.47 -0.10 0.49 16 25 N -0.90 -24.43 13.05 55.50 0.72 -23.70 16 26 Si 0.93 21.04 29.55 -169.99 -5.02 16.02 16 27 H -0.27 -6.15 7.11 56.52 0.40 -5.74 16 28 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 29 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 30 H 0.06 0.71 6.46 -51.93 -0.34 0.37 16 31 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 32 H 0.05 0.60 8.14 -51.93 -0.42 0.17 16 33 H 0.06 0.68 6.12 -51.93 -0.32 0.36 16 34 H 0.07 0.98 7.01 -51.93 -0.36 0.62 16 35 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 36 H 0.10 1.11 5.20 -51.93 -0.27 0.84 16 37 H 0.13 0.86 5.93 -52.49 -0.31 0.55 16 38 H 0.08 0.74 7.98 -51.93 -0.41 0.32 16 39 H 0.05 0.37 8.09 -51.93 -0.42 -0.05 16 40 H 0.09 0.96 6.27 -51.93 -0.33 0.64 16 41 H 0.07 0.30 7.82 -51.93 -0.41 -0.11 16 42 H 0.07 0.33 8.14 -51.92 -0.42 -0.09 16 43 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 44 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 45 H 0.09 0.57 5.46 -51.93 -0.28 0.29 16 46 H 0.07 0.79 6.45 -51.93 -0.33 0.45 16 47 H 0.08 0.73 7.43 -51.93 -0.39 0.34 16 48 H 0.35 5.71 7.34 -39.29 -0.29 5.42 16 49 H 0.04 0.63 7.41 -51.93 -0.38 0.25 16 50 H 0.08 1.34 8.05 -51.93 -0.42 0.92 16 51 H 0.39 9.39 7.90 -40.82 -0.32 9.06 16 52 H 0.27 6.98 8.31 -40.82 -0.34 6.64 16 LS Contribution 402.43 15.07 6.06 6.06 Total: -1.00 -31.96 402.43 -8.62 -40.58 By element: Atomic # 1 Polarization: 22.12 SS G_CDS: -8.46 Total: 13.66 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -1.04 Total: 1.76 kcal Atomic # 7 Polarization: -54.77 SS G_CDS: -0.33 Total: -55.10 kcal Atomic # 8 Polarization: -23.14 SS G_CDS: 0.15 Total: -22.98 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -5.02 Total: 16.02 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -31.96 -8.62 -40.58 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001483610272.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.841 kcal (2) G-P(sol) polarization free energy of solvation -31.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds