Wall clock time and date at job start Tue Mar 31 2020 20:11:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46503 * 109.47249 * 344.74043 * 3 2 1 5 5 C 1.37100 * 120.00034 * 263.95257 * 4 3 2 6 6 H 1.07994 * 119.99428 * 200.21905 * 5 4 3 7 7 C 1.38946 * 119.99853 * 20.21553 * 5 4 3 8 8 N 1.31413 * 120.00257 * 21.43190 * 7 5 4 9 9 Si 1.86796 * 119.99870 * 201.42811 * 7 5 4 10 10 H 1.48498 * 109.47341 * 89.99913 * 9 7 5 11 11 H 1.48504 * 109.47178 * 210.00569 * 9 7 5 12 12 H 1.48502 * 109.47297 * 330.00223 * 9 7 5 13 13 C 1.34780 * 119.99625 * 83.95103 * 4 3 2 14 14 O 1.21293 * 119.99655 * 180.02562 * 13 4 3 15 15 C 1.50693 * 120.00080 * 0.27197 * 13 4 3 16 16 O 1.42913 * 109.46847 * 179.72397 * 15 13 4 17 17 C 1.35900 * 116.99692 * 179.97438 * 16 15 13 18 18 C 1.38756 * 120.05048 * 359.73246 * 17 16 15 19 19 C 1.38136 * 119.95906 * 179.72545 * 18 17 16 20 20 C 1.38268 * 120.06698 * 0.56465 * 19 18 17 21 21 C 1.38337 * 120.10180 * 359.70754 * 20 19 18 22 22 Br 1.89099 * 119.98452 * 180.02562 * 21 20 19 23 23 C 1.38260 * 120.03284 * 359.97438 * 21 20 19 24 24 H 1.08999 * 109.47234 * 224.74008 * 3 2 1 25 25 H 1.09003 * 109.47142 * 104.74274 * 3 2 1 26 26 H 0.96998 * 120.00052 * 180.02562 * 8 7 5 27 27 H 1.08996 * 109.47479 * 299.72640 * 15 13 4 28 28 H 1.08998 * 109.47362 * 59.73074 * 15 13 4 29 29 H 1.08001 * 120.02284 * 0.02562 * 18 17 16 30 30 H 1.08003 * 119.96370 * 180.27300 * 19 18 17 31 31 H 1.07999 * 119.94899 * 179.72517 * 20 19 18 32 32 H 1.07995 * 120.03164 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.3317 0.3635 5 6 3.4435 -1.6040 1.6617 6 1 4.0932 -2.4377 1.8835 7 6 2.9589 -0.8074 2.6919 8 7 1.8759 -0.0856 2.5106 9 14 3.8470 -0.7626 4.3346 10 1 4.8687 0.3149 4.3159 11 1 2.8680 -0.4978 5.4195 12 1 4.5102 -2.0694 4.5747 13 6 3.2060 -2.2896 -0.5783 14 8 3.6104 -3.3928 -0.2773 15 6 2.8308 -1.9883 -2.0064 16 8 3.0379 -3.1525 -2.8090 17 6 2.7451 -3.0498 -4.1321 18 6 2.2628 -1.8546 -4.6462 19 6 1.9711 -1.7506 -5.9924 20 6 2.1481 -2.8396 -6.8258 21 6 2.6234 -4.0341 -6.3150 22 35 2.8648 -5.5212 -7.4579 23 6 2.9229 -4.1409 -4.9694 24 1 2.9710 0.7308 0.7234 25 1 2.9712 0.2623 -0.9939 26 1 1.5378 0.4708 3.2296 27 1 1.7815 -1.6970 -2.0527 28 1 3.4509 -1.1739 -2.3809 29 1 2.1202 -1.0047 -3.9952 30 1 1.5999 -0.8190 -6.3935 31 1 1.9152 -2.7574 -7.8771 32 1 3.2943 -5.0734 -4.5708 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000060859731.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:11:51 Heat of formation + Delta-G solvation = 1.794541 kcal Electronic energy + Delta-G solvation = -20205.099323 eV Core-core repulsion = 16792.475461 eV Total energy + Delta-G solvation = -3412.623862 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -40.29250 -38.89740 -37.31085 -35.85039 -34.44626 -32.36918 -32.08005 -30.76451 -29.15857 -28.30094 -27.46097 -24.68593 -22.83931 -22.07830 -19.53715 -18.33832 -18.06409 -16.74913 -16.43252 -16.19666 -15.78638 -15.70551 -14.77609 -14.49272 -14.23328 -13.75248 -13.64029 -13.35898 -13.15062 -12.90618 -12.41834 -12.10920 -11.86340 -11.78966 -11.49124 -11.33163 -11.21299 -11.05234 -10.75480 -10.65137 -10.48901 -10.47621 -10.44121 -9.38992 -8.98637 -8.75717 -8.32703 -8.18285 -6.62674 -4.14608 0.91852 1.23238 1.39300 2.96258 3.02725 3.17925 3.24359 3.40707 3.48628 3.67055 3.81661 4.03883 4.56131 4.67252 4.76311 4.86931 4.94044 4.99478 5.03984 5.22653 5.27040 5.29551 5.48631 5.66485 5.88107 5.97989 6.12521 6.18274 6.30317 6.39753 7.31381 7.36712 7.75416 8.13903 8.58561 8.84606 9.02639 9.53938 10.43612 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.028510 B = 0.002536 C = 0.002378 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 981.880538 B =11036.932270 C =11772.593777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.463 5.463 2 C 0.239 3.761 3 C 0.218 3.782 4 N -0.436 5.436 5 C -0.316 4.316 6 H 0.111 0.889 7 C 0.035 3.965 8 N -0.874 5.874 9 Si 0.931 3.069 10 H -0.274 1.274 11 H -0.285 1.285 12 H -0.267 1.267 13 C 0.456 3.544 14 O -0.548 6.548 15 C 0.045 3.955 16 O -0.280 6.280 17 C 0.146 3.854 18 C -0.198 4.198 19 C -0.072 4.072 20 C -0.138 4.138 21 C -0.051 4.051 22 Br -0.049 7.049 23 C -0.127 4.127 24 H 0.129 0.871 25 H 0.084 0.916 26 H 0.275 0.725 27 H 0.081 0.919 28 H 0.084 0.916 29 H 0.136 0.864 30 H 0.134 0.866 31 H 0.132 0.868 32 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.909 -0.682 -19.167 19.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.143 5.143 2 C -0.080 4.080 3 C 0.091 3.909 4 N -0.158 5.158 5 C -0.442 4.442 6 H 0.129 0.871 7 C -0.170 4.170 8 N -0.512 5.512 9 Si 0.757 3.243 10 H -0.200 1.200 11 H -0.210 1.210 12 H -0.192 1.192 13 C 0.243 3.757 14 O -0.428 6.428 15 C -0.034 4.034 16 O -0.191 6.191 17 C 0.098 3.902 18 C -0.217 4.217 19 C -0.091 4.091 20 C -0.158 4.158 21 C -0.131 4.131 22 Br 0.036 6.964 23 C -0.147 4.147 24 H 0.147 0.853 25 H 0.102 0.898 26 H 0.086 0.914 27 H 0.098 0.902 28 H 0.102 0.898 29 H 0.154 0.846 30 H 0.152 0.848 31 H 0.150 0.850 32 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.502 -1.861 -19.188 19.337 hybrid contribution 0.402 0.812 1.228 1.526 sum 1.904 -1.049 -17.961 18.092 Atomic orbital electron populations 1.80922 1.13477 1.07961 1.11977 1.29260 0.95339 0.93007 0.90363 1.18760 0.81773 0.89184 1.01206 1.43538 1.56819 1.07263 1.08227 1.19745 1.28043 1.16554 0.79906 0.87144 1.25332 0.94699 0.97006 0.99962 1.69834 1.17847 1.28527 1.34987 0.85836 0.78941 0.79178 0.80325 1.19995 1.21023 1.19178 1.19539 0.85220 0.85410 0.85503 1.90607 1.48759 1.21908 1.81515 1.22727 1.01807 0.87225 0.91662 1.86221 1.80738 1.36925 1.15225 1.19010 0.93741 0.93477 0.83991 1.21501 1.05184 0.97845 0.97146 1.20937 0.97285 0.98322 0.92544 1.20956 1.02572 0.91716 1.00538 1.21434 1.04714 0.93466 0.93461 1.96709 1.96315 1.39917 1.63414 1.20321 1.04539 0.99055 0.90791 0.85305 0.89828 0.91416 0.90156 0.89832 0.84595 0.84811 0.85042 0.83990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 44. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -10.42 18.54 42.15 0.78 -9.64 16 2 C 0.24 4.91 12.84 -20.76 -0.27 4.64 16 3 C 0.22 3.94 4.91 -6.83 -0.03 3.91 16 4 N -0.44 -9.66 2.60 -117.94 -0.31 -9.96 16 5 C -0.32 -7.81 9.27 -14.93 -0.14 -7.95 16 6 H 0.11 2.90 7.43 -52.49 -0.39 2.51 16 7 C 0.03 0.82 4.84 -17.47 -0.08 0.73 16 8 N -0.87 -21.15 9.58 55.50 0.53 -20.62 16 9 Si 0.93 18.90 29.60 -169.99 -5.03 13.87 16 10 H -0.27 -5.37 7.11 56.52 0.40 -4.96 16 11 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 12 H -0.27 -5.54 7.11 56.52 0.40 -5.14 16 13 C 0.46 10.11 7.64 -10.99 -0.08 10.03 16 14 O -0.55 -14.49 16.17 -14.36 -0.23 -14.72 16 15 C 0.04 0.75 3.83 36.00 0.14 0.89 16 16 O -0.28 -5.01 9.67 -39.33 -0.38 -5.39 16 17 C 0.15 2.14 6.69 -39.22 -0.26 1.88 16 18 C -0.20 -2.38 9.04 -39.43 -0.36 -2.74 16 19 C -0.07 -0.73 10.04 -39.61 -0.40 -1.12 16 20 C -0.14 -1.43 9.78 -39.53 -0.39 -1.81 16 21 C -0.05 -0.61 6.22 -39.54 -0.25 -0.85 16 22 Br -0.05 -0.51 33.70 -68.01 -2.29 -2.81 16 23 C -0.13 -1.73 9.73 -39.41 -0.38 -2.11 16 24 H 0.13 2.36 6.63 -51.93 -0.34 2.02 16 25 H 0.08 1.07 6.68 -51.93 -0.35 0.72 16 26 H 0.28 6.47 8.31 -40.82 -0.34 6.13 16 27 H 0.08 1.28 7.02 -51.93 -0.36 0.91 16 28 H 0.08 1.08 6.94 -51.93 -0.36 0.72 16 29 H 0.14 1.42 6.30 -52.49 -0.33 1.09 16 30 H 0.13 0.96 8.06 -52.48 -0.42 0.54 16 31 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 32 H 0.14 1.92 8.06 -52.49 -0.42 1.49 16 LS Contribution 309.48 15.07 4.66 4.66 Total: -1.00 -30.61 309.48 -7.31 -37.91 By element: Atomic # 1 Polarization: 3.76 SS G_CDS: -2.54 Total: 1.22 kcal Atomic # 6 Polarization: 7.98 SS G_CDS: -2.50 Total: 5.48 kcal Atomic # 7 Polarization: -41.23 SS G_CDS: 1.01 Total: -40.22 kcal Atomic # 8 Polarization: -19.50 SS G_CDS: -0.61 Total: -20.11 kcal Atomic # 14 Polarization: 18.90 SS G_CDS: -5.03 Total: 13.87 kcal Atomic # 35 Polarization: -0.51 SS G_CDS: -2.29 Total: -2.81 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -30.61 -7.31 -37.91 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000060859731.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.709 kcal (2) G-P(sol) polarization free energy of solvation -30.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.915 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.795 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds