Wall clock time and date at job start Tue Mar 31 2020 20:11:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39714 * 120.18805 * 53.88908 * 3 2 1 5 5 C 1.37904 * 119.89127 * 179.97438 * 4 3 2 6 6 Br 1.89100 * 119.86495 * 179.97438 * 5 4 3 7 7 C 1.38600 * 120.27467 * 359.97438 * 5 4 3 8 8 C 1.38097 * 120.37812 * 0.30038 * 7 5 4 9 9 C 1.38641 * 120.10614 * 359.44080 * 8 7 5 10 10 O 1.35719 * 120.13963 * 180.27604 * 9 8 7 11 11 C 1.42899 * 117.00187 * 0.25651 * 10 9 8 12 12 C 1.50693 * 109.47339 * 179.97438 * 11 10 9 13 13 O 1.21284 * 120.00027 * 0.02562 * 12 11 10 14 14 N 1.34783 * 120.00164 * 180.02562 * 12 11 10 15 15 C 1.46502 * 119.99778 * 180.02562 * 14 12 11 16 16 C 1.50701 * 109.46739 * 180.02562 * 15 14 12 17 17 H 1.08007 * 119.99880 * 359.97438 * 16 15 14 18 18 C 1.37880 * 120.00012 * 179.97438 * 16 15 14 19 19 N 1.31514 * 119.99930 * 179.97438 * 18 16 15 20 20 Si 1.86793 * 119.99946 * 359.97438 * 18 16 15 21 21 H 1.48504 * 109.47098 * 89.99976 * 20 18 16 22 22 H 1.48500 * 109.47431 * 209.99918 * 20 18 16 23 23 H 1.48498 * 109.47300 * 330.00459 * 20 18 16 24 24 H 1.07995 * 120.05901 * 359.97438 * 4 3 2 25 25 H 1.08002 * 119.80652 * 180.02562 * 7 5 4 26 26 H 1.08007 * 119.94599 * 179.72542 * 8 7 5 27 27 H 1.08996 * 109.47153 * 300.00429 * 11 10 9 28 28 H 1.09001 * 109.46833 * 59.99885 * 11 10 9 29 29 H 0.96993 * 119.99805 * 0.02562 * 14 12 11 30 30 H 1.09004 * 109.47312 * 299.99697 * 15 14 12 31 31 H 1.08996 * 109.47304 * 60.00430 * 15 14 12 32 32 H 0.97001 * 119.99865 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2708 -0.7108 -0.9756 5 6 4.6499 -0.7055 -0.9702 6 35 5.6004 -1.6693 -2.2906 7 6 5.3421 0.0032 -0.0009 8 6 4.6588 0.7056 0.9721 9 6 3.2724 0.7156 0.9783 10 8 2.6002 1.4103 1.9309 11 6 3.3849 2.1148 2.8952 12 6 2.4734 2.8223 3.8645 13 8 1.2701 2.7317 3.7419 14 7 2.9952 3.5557 4.8677 15 6 2.1090 4.2430 5.8103 16 6 2.9366 4.9871 6.8264 17 1 4.0148 4.9513 6.7753 18 6 2.3173 5.7137 7.8212 19 7 3.0395 6.3627 8.7082 20 14 0.4524 5.7763 7.9090 21 1 -0.0407 4.6625 8.7585 22 1 0.0277 7.0723 8.4964 23 1 -0.1123 5.6436 6.5420 24 1 2.7352 -1.2639 -1.7328 25 1 6.4221 0.0025 -0.0040 26 1 5.2052 1.2519 1.7267 27 1 4.0145 1.4090 3.4369 28 1 4.0131 2.8467 2.3875 29 1 3.9575 3.6285 4.9654 30 1 1.4790 4.9485 5.2684 31 1 1.4811 3.5111 6.3183 32 1 2.6038 6.8741 9.4078 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000122393797.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:11:26 Heat of formation + Delta-G solvation = -13.246276 kcal Electronic energy + Delta-G solvation = -19377.888461 eV Core-core repulsion = 15964.612380 eV Total energy + Delta-G solvation = -3413.276081 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.95599 -39.21038 -37.80196 -36.55376 -34.49162 -32.56816 -32.44043 -31.97548 -29.97454 -28.87768 -27.15586 -24.58462 -23.00458 -21.96713 -20.28170 -19.61681 -18.10272 -17.69205 -16.70069 -16.65996 -15.93620 -15.66151 -15.13930 -14.87914 -14.75518 -14.31947 -13.92205 -13.59726 -13.36544 -13.08006 -13.04977 -12.87383 -12.48958 -12.40927 -12.18017 -11.75401 -11.72822 -11.12209 -10.84806 -10.76170 -10.75947 -10.04988 -9.66761 -9.61388 -9.46961 -8.87858 -8.70469 -8.36549 -6.29913 -4.33415 0.23036 0.57087 1.11794 2.35658 2.51160 2.56379 2.89106 3.21872 3.29183 3.37068 3.40281 3.54681 3.79489 4.21382 4.26370 4.27624 4.50623 4.73391 4.74604 4.86673 5.02681 5.05659 5.12101 5.24279 5.46556 5.55176 5.85850 6.61854 6.72908 6.93942 7.00370 7.24618 7.37252 7.95771 8.32386 8.58780 8.71264 9.29158 10.81679 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.028031 B = 0.002130 C = 0.001983 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 998.656158 B =13141.184299 C =14119.393160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.257 3.743 3 C -0.052 4.052 4 C -0.002 4.002 5 C -0.138 4.138 6 Br -0.041 7.041 7 C -0.017 4.017 8 C -0.206 4.206 9 C 0.198 3.802 10 O -0.275 6.275 11 C 0.035 3.965 12 C 0.500 3.500 13 O -0.531 6.531 14 N -0.698 5.698 15 C 0.222 3.778 16 C -0.547 4.547 17 H 0.081 0.919 18 C 0.079 3.921 19 N -0.890 5.890 20 Si 0.876 3.124 21 H -0.272 1.272 22 H -0.282 1.282 23 H -0.260 1.260 24 H 0.150 0.850 25 H 0.145 0.855 26 H 0.152 0.848 27 H 0.099 0.901 28 H 0.099 0.901 29 H 0.399 0.601 30 H 0.028 0.972 31 H 0.024 0.976 32 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.368 -16.623 -22.807 30.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.075 5.075 2 C -0.059 4.059 3 C -0.057 4.057 4 C -0.025 4.025 5 C -0.218 4.218 6 Br 0.044 6.956 7 C -0.038 4.038 8 C -0.226 4.226 9 C 0.147 3.853 10 O -0.185 6.185 11 C -0.044 4.044 12 C 0.283 3.717 13 O -0.408 6.408 14 N -0.348 5.348 15 C 0.100 3.900 16 C -0.585 4.585 17 H 0.099 0.901 18 C -0.125 4.125 19 N -0.526 5.526 20 Si 0.702 3.298 21 H -0.198 1.198 22 H -0.208 1.208 23 H -0.185 1.185 24 H 0.167 0.833 25 H 0.163 0.837 26 H 0.170 0.830 27 H 0.117 0.883 28 H 0.117 0.883 29 H 0.233 0.767 30 H 0.046 0.954 31 H 0.042 0.958 32 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 8.848 -16.866 -23.142 29.972 hybrid contribution 0.098 0.468 0.676 0.828 sum 8.946 -16.398 -22.466 29.218 Atomic orbital electron populations 1.81250 1.11746 1.07532 1.06979 1.25072 0.92039 0.94384 0.94421 1.15117 0.85141 1.06203 0.99282 1.20939 0.92062 0.94112 0.95360 1.21451 0.94095 1.06284 0.99947 1.96766 1.74431 1.73068 1.51294 1.21138 1.00821 0.91256 0.90566 1.21298 0.92046 1.06062 1.03145 1.19144 0.90584 0.88572 0.87034 1.86229 1.34699 1.60163 1.37401 1.22821 0.94288 0.96877 0.90374 1.19824 0.88912 0.80661 0.82287 1.90750 1.14951 1.61975 1.73117 1.46049 1.11277 1.49033 1.28487 1.19572 0.90622 0.92033 0.87746 1.21035 0.95006 1.31146 1.11286 0.90106 1.24779 0.98672 0.94293 0.94754 1.69868 1.35947 1.31215 1.15616 0.86833 0.85430 0.78023 0.79530 1.19755 1.20774 1.18479 0.83270 0.83702 0.83049 0.88266 0.88273 0.76743 0.95393 0.95845 0.92125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -6.37 18.54 41.84 0.78 -5.59 16 2 C 0.26 3.39 14.87 -22.47 -0.33 3.06 16 3 C -0.05 -0.52 5.75 -106.70 -0.61 -1.14 16 4 C 0.00 -0.02 9.49 -39.15 -0.37 -0.39 16 5 C -0.14 -0.92 6.22 -39.57 -0.25 -1.16 16 6 Br -0.04 -0.25 33.69 -68.01 -2.29 -2.54 16 7 C -0.02 -0.10 9.77 -39.50 -0.39 -0.49 16 8 C -0.21 -1.36 9.03 -39.48 -0.36 -1.72 16 9 C 0.20 1.97 6.69 -38.71 -0.26 1.71 16 10 O -0.28 -3.67 9.10 -38.77 -0.35 -4.02 16 11 C 0.03 0.39 5.22 36.00 0.19 0.58 16 12 C 0.50 8.77 7.91 -10.99 -0.09 8.68 16 13 O -0.53 -12.08 16.50 -14.36 -0.24 -12.31 16 14 N -0.70 -12.74 5.55 -61.47 -0.34 -13.08 16 15 C 0.22 5.19 4.50 -5.19 -0.02 5.17 16 16 C -0.55 -14.31 9.83 -34.44 -0.34 -14.65 16 17 H 0.08 2.17 7.84 -52.48 -0.41 1.76 16 18 C 0.08 2.18 5.47 -17.82 -0.10 2.08 16 19 N -0.89 -25.66 13.96 55.43 0.77 -24.88 16 20 Si 0.88 20.97 27.47 -169.99 -4.67 16.30 16 21 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 22 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 23 H -0.26 -6.23 6.54 56.52 0.37 -5.86 16 24 H 0.15 0.85 8.06 -52.49 -0.42 0.43 16 25 H 0.15 0.51 8.06 -52.49 -0.42 0.08 16 26 H 0.15 0.65 6.30 -52.48 -0.33 0.32 16 27 H 0.10 0.77 7.65 -51.93 -0.40 0.38 16 28 H 0.10 0.78 7.67 -51.93 -0.40 0.38 16 29 H 0.40 5.96 8.32 -40.82 -0.34 5.62 16 30 H 0.03 0.70 7.20 -51.93 -0.37 0.32 16 31 H 0.02 0.58 7.57 -51.93 -0.39 0.18 16 32 H 0.27 7.27 8.31 -40.82 -0.34 6.93 16 LS Contribution 317.26 15.07 4.78 4.78 Total: -1.00 -34.22 317.26 -7.14 -41.37 By element: Atomic # 1 Polarization: 0.92 SS G_CDS: -2.66 Total: -1.74 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: -2.92 Total: 1.73 kcal Atomic # 7 Polarization: -44.76 SS G_CDS: 1.21 Total: -43.56 kcal Atomic # 8 Polarization: -15.74 SS G_CDS: -0.59 Total: -16.33 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -4.67 Total: 16.30 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -2.29 Total: -2.54 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -34.22 -7.14 -41.37 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000122393797.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.120 kcal (2) G-P(sol) polarization free energy of solvation -34.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds