Wall clock time and date at job start Tue Mar 31 2020 19:56:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46898 * 109.47095 * 2 1 4 4 C 1.47008 * 111.00194 * 46.36908 * 3 2 1 5 5 C 1.53097 * 109.26142 * 182.39082 * 4 3 2 6 6 O 1.43019 * 109.25817 * 303.14993 * 5 4 3 7 7 C 1.43016 * 113.73669 * 58.67095 * 6 5 4 8 8 C 1.47016 * 110.99918 * 170.00435 * 3 2 1 9 9 H 1.09007 * 109.53881 * 297.56533 * 8 3 2 10 10 C 1.50700 * 109.50931 * 57.67025 * 8 3 2 11 11 O 1.21285 * 119.99524 * 26.47413 * 10 8 3 12 12 N 1.34773 * 120.00103 * 206.46955 * 10 8 3 13 13 C 1.44796 * 120.17936 * 174.97978 * 12 10 8 14 14 C 1.51510 * 112.22133 * 264.57483 * 13 12 10 15 15 C 1.51311 * 113.25567 * 285.36460 * 14 13 12 16 16 H 1.09003 * 111.32188 * 186.10677 * 15 14 13 17 17 C 1.54954 * 106.51177 * 307.64782 * 15 14 13 18 18 C 1.54231 * 104.26520 * 89.08354 * 17 15 14 19 19 C 1.50868 * 105.35667 * 11.61084 * 18 17 15 20 20 H 1.09002 * 106.52191 * 121.68584 * 19 18 17 21 21 C 1.49813 * 120.18326 * 355.00270 * 12 10 8 22 22 N 1.48065 * 109.90494 * 7.82514 * 19 18 17 23 23 C 1.36933 * 127.83710 * 155.12323 * 22 19 18 24 24 H 1.08002 * 120.00025 * 180.02562 * 23 22 19 25 25 C 1.38809 * 120.00441 * 0.02711 * 23 22 19 26 26 N 1.31619 * 119.99978 * 359.97438 * 25 23 22 27 27 Si 1.86807 * 120.00453 * 180.02562 * 25 23 22 28 28 H 1.48498 * 109.47039 * 59.99851 * 27 25 23 29 29 H 1.48501 * 109.47014 * 179.97438 * 27 25 23 30 30 H 1.48493 * 109.46880 * 299.99973 * 27 25 23 31 31 H 1.09001 * 109.46916 * 300.00035 * 1 2 3 32 32 H 1.09003 * 109.47517 * 59.99283 * 1 2 3 33 33 H 1.09002 * 109.47707 * 179.97438 * 1 2 3 34 34 H 1.09004 * 109.46718 * 240.00448 * 2 1 3 35 35 H 1.08993 * 109.47289 * 120.00211 * 2 1 3 36 36 H 1.09002 * 109.50655 * 62.45408 * 4 3 2 37 37 H 1.09003 * 109.54179 * 302.35251 * 4 3 2 38 38 H 1.08999 * 109.50855 * 183.21633 * 5 4 3 39 39 H 1.09001 * 109.54451 * 63.10804 * 5 4 3 40 40 H 1.08994 * 109.50328 * 181.39941 * 7 6 5 41 41 H 1.08995 * 109.54548 * 61.28301 * 7 6 5 42 42 H 1.09003 * 108.92740 * 25.27725 * 13 12 10 43 43 H 1.08994 * 108.92801 * 143.86952 * 13 12 10 44 44 H 1.09002 * 108.73197 * 46.34470 * 14 13 12 45 45 H 1.09005 * 108.72441 * 164.51709 * 14 13 12 46 46 H 1.09006 * 110.50331 * 330.40235 * 17 15 14 47 47 H 1.09001 * 110.50994 * 207.77727 * 17 15 14 48 48 H 1.09001 * 110.28414 * 252.61202 * 18 17 15 49 49 H 1.08996 * 110.28599 * 130.60936 * 18 17 15 50 50 H 1.09001 * 109.54570 * 30.80655 * 21 12 10 51 51 H 1.09004 * 109.54792 * 270.53128 * 21 12 10 52 52 H 0.97005 * 120.00304 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0196 1.3850 0.0000 4 6 1.3024 2.1974 0.9934 5 6 1.8009 3.6430 0.9184 6 8 3.2165 3.6649 1.1213 7 6 3.9464 2.8844 0.1709 8 6 3.4696 1.4311 0.2382 9 1 3.6904 1.0209 1.2237 10 6 4.1788 0.6195 -0.8150 11 8 3.6695 0.4625 -1.9045 12 7 5.3789 0.0682 -0.5463 13 6 6.0138 -0.8012 -1.5147 14 6 5.7326 -2.2647 -1.2420 15 6 6.5113 -2.8138 -0.0666 16 1 6.3686 -3.8896 0.0357 17 6 7.9991 -2.4642 -0.3220 18 6 8.1780 -1.0728 0.3189 19 6 6.9279 -0.8435 1.1317 20 1 7.2519 -0.6810 2.1596 21 6 6.0631 0.3510 0.7561 22 7 6.1135 -2.0797 1.1634 23 6 5.2014 -2.4606 2.1111 24 1 4.6745 -3.3977 2.0076 25 6 4.9539 -1.6424 3.2047 26 7 5.5964 -0.5007 3.3312 27 14 3.7102 -2.1624 4.4980 28 1 4.1340 -3.4509 5.1025 29 1 3.6312 -1.1225 5.5551 30 1 2.3773 -2.3275 3.8646 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 -0.3634 -1.0276 -0.0005 34 1 1.8932 -0.5138 -0.8901 35 1 1.8933 -0.5138 0.8899 36 1 1.4879 1.7997 1.9911 37 1 0.2331 2.1697 0.7835 38 1 1.3132 4.2367 1.6915 39 1 1.5672 4.0589 -0.0616 40 1 5.0103 2.9295 0.4034 41 1 3.7759 3.2773 -0.8314 42 1 5.6464 -0.5499 -2.5098 43 1 7.0908 -0.6365 -1.4851 44 1 4.6676 -2.3855 -1.0434 45 1 5.9898 -2.8419 -2.1302 46 1 8.2026 -2.4196 -1.3920 47 1 8.6509 -3.1925 0.1605 48 1 8.2714 -0.3099 -0.4540 49 1 9.0557 -1.0645 0.9651 50 1 5.3158 0.5185 1.5317 51 1 6.6897 1.2371 0.6540 52 1 5.4238 0.0710 4.0957 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001045805344.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 19:56:48 Heat of formation + Delta-G solvation = -15.243841 kcal Electronic energy + Delta-G solvation = -33657.058432 eV Core-core repulsion = 29658.465291 eV Total energy + Delta-G solvation = -3998.593141 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 337.215 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -40.38670 -39.25414 -37.69865 -35.84198 -33.97189 -33.33337 -31.83987 -31.19818 -30.46782 -29.54094 -27.37678 -26.51427 -25.90036 -24.38952 -23.88687 -22.29806 -21.72750 -20.37748 -19.67462 -19.18974 -18.23562 -17.28802 -16.42558 -16.13841 -16.10225 -15.35816 -15.02832 -15.00368 -14.85424 -14.56015 -14.35322 -14.03443 -13.85257 -13.51977 -13.09647 -12.88647 -12.68708 -12.59577 -12.36260 -11.93266 -11.82982 -11.67247 -11.49913 -11.33314 -11.27481 -11.19061 -11.16008 -10.91851 -10.86981 -10.83417 -10.66254 -10.38771 -10.27973 -10.01496 -9.75911 -9.64674 -9.57894 -9.38188 -9.00424 -8.69616 -8.01557 -7.77296 -6.98247 -5.82726 -3.19746 3.17325 3.29924 3.36059 3.36926 3.62057 3.93462 4.20730 4.36594 4.98335 5.04311 5.17623 5.22238 5.27113 5.30431 5.32450 5.43614 5.47148 5.49047 5.56669 5.59475 5.65485 5.65613 5.72181 5.74805 5.88637 5.90028 5.94942 6.01274 6.09046 6.12962 6.16049 6.25529 6.26687 6.34227 6.39717 6.41002 6.49178 6.63064 6.65954 6.77242 6.82684 7.03903 7.10790 7.22046 7.24865 7.32374 7.38509 7.54772 7.66445 8.13391 8.18484 8.89733 9.06056 9.64811 10.39124 11.23673 Molecular weight = 337.22amu Principal moments of inertia in cm(-1) A = 0.010250 B = 0.006217 C = 0.005066 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2731.180265 B = 4502.466116 C = 5525.228768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.046 3.954 3 N -0.513 5.513 4 C 0.012 3.988 5 C 0.063 3.937 6 O -0.379 6.379 7 C 0.082 3.918 8 C 0.030 3.970 9 H 0.088 0.912 10 C 0.524 3.476 11 O -0.550 6.550 12 N -0.589 5.589 13 C 0.116 3.884 14 C -0.145 4.145 15 C 0.150 3.850 16 H 0.061 0.939 17 C -0.131 4.131 18 C -0.124 4.124 19 C 0.142 3.858 20 H 0.104 0.896 21 C 0.110 3.890 22 N -0.579 5.579 23 C -0.200 4.200 24 H 0.077 0.923 25 C -0.012 4.012 26 N -0.924 5.924 27 Si 0.907 3.093 28 H -0.285 1.285 29 H -0.289 1.289 30 H -0.288 1.288 31 H 0.053 0.947 32 H 0.061 0.939 33 H 0.058 0.942 34 H 0.087 0.913 35 H 0.038 0.962 36 H 0.043 0.957 37 H 0.091 0.909 38 H 0.096 0.904 39 H 0.058 0.942 40 H 0.101 0.899 41 H 0.060 0.940 42 H 0.066 0.934 43 H 0.076 0.924 44 H 0.056 0.944 45 H 0.052 0.948 46 H 0.060 0.940 47 H 0.057 0.943 48 H 0.059 0.941 49 H 0.059 0.941 50 H 0.124 0.876 51 H 0.035 0.965 52 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.539 4.288 -5.645 7.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.081 4.081 3 N -0.240 5.240 4 C -0.116 4.116 5 C -0.014 4.014 6 O -0.297 6.297 7 C 0.004 3.996 8 C -0.082 4.082 9 H 0.105 0.895 10 C 0.310 3.690 11 O -0.428 6.428 12 N -0.321 5.321 13 C -0.008 4.008 14 C -0.185 4.185 15 C 0.042 3.958 16 H 0.079 0.921 17 C -0.169 4.169 18 C -0.162 4.162 19 C 0.035 3.965 20 H 0.121 0.879 21 C -0.012 4.012 22 N -0.302 5.302 23 C -0.328 4.328 24 H 0.095 0.905 25 C -0.207 4.207 26 N -0.574 5.574 27 Si 0.738 3.262 28 H -0.212 1.212 29 H -0.215 1.215 30 H -0.215 1.215 31 H 0.072 0.928 32 H 0.080 0.920 33 H 0.077 0.923 34 H 0.105 0.895 35 H 0.057 0.943 36 H 0.062 0.938 37 H 0.109 0.891 38 H 0.114 0.886 39 H 0.076 0.924 40 H 0.119 0.881 41 H 0.078 0.922 42 H 0.084 0.916 43 H 0.094 0.906 44 H 0.075 0.925 45 H 0.071 0.929 46 H 0.079 0.921 47 H 0.076 0.924 48 H 0.077 0.923 49 H 0.078 0.922 50 H 0.142 0.858 51 H 0.053 0.947 52 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -1.909 4.546 -6.250 7.961 hybrid contribution -0.671 -0.905 1.367 1.772 sum -2.580 3.641 -4.883 6.614 Atomic orbital electron populations 1.21881 0.95313 1.01713 1.01771 1.22183 0.95220 0.88536 1.02189 1.62095 1.01901 1.11987 1.47971 1.22906 0.99673 0.94493 0.94552 1.22679 0.81692 0.95397 1.01647 1.88006 1.18008 1.69549 1.54112 1.22481 0.96342 0.87690 0.93080 1.22358 0.89164 0.97388 0.99252 0.89483 1.19975 0.81220 0.79967 0.87819 1.90598 1.65822 1.62186 1.24236 1.48479 1.18868 1.45463 1.19286 1.20797 0.98021 0.89906 0.92029 1.21947 1.01921 0.95978 0.98697 1.21208 0.91572 0.95536 0.87441 0.92109 1.22711 0.97940 0.97127 0.99171 1.21942 0.98733 0.96641 0.98857 1.20512 0.88329 0.86329 1.01316 0.87860 1.23536 0.97982 0.96753 0.82923 1.44965 1.46188 1.17957 1.21064 1.18986 1.12797 1.02726 0.98278 0.90484 1.24621 1.00417 0.96988 0.98645 1.69665 1.44995 1.12026 1.30733 0.86245 0.80892 0.77591 0.81445 1.21203 1.21472 1.21482 0.92789 0.91998 0.92292 0.89463 0.94334 0.93828 0.89068 0.88637 0.92403 0.88077 0.92154 0.91597 0.90571 0.92535 0.92912 0.92110 0.92432 0.92275 0.92216 0.85817 0.94673 0.93498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.11 9.18 37.16 0.34 -1.77 16 2 C 0.05 0.83 5.37 -3.83 -0.02 0.81 16 3 N -0.51 -9.04 4.42 -227.73 -1.01 -10.05 16 4 C 0.01 0.18 4.94 -3.72 -0.02 0.16 16 5 C 0.06 0.86 7.01 37.21 0.26 1.12 16 6 O -0.38 -6.22 10.83 -35.23 -0.38 -6.61 16 7 C 0.08 1.36 6.25 37.21 0.23 1.60 16 8 C 0.03 0.57 1.64 -68.75 -0.11 0.45 16 9 H 0.09 1.89 6.16 -51.92 -0.32 1.57 16 10 C 0.52 10.64 6.02 -10.99 -0.07 10.58 16 11 O -0.55 -12.28 14.71 5.55 0.08 -12.20 16 12 N -0.59 -11.51 2.87 -173.66 -0.50 -12.01 16 13 C 0.12 2.08 5.18 -5.71 -0.03 2.05 16 14 C -0.14 -2.63 5.02 -28.34 -0.14 -2.77 16 15 C 0.15 2.86 4.08 -66.56 -0.27 2.58 16 16 H 0.06 1.16 8.14 -51.93 -0.42 0.73 16 17 C -0.13 -2.09 6.03 -25.06 -0.15 -2.25 16 18 C -0.12 -2.09 5.78 -27.16 -0.16 -2.25 16 19 C 0.14 2.94 1.97 -68.56 -0.13 2.81 16 20 H 0.10 2.50 6.08 -51.93 -0.32 2.18 16 21 C 0.11 2.21 5.14 -2.61 -0.01 2.20 16 22 N -0.58 -13.08 2.69 -156.81 -0.42 -13.50 16 23 C -0.20 -5.05 10.40 -15.06 -0.16 -5.21 16 24 H 0.08 1.95 7.83 -52.49 -0.41 1.54 16 25 C -0.01 -0.31 5.47 -17.43 -0.10 -0.41 16 26 N -0.92 -23.50 8.13 55.49 0.45 -23.05 16 27 Si 0.91 20.93 29.55 -169.99 -5.02 15.91 16 28 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 29 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 30 H -0.29 -6.70 7.11 56.52 0.40 -6.30 16 31 H 0.05 0.69 6.28 -51.93 -0.33 0.37 16 32 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 33 H 0.06 0.78 8.14 -51.93 -0.42 0.35 16 34 H 0.09 1.76 6.49 -51.93 -0.34 1.42 16 35 H 0.04 0.78 8.08 -51.93 -0.42 0.36 16 36 H 0.04 0.71 8.14 -51.93 -0.42 0.28 16 37 H 0.09 1.15 6.05 -51.93 -0.31 0.83 16 38 H 0.10 1.05 8.14 -51.93 -0.42 0.63 16 39 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 40 H 0.10 1.61 7.73 -51.93 -0.40 1.21 16 41 H 0.06 0.99 8.14 -51.93 -0.42 0.56 16 42 H 0.07 1.21 7.17 -51.93 -0.37 0.83 16 43 H 0.08 1.25 3.93 -51.93 -0.20 1.04 16 44 H 0.06 1.20 8.14 -51.93 -0.42 0.77 16 45 H 0.05 0.83 8.14 -51.93 -0.42 0.40 16 46 H 0.06 0.84 7.39 -51.93 -0.38 0.46 16 47 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 48 H 0.06 0.91 6.15 -51.93 -0.32 0.59 16 49 H 0.06 0.97 8.14 -51.93 -0.42 0.54 16 50 H 0.12 2.83 3.72 -51.93 -0.19 2.64 16 51 H 0.04 0.65 8.13 -51.93 -0.42 0.22 16 52 H 0.25 6.49 8.31 -40.82 -0.34 6.15 16 LS Contribution 373.03 15.07 5.62 5.62 Total: -1.00 -27.91 373.03 -10.24 -38.15 By element: Atomic # 1 Polarization: 16.55 SS G_CDS: -8.52 Total: 8.03 kcal Atomic # 6 Polarization: 10.24 SS G_CDS: -0.53 Total: 9.70 kcal Atomic # 7 Polarization: -57.13 SS G_CDS: -1.47 Total: -58.61 kcal Atomic # 8 Polarization: -18.50 SS G_CDS: -0.30 Total: -18.80 kcal Atomic # 14 Polarization: 20.93 SS G_CDS: -5.02 Total: 15.91 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -27.91 -10.24 -38.15 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001045805344.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.903 kcal (2) G-P(sol) polarization free energy of solvation -27.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.147 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds