Wall clock time and date at job start Tue Mar 31 2020 20:15:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.50705 * 110.53366 * 2 1 4 4 C 1.38240 * 119.98884 * 266.89403 * 3 2 1 5 5 C 1.38214 * 120.01011 * 179.77020 * 4 3 2 6 6 C 1.38322 * 119.99029 * 0.50645 * 5 4 3 7 7 Br 1.89097 * 120.01345 * 179.77097 * 6 5 4 8 8 C 1.38329 * 119.97920 * 359.74790 * 6 5 4 9 9 C 1.38220 * 119.99037 * 359.97438 * 8 6 5 10 10 N 1.47304 * 110.59965 * 122.99578 * 2 1 3 11 11 C 1.34529 * 106.61953 * 118.52541 * 10 2 1 12 12 O 1.21528 * 123.77016 * 180.26765 * 11 10 2 13 13 N 1.33790 * 112.45599 * 0.02562 * 11 10 2 14 14 C 1.37513 * 124.17757 * 179.97438 * 13 11 10 15 15 H 1.08003 * 119.99771 * 327.09556 * 14 13 11 16 16 C 1.38890 * 119.99957 * 147.08796 * 14 13 11 17 17 N 1.31381 * 120.00055 * 340.13219 * 16 14 13 18 18 Si 1.86804 * 120.00040 * 160.13707 * 16 14 13 19 19 H 1.48492 * 109.47115 * 59.99990 * 18 16 14 20 20 H 1.48507 * 109.47144 * 180.02562 * 18 16 14 21 21 H 1.48499 * 109.47024 * 299.99796 * 18 16 14 22 22 C 1.34765 * 111.64745 * 359.97438 * 13 11 10 23 23 O 1.21233 * 127.16126 * 180.02562 * 22 13 11 24 24 H 1.08996 * 109.47083 * 182.13239 * 1 2 3 25 25 H 1.08997 * 109.46988 * 302.12947 * 1 2 3 26 26 H 1.09005 * 109.47115 * 62.12678 * 1 2 3 27 27 H 1.08002 * 119.99489 * 0.02562 * 4 3 2 28 28 H 1.08002 * 120.00898 * 180.23120 * 5 4 3 29 29 H 1.08002 * 120.00725 * 180.02562 * 8 6 5 30 30 H 1.07996 * 119.99602 * 179.97438 * 9 8 6 31 31 H 0.97005 * 126.69452 * 298.56573 * 10 2 1 32 32 H 0.97004 * 120.00445 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0586 1.4113 0.0000 4 6 2.3617 2.0356 -1.1956 5 6 2.8421 3.3316 -1.1963 6 6 3.0294 4.0003 -0.0001 7 35 3.6926 5.7711 0.0000 8 6 2.7309 3.3733 1.1963 9 6 2.2452 2.0793 1.1959 10 7 2.0483 -0.7509 1.1565 11 6 2.7599 -1.7790 0.6601 12 8 3.3248 -2.6049 1.3498 13 7 2.7719 -1.7935 -0.6777 14 6 3.4262 -2.7373 -1.4341 15 1 4.3461 -3.1744 -1.0747 16 6 2.9039 -3.1285 -2.6602 17 7 1.6354 -2.9194 -2.9307 18 14 4.0051 -3.9520 -3.9246 19 1 4.5612 -5.2056 -3.3551 20 1 3.2126 -4.2687 -5.1399 21 1 5.1171 -3.0358 -4.2842 22 6 2.0636 -0.7690 -1.1923 23 8 1.8892 -0.5154 -2.3649 24 1 -0.3633 -1.0269 0.0382 25 1 -0.3633 0.5465 0.8703 26 1 -0.3633 0.4805 -0.9085 27 1 2.2193 1.5120 -2.1294 28 1 3.0753 3.8206 -2.1306 29 1 2.8766 3.8951 2.1306 30 1 2.0125 1.5896 2.1299 31 1 1.9041 -0.5447 2.0933 32 1 1.2706 -3.1923 -3.7871 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000016286746.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:15:45 Heat of formation + Delta-G solvation = -2.830287 kcal Electronic energy + Delta-G solvation = -21474.032182 eV Core-core repulsion = 18061.207773 eV Total energy + Delta-G solvation = -3412.824410 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.56949 -39.09830 -37.18493 -35.50237 -34.35039 -32.41882 -31.57124 -31.04942 -30.18858 -28.45525 -25.90179 -24.00930 -22.86596 -22.12796 -20.79227 -20.00988 -17.71133 -16.99135 -16.27766 -15.77180 -15.52519 -15.23150 -14.65608 -14.44700 -14.18090 -13.86364 -13.64442 -13.48890 -13.32928 -12.70948 -12.50772 -12.05011 -11.99554 -11.66003 -11.37041 -11.22234 -11.05338 -10.85412 -10.78678 -10.46072 -10.36349 -9.70849 -9.35763 -9.02013 -8.93233 -8.85734 -8.52376 -7.99975 -6.47978 -4.24024 1.02540 1.32381 1.54898 2.84811 3.19537 3.23820 3.25570 3.43448 3.62169 4.09422 4.32087 4.38198 4.63785 4.77862 4.90172 5.03945 5.19340 5.28968 5.41948 5.46715 5.64579 5.81707 5.91827 5.99553 6.14705 6.24091 6.35054 6.49453 6.60679 6.82451 7.39023 7.52914 7.89305 8.12135 8.65546 8.94551 9.13065 9.70949 10.61639 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.018840 B = 0.003700 C = 0.003413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1485.845864 B = 7565.211814 C = 8200.827694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.154 3.846 3 C -0.058 4.058 4 C -0.098 4.098 5 C -0.089 4.089 6 C -0.091 4.091 7 Br -0.061 7.061 8 C -0.095 4.095 9 C -0.098 4.098 10 N -0.737 5.737 11 C 0.679 3.321 12 O -0.567 6.567 13 N -0.403 5.403 14 C -0.354 4.354 15 H 0.104 0.896 16 C 0.059 3.941 17 N -0.827 5.827 18 Si 0.931 3.069 19 H -0.271 1.271 20 H -0.282 1.282 21 H -0.270 1.270 22 C 0.503 3.497 23 O -0.457 6.457 24 H 0.072 0.928 25 H 0.064 0.936 26 H 0.078 0.922 27 H 0.156 0.844 28 H 0.134 0.866 29 H 0.132 0.868 30 H 0.129 0.871 31 H 0.421 0.579 32 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.388 16.580 5.680 17.581 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C 0.062 3.938 3 C -0.060 4.060 4 C -0.117 4.117 5 C -0.109 4.109 6 C -0.170 4.170 7 Br 0.024 6.976 8 C -0.115 4.115 9 C -0.117 4.117 10 N -0.402 5.402 11 C 0.383 3.617 12 O -0.444 6.444 13 N -0.134 5.134 14 C -0.479 4.479 15 H 0.121 0.879 16 C -0.152 4.152 17 N -0.459 5.459 18 Si 0.756 3.244 19 H -0.196 1.196 20 H -0.207 1.207 21 H -0.195 1.195 22 C 0.289 3.711 23 O -0.328 6.328 24 H 0.091 0.909 25 H 0.083 0.917 26 H 0.097 0.903 27 H 0.174 0.826 28 H 0.152 0.848 29 H 0.150 0.850 30 H 0.147 0.853 31 H 0.264 0.736 32 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -1.034 16.810 5.158 17.614 hybrid contribution 0.107 -0.673 -0.058 0.683 sum -0.927 16.138 5.100 16.950 Atomic orbital electron populations 1.21875 0.90629 1.03673 1.03036 1.20237 0.96323 0.89325 0.87880 1.19781 0.98124 0.94207 0.93887 1.21635 0.96254 0.94069 0.99749 1.21119 0.98432 0.94562 0.96738 1.21786 1.06527 0.92150 0.96547 1.96671 1.86339 1.15276 1.99333 1.20986 0.98936 0.94891 0.96652 1.20856 0.99309 0.93808 0.97718 1.45619 1.56682 1.30313 1.07595 1.16405 0.80047 0.81567 0.83721 1.90825 1.49909 1.41675 1.62013 1.41781 1.43855 1.23506 1.04279 1.19331 1.06720 1.21123 1.00725 0.87877 1.25310 0.95340 0.95838 0.98739 1.69893 1.11450 1.41089 1.23460 0.85956 0.79836 0.79338 0.79269 1.19597 1.20694 1.19494 1.19814 0.81853 0.81102 0.88348 1.90550 1.57739 1.68196 1.16309 0.90865 0.91663 0.90327 0.82643 0.84850 0.85045 0.85296 0.73637 0.91571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.03 8.96 37.16 0.33 -1.70 16 2 C 0.15 2.74 1.16 -133.25 -0.15 2.58 16 3 C -0.06 -0.91 4.89 -104.62 -0.51 -1.42 16 4 C -0.10 -1.56 9.18 -39.59 -0.36 -1.92 16 5 C -0.09 -1.21 9.79 -39.56 -0.39 -1.60 16 6 C -0.09 -1.15 6.22 -39.52 -0.25 -1.39 16 7 Br -0.06 -0.67 33.70 -68.01 -2.29 -2.97 16 8 C -0.09 -1.13 9.79 -39.55 -0.39 -1.52 16 9 C -0.10 -1.25 9.35 -39.59 -0.37 -1.62 16 10 N -0.74 -13.15 5.37 -54.03 -0.29 -13.44 16 11 C 0.68 16.13 8.57 -88.02 -0.75 15.38 16 12 O -0.57 -15.01 17.62 5.34 0.09 -14.91 16 13 N -0.40 -10.40 2.69 -65.57 -0.18 -10.58 16 14 C -0.35 -9.82 9.46 -14.76 -0.14 -9.96 16 15 H 0.10 2.86 7.91 -52.48 -0.41 2.45 16 16 C 0.06 1.60 4.82 -17.50 -0.08 1.51 16 17 N -0.83 -22.91 11.19 55.49 0.62 -22.29 16 18 Si 0.93 20.80 29.60 -169.99 -5.03 15.77 16 19 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 20 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 21 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 22 C 0.50 11.79 5.72 -10.55 -0.06 11.73 16 23 O -0.46 -11.59 13.25 5.60 0.07 -11.52 16 24 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 25 H 0.06 0.77 8.14 -51.93 -0.42 0.34 16 26 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 27 H 0.16 2.78 5.60 -52.49 -0.29 2.48 16 28 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 29 H 0.13 1.26 8.06 -52.49 -0.42 0.84 16 30 H 0.13 1.34 7.12 -52.49 -0.37 0.97 16 31 H 0.42 5.89 8.20 -40.82 -0.33 5.56 16 32 H 0.27 7.19 8.31 -40.82 -0.34 6.86 16 LS Contribution 300.34 15.07 4.53 4.53 Total: -1.00 -31.68 300.34 -8.27 -39.95 By element: Atomic # 1 Polarization: 8.05 SS G_CDS: -2.67 Total: 5.38 kcal Atomic # 6 Polarization: 13.20 SS G_CDS: -3.13 Total: 10.08 kcal Atomic # 7 Polarization: -46.46 SS G_CDS: 0.15 Total: -46.30 kcal Atomic # 8 Polarization: -26.60 SS G_CDS: 0.17 Total: -26.43 kcal Atomic # 14 Polarization: 20.80 SS G_CDS: -5.03 Total: 15.77 kcal Atomic # 35 Polarization: -0.67 SS G_CDS: -2.29 Total: -2.97 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -31.68 -8.27 -39.95 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000016286746.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.115 kcal (2) G-P(sol) polarization free energy of solvation -31.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds